Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Chmp6P0C0A3 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Chmp6P0C0A3 Gm7205-201ENSMUST00000196032 1323 ntBASIC5.97□□□□□ -1.45
Chmp6P0C0A3 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Chmp6P0C0A3 Gm42436-201ENSMUST00000198804 3656 ntBASIC5.96□□□□□ -1.45
Chmp6P0C0A3 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
Chmp6P0C0A3 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
Chmp6P0C0A3 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Chmp6P0C0A3 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Chmp6P0C0A3 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC5.96□□□□□ -1.46
Chmp6P0C0A3 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Chmp6P0C0A3 Gm11826-201ENSMUST00000118781 438 ntBASIC5.96□□□□□ -1.46
Chmp6P0C0A3 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC5.96□□□□□ -1.46
Chmp6P0C0A3 Gm14485-201ENSMUST00000119489 493 ntBASIC5.96□□□□□ -1.46
Chmp6P0C0A3 Olfr1069-ps1-201ENSMUST00000120755 965 ntBASIC5.96□□□□□ -1.46
Chmp6P0C0A3 Gm13259-201ENSMUST00000120792 456 ntBASIC5.96□□□□□ -1.46
Chmp6P0C0A3 Gm12936-201ENSMUST00000121439 301 ntBASIC5.96□□□□□ -1.46
Chmp6P0C0A3 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC5.96□□□□□ -1.46
Chmp6P0C0A3 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Chmp6P0C0A3 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Chmp6P0C0A3 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Chmp6P0C0A3 Gm26665-201ENSMUST00000181378 839 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Chmp6P0C0A3 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Chmp6P0C0A3 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Chmp6P0C0A3 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Chmp6P0C0A3 Gm35037-201ENSMUST00000203144 506 ntTSL 3 BASIC5.96□□□□□ -1.46
Chmp6P0C0A3 Gm44580-201ENSMUST00000206333 877 ntBASIC5.96□□□□□ -1.46
Chmp6P0C0A3 Gm46192-201ENSMUST00000217894 326 ntBASIC5.96□□□□□ -1.46
Chmp6P0C0A3 Gm32526-201ENSMUST00000221878 981 ntBASIC5.96□□□□□ -1.46
Chmp6P0C0A3 AC163631.1-201ENSMUST00000225041 598 ntBASIC5.96□□□□□ -1.46
Chmp6P0C0A3 Plac1-201ENSMUST00000074861 1041 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Chmp6P0C0A3 n-R5s204-201ENSMUST00000082972 119 ntBASIC5.96□□□□□ -1.46
Chmp6P0C0A3 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC5.96□□□□□ -1.46
Chmp6P0C0A3 Taar4-201ENSMUST00000092660 1044 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Chmp6P0C0A3 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Chmp6P0C0A3 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
Chmp6P0C0A3 Olfr1330-203ENSMUST00000106361 1419 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Chmp6P0C0A3 Olfr895-202ENSMUST00000212156 1558 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
Chmp6P0C0A3 AC121997.2-201ENSMUST00000228095 2294 ntBASIC5.96□□□□□ -1.46
Chmp6P0C0A3 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Chmp6P0C0A3 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC5.96□□□□□ -1.46
Chmp6P0C0A3 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Chmp6P0C0A3 5330411O13Rik-201ENSMUST00000205759 1544 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Chmp6P0C0A3 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
Chmp6P0C0A3 Mir290a-201ENSMUST00000104627 83 ntBASIC5.95□□□□□ -1.46
Chmp6P0C0A3 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Chmp6P0C0A3 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Chmp6P0C0A3 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC5.95□□□□□ -1.46
Chmp6P0C0A3 Gm11561-201ENSMUST00000117429 417 ntBASIC5.95□□□□□ -1.46
Chmp6P0C0A3 Gm8822-201ENSMUST00000118948 2347 ntBASIC5.95□□□□□ -1.46
Chmp6P0C0A3 Mup-ps28-201ENSMUST00000120686 289 ntBASIC5.95□□□□□ -1.46
Chmp6P0C0A3 5330429C05Rik-201ENSMUST00000154615 487 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Chmp6P0C0A3 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC5.95□□□□□ -1.46
Chmp6P0C0A3 Gm25433-201ENSMUST00000158283 286 ntBASIC5.95□□□□□ -1.46
Chmp6P0C0A3 Gm23774-201ENSMUST00000158990 131 ntBASIC5.95□□□□□ -1.46
Chmp6P0C0A3 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC5.95□□□□□ -1.46
Chmp6P0C0A3 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Chmp6P0C0A3 Gm1972-201ENSMUST00000181606 964 ntBASIC5.95□□□□□ -1.46
Chmp6P0C0A3 Mir7674-201ENSMUST00000184964 63 ntBASIC5.95□□□□□ -1.46
Chmp6P0C0A3 Gm29201-201ENSMUST00000189120 431 ntBASIC5.95□□□□□ -1.46
Chmp6P0C0A3 Gm28507-201ENSMUST00000189737 703 ntBASIC5.95□□□□□ -1.46
Chmp6P0C0A3 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Chmp6P0C0A3 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Chmp6P0C0A3 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC5.95□□□□□ -1.46
Chmp6P0C0A3 Gm17992-201ENSMUST00000207346 1072 ntBASIC5.95□□□□□ -1.46
Chmp6P0C0A3 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC5.95□□□□□ -1.46
Chmp6P0C0A3 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC5.95□□□□□ -1.46
Chmp6P0C0A3 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Chmp6P0C0A3 AC124516.1-201ENSMUST00000221845 3544 ntBASIC5.95□□□□□ -1.46
Chmp6P0C0A3 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC5.95□□□□□ -1.46
Chmp6P0C0A3 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Chmp6P0C0A3 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Chmp6P0C0A3 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
Chmp6P0C0A3 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Chmp6P0C0A3 Mir331-201ENSMUST00000083673 96 ntBASIC5.95□□□□□ -1.46
Chmp6P0C0A3 Mir7-2-201ENSMUST00000083675 97 ntBASIC5.95□□□□□ -1.46
Chmp6P0C0A3 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Chmp6P0C0A3 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC5.95□□□□□ -1.46
Chmp6P0C0A3 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Chmp6P0C0A3 Gm28322-201ENSMUST00000185627 1475 ntBASIC5.95□□□□□ -1.46
Chmp6P0C0A3 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Chmp6P0C0A3 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Chmp6P0C0A3 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Chmp6P0C0A3 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Chmp6P0C0A3 AC117608.2-201ENSMUST00000224124 1363 ntBASIC5.94□□□□□ -1.46
Chmp6P0C0A3 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Chmp6P0C0A3 Gm37212-201ENSMUST00000192582 3650 ntBASIC5.94□□□□□ -1.46
Chmp6P0C0A3 Olfr979-202ENSMUST00000215523 3397 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Chmp6P0C0A3 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Chmp6P0C0A3 Gm42397-205ENSMUST00000208692 1449 ntTSL 5 BASIC5.94□□□□□ -1.46
Chmp6P0C0A3 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Chmp6P0C0A3 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Chmp6P0C0A3 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Chmp6P0C0A3 Gm43162-201ENSMUST00000198292 1770 ntBASIC5.94□□□□□ -1.46
Chmp6P0C0A3 C87499-202ENSMUST00000107142 672 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
Chmp6P0C0A3 Gm12985-201ENSMUST00000118376 183 ntBASIC5.94□□□□□ -1.46
Chmp6P0C0A3 Gm7189-201ENSMUST00000119811 429 ntBASIC5.94□□□□□ -1.46
Chmp6P0C0A3 Gm16200-201ENSMUST00000120385 331 ntBASIC5.94□□□□□ -1.46
Chmp6P0C0A3 Gm14620-201ENSMUST00000120656 383 ntBASIC5.94□□□□□ -1.46
Chmp6P0C0A3 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms