Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Sf3a3Q9D554 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Sf3a3Q9D554 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Sf3a3Q9D554 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Sf3a3Q9D554 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sf3a3Q9D554 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
Sf3a3Q9D554 Gm21854-202ENSMUST00000190391 1480 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Sf3a3Q9D554 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC5.66□□□□□ -1.5
Sf3a3Q9D554 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Sf3a3Q9D554 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sf3a3Q9D554 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Sf3a3Q9D554 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sf3a3Q9D554 Gm14621-201ENSMUST00000117709 689 ntBASIC5.66□□□□□ -1.5
Sf3a3Q9D554 Gm15967-201ENSMUST00000120027 1116 ntBASIC5.66□□□□□ -1.5
Sf3a3Q9D554 Vamp7-ps-201ENSMUST00000120334 655 ntBASIC5.66□□□□□ -1.5
Sf3a3Q9D554 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Sf3a3Q9D554 Gm13531-201ENSMUST00000121893 543 ntBASIC5.66□□□□□ -1.5
Sf3a3Q9D554 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC5.66□□□□□ -1.5
Sf3a3Q9D554 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC5.66□□□□□ -1.5
Sf3a3Q9D554 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sf3a3Q9D554 Gm25826-201ENSMUST00000157090 137 ntBASIC5.66□□□□□ -1.5
Sf3a3Q9D554 Gm26170-201ENSMUST00000158419 148 ntBASIC5.66□□□□□ -1.5
Sf3a3Q9D554 Gm16125-201ENSMUST00000159003 339 ntBASIC5.66□□□□□ -1.5
Sf3a3Q9D554 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC5.66□□□□□ -1.5
Sf3a3Q9D554 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC5.66□□□□□ -1.5
Sf3a3Q9D554 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sf3a3Q9D554 Gm8032-201ENSMUST00000171009 574 ntBASIC5.66□□□□□ -1.5
Sf3a3Q9D554 Gm9671-201ENSMUST00000171502 547 ntBASIC5.66□□□□□ -1.5
Sf3a3Q9D554 Rps19-ps8-201ENSMUST00000180714 422 ntBASIC5.66□□□□□ -1.5
Sf3a3Q9D554 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC5.66□□□□□ -1.5
Sf3a3Q9D554 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sf3a3Q9D554 Gm19200-201ENSMUST00000182579 1001 ntBASIC5.66□□□□□ -1.5
Sf3a3Q9D554 Gm29525-201ENSMUST00000189844 699 ntBASIC5.66□□□□□ -1.5
Sf3a3Q9D554 Gm29523-201ENSMUST00000191415 699 ntBASIC5.66□□□□□ -1.5
Sf3a3Q9D554 Gm2367-201ENSMUST00000192374 472 ntBASIC5.66□□□□□ -1.5
Sf3a3Q9D554 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sf3a3Q9D554 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC5.66□□□□□ -1.5
Sf3a3Q9D554 Gm43967-201ENSMUST00000203787 301 ntBASIC5.66□□□□□ -1.5
Sf3a3Q9D554 1700051K13Rik-201ENSMUST00000204426 696 ntBASIC5.66□□□□□ -1.5
Sf3a3Q9D554 Gm6681-201ENSMUST00000205215 607 ntBASIC5.66□□□□□ -1.5
Sf3a3Q9D554 AC159476.2-201ENSMUST00000216221 418 ntBASIC5.66□□□□□ -1.5
Sf3a3Q9D554 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC5.66□□□□□ -1.5
Sf3a3Q9D554 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC5.66□□□□□ -1.5
Sf3a3Q9D554 AC164424.1-201ENSMUST00000221690 170 ntBASIC5.66□□□□□ -1.5
Sf3a3Q9D554 Gm5087-204ENSMUST00000225820 645 ntBASIC5.66□□□□□ -1.5
Sf3a3Q9D554 AC170810.1-201ENSMUST00000228267 672 ntBASIC5.66□□□□□ -1.5
Sf3a3Q9D554 Gm9985-201ENSMUST00000044101 510 ntBASIC5.66□□□□□ -1.5
Sf3a3Q9D554 Olfr459-201ENSMUST00000050412 1109 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Sf3a3Q9D554 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Sf3a3Q9D554 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC5.66□□□□□ -1.5
Sf3a3Q9D554 Olfr1431-201ENSMUST00000072316 939 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Sf3a3Q9D554 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
Sf3a3Q9D554 Plac1-201ENSMUST00000074861 1041 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sf3a3Q9D554 Olfr1465-201ENSMUST00000080142 924 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Sf3a3Q9D554 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Sf3a3Q9D554 Sprr2a3-201ENSMUST00000090872 682 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Sf3a3Q9D554 Gm17165-201ENSMUST00000096155 493 ntBASIC5.66□□□□□ -1.5
Sf3a3Q9D554 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sf3a3Q9D554 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sf3a3Q9D554 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Sf3a3Q9D554 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
Sf3a3Q9D554 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sf3a3Q9D554 Gm7697-201ENSMUST00000201500 2507 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sf3a3Q9D554 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sf3a3Q9D554 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Sf3a3Q9D554 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Sf3a3Q9D554 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Sf3a3Q9D554 Galnt1-208ENSMUST00000178605 3796 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Sf3a3Q9D554 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Sf3a3Q9D554 Olfr1215-203ENSMUST00000216271 2608 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
Sf3a3Q9D554 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Sf3a3Q9D554 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Sf3a3Q9D554 Gm43361-201ENSMUST00000196562 4690 ntBASIC5.65□□□□□ -1.5
Sf3a3Q9D554 Kif2a-201ENSMUST00000022204 5304 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Sf3a3Q9D554 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Sf3a3Q9D554 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Sf3a3Q9D554 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Sf3a3Q9D554 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Sf3a3Q9D554 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Sf3a3Q9D554 Gm24434-201ENSMUST00000104081 132 ntBASIC5.65□□□□□ -1.5
Sf3a3Q9D554 Krtap9-5-201ENSMUST00000105052 1077 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Sf3a3Q9D554 Gm15293-201ENSMUST00000110754 418 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Sf3a3Q9D554 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Sf3a3Q9D554 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Sf3a3Q9D554 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Sf3a3Q9D554 Gm22952-201ENSMUST00000116720 120 ntBASIC5.65□□□□□ -1.5
Sf3a3Q9D554 Gm10241-201ENSMUST00000117664 286 ntBASIC5.65□□□□□ -1.5
Sf3a3Q9D554 Gm15216-201ENSMUST00000118058 277 ntBASIC5.65□□□□□ -1.5
Sf3a3Q9D554 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC5.65□□□□□ -1.5
Sf3a3Q9D554 Gm11797-201ENSMUST00000121336 754 ntBASIC5.65□□□□□ -1.5
Sf3a3Q9D554 Gm12110-201ENSMUST00000121601 579 ntBASIC5.65□□□□□ -1.5
Sf3a3Q9D554 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Sf3a3Q9D554 Gm23587-201ENSMUST00000157658 84 ntBASIC5.65□□□□□ -1.5
Sf3a3Q9D554 Nrbf2-202ENSMUST00000159002 583 ntTSL 3 BASIC5.65□□□□□ -1.5
Sf3a3Q9D554 Gm22650-201ENSMUST00000175138 105 ntBASIC5.65□□□□□ -1.5
Sf3a3Q9D554 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC5.65□□□□□ -1.5
Sf3a3Q9D554 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
Sf3a3Q9D554 Gm17048-201ENSMUST00000179266 847 ntBASIC5.65□□□□□ -1.5
Sf3a3Q9D554 Gm27601-201ENSMUST00000184794 127 ntBASIC5.65□□□□□ -1.5
Sf3a3Q9D554 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC5.65□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms