Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Ighv8-3-201ENSMUST00000194985 295 ntBASIC8.14□□□□□ -1.11
Ube3bQ9ES34 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC8.14□□□□□ -1.11
Ube3bQ9ES34 Gm17824-201ENSMUST00000197690 805 ntBASIC8.14□□□□□ -1.11
Ube3bQ9ES34 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC8.14□□□□□ -1.11
Ube3bQ9ES34 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ube3bQ9ES34 AC160114.1-201ENSMUST00000221930 365 ntBASIC8.14□□□□□ -1.11
Ube3bQ9ES34 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC8.14□□□□□ -1.11
Ube3bQ9ES34 AC164295.1-201ENSMUST00000224861 186 ntBASIC8.14□□□□□ -1.11
Ube3bQ9ES34 AC091237.1-201ENSMUST00000224911 637 ntBASIC8.14□□□□□ -1.11
Ube3bQ9ES34 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Ube3bQ9ES34 Olfr1351-201ENSMUST00000080730 960 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Ube3bQ9ES34 Gm25004-201ENSMUST00000083811 161 ntBASIC8.14□□□□□ -1.11
Ube3bQ9ES34 Gm29486-201ENSMUST00000088648 372 ntBASIC8.14□□□□□ -1.11
Ube3bQ9ES34 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ube3bQ9ES34 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC8.14□□□□□ -1.11
Ube3bQ9ES34 Olfr97-204ENSMUST00000214622 1573 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Ube3bQ9ES34 4930442L01Rik-201ENSMUST00000145865 2077 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ube3bQ9ES34 Uba1y-ps2-201ENSMUST00000190871 2544 ntBASIC8.13□□□□□ -1.11
Ube3bQ9ES34 Serpinb6e-201ENSMUST00000110275 1494 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Ube3bQ9ES34 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ube3bQ9ES34 Gm44224-201ENSMUST00000204131 1463 ntBASIC8.13□□□□□ -1.11
Ube3bQ9ES34 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ube3bQ9ES34 Alcam-207ENSMUST00000170035 1917 ntTSL 5 BASIC8.13□□□□□ -1.11
Ube3bQ9ES34 Pcsk2os1-201ENSMUST00000126735 4233 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Ube3bQ9ES34 Obox3-201ENSMUST00000086122 1890 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Ube3bQ9ES34 Gm13769-202ENSMUST00000214797 2340 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
Ube3bQ9ES34 Psg29-201ENSMUST00000075934 5445 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ube3bQ9ES34 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Ube3bQ9ES34 Epb41l2-219ENSMUST00000220290 4345 ntTSL 5 BASIC8.13□□□□□ -1.11
Ube3bQ9ES34 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Ube3bQ9ES34 Olfr990-ps1-201ENSMUST00000120485 904 ntBASIC8.13□□□□□ -1.11
Ube3bQ9ES34 Gm15158-201ENSMUST00000120577 570 ntBASIC8.13□□□□□ -1.11
Ube3bQ9ES34 Gm13555-201ENSMUST00000121668 319 ntBASIC8.13□□□□□ -1.11
Ube3bQ9ES34 Gm12540-201ENSMUST00000121938 319 ntBASIC8.13□□□□□ -1.11
Ube3bQ9ES34 Gm14821-201ENSMUST00000121975 435 ntBASIC8.13□□□□□ -1.11
Ube3bQ9ES34 Gm25294-201ENSMUST00000122791 104 ntBASIC8.13□□□□□ -1.11
Ube3bQ9ES34 Trp53cor1-201ENSMUST00000133221 2956 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Ube3bQ9ES34 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC8.13□□□□□ -1.11
Ube3bQ9ES34 Gm16298-201ENSMUST00000161107 420 ntBASIC8.13□□□□□ -1.11
Ube3bQ9ES34 Gm6726-201ENSMUST00000172786 681 ntBASIC8.13□□□□□ -1.11
Ube3bQ9ES34 Gm20648-201ENSMUST00000175815 328 ntBASIC8.13□□□□□ -1.11
Ube3bQ9ES34 Gm24300-201ENSMUST00000177809 109 ntBASIC8.13□□□□□ -1.11
Ube3bQ9ES34 Gm24017-201ENSMUST00000178726 109 ntBASIC8.13□□□□□ -1.11
Ube3bQ9ES34 Gm23952-201ENSMUST00000179380 109 ntBASIC8.13□□□□□ -1.11
Ube3bQ9ES34 Gm20932-201ENSMUST00000189115 694 ntBASIC8.13□□□□□ -1.11
Ube3bQ9ES34 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ube3bQ9ES34 Gm42443-201ENSMUST00000198084 1155 ntBASIC8.13□□□□□ -1.11
Ube3bQ9ES34 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC8.13□□□□□ -1.11
Ube3bQ9ES34 Gm43459-201ENSMUST00000202093 331 ntBASIC8.13□□□□□ -1.11
Ube3bQ9ES34 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ube3bQ9ES34 CT030030.1-201ENSMUST00000218809 152 ntBASIC8.13□□□□□ -1.11
Ube3bQ9ES34 Gm17849-201ENSMUST00000219788 853 ntBASIC8.13□□□□□ -1.11
Ube3bQ9ES34 Gm8613-201ENSMUST00000220383 1077 ntBASIC8.13□□□□□ -1.11
Ube3bQ9ES34 AC079644.2-201ENSMUST00000220581 322 ntBASIC8.13□□□□□ -1.11
Ube3bQ9ES34 AC126554.4-201ENSMUST00000221055 409 ntBASIC8.13□□□□□ -1.11
Ube3bQ9ES34 AC133598.3-204ENSMUST00000224260 767 ntBASIC8.13□□□□□ -1.11
Ube3bQ9ES34 AC123665.3-201ENSMUST00000228735 1216 ntBASIC8.13□□□□□ -1.11
Ube3bQ9ES34 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ube3bQ9ES34 Tsga13-201ENSMUST00000048580 1141 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ube3bQ9ES34 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Ube3bQ9ES34 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC8.13□□□□□ -1.11
Ube3bQ9ES34 Prdm11-202ENSMUST00000111274 11678 ntTSL 5 BASIC8.13□□□□□ -1.11
Ube3bQ9ES34 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Ube3bQ9ES34 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Ube3bQ9ES34 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Ube3bQ9ES34 Rprd2-201ENSMUST00000090791 7756 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ube3bQ9ES34 Gm45084-201ENSMUST00000207096 1957 ntBASIC8.13□□□□□ -1.11
Ube3bQ9ES34 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ube3bQ9ES34 Nr5a2-201ENSMUST00000027649 4733 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Ube3bQ9ES34 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Ube3bQ9ES34 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC8.13□□□□□ -1.11
Ube3bQ9ES34 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC8.13□□□□□ -1.11
Ube3bQ9ES34 Gm31520-202ENSMUST00000203574 1524 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Ube3bQ9ES34 Gm43588-201ENSMUST00000201862 2298 ntBASIC8.13□□□□□ -1.11
Ube3bQ9ES34 AC129208.1-201ENSMUST00000227474 2906 ntBASIC8.13□□□□□ -1.11
Ube3bQ9ES34 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC8.12□□□□□ -1.11
Ube3bQ9ES34 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ube3bQ9ES34 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ube3bQ9ES34 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ube3bQ9ES34 Serbp1-201ENSMUST00000042990 15474 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ube3bQ9ES34 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ube3bQ9ES34 Gm3555-201ENSMUST00000160287 1395 ntBASIC8.12□□□□□ -1.11
Ube3bQ9ES34 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC8.12□□□□□ -1.11
Ube3bQ9ES34 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ube3bQ9ES34 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC8.12□□□□□ -1.11
Ube3bQ9ES34 Gm31049-201ENSMUST00000201516 1302 ntBASIC8.12□□□□□ -1.11
Ube3bQ9ES34 AC139750.1-201ENSMUST00000223962 1300 ntBASIC8.12□□□□□ -1.11
Ube3bQ9ES34 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Ube3bQ9ES34 Plce1-201ENSMUST00000169713 9439 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ube3bQ9ES34 Gm43128-201ENSMUST00000202212 1621 ntBASIC8.12□□□□□ -1.11
Ube3bQ9ES34 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ube3bQ9ES34 Gm15149-201ENSMUST00000119370 360 ntBASIC8.12□□□□□ -1.11
Ube3bQ9ES34 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC8.12□□□□□ -1.11
Ube3bQ9ES34 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC8.12□□□□□ -1.11
Ube3bQ9ES34 Gm12322-201ENSMUST00000121605 389 ntBASIC8.12□□□□□ -1.11
Ube3bQ9ES34 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC8.12□□□□□ -1.11
Ube3bQ9ES34 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ube3bQ9ES34 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC8.12□□□□□ -1.11
Ube3bQ9ES34 1700093J21Rik-201ENSMUST00000143671 648 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ube3bQ9ES34 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 102.5 ms