Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 AC122290.1-201ENSMUST00000225631 1078 ntBASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 AC164618.1-201ENSMUST00000225769 592 ntBASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Tas2r103-201ENSMUST00000032317 939 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Cd160-201ENSMUST00000047702 1121 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Vmn1r83-201ENSMUST00000086229 996 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Vmn1r203-201ENSMUST00000091729 936 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Rhox3h-201ENSMUST00000096457 1053 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Gm37769-201ENSMUST00000193753 2369 ntBASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC6.41□□□□□ -1.38
Ddx56Q9D0R4 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Ddx56Q9D0R4 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Ddx56Q9D0R4 Gm37086-201ENSMUST00000193082 3452 ntBASIC6.41□□□□□ -1.38
Ddx56Q9D0R4 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Ddx56Q9D0R4 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Ddx56Q9D0R4 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Ddx56Q9D0R4 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Ddx56Q9D0R4 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Ddx56Q9D0R4 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Ddx56Q9D0R4 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Ddx56Q9D0R4 Gm12090-201ENSMUST00000118692 758 ntBASIC6.41□□□□□ -1.38
Ddx56Q9D0R4 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC6.41□□□□□ -1.38
Ddx56Q9D0R4 Gm4764-201ENSMUST00000130207 1233 ntBASIC6.41□□□□□ -1.38
Ddx56Q9D0R4 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC6.41□□□□□ -1.38
Ddx56Q9D0R4 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Ddx56Q9D0R4 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC6.41□□□□□ -1.38
Ddx56Q9D0R4 Gm6673-201ENSMUST00000166114 700 ntBASIC6.41□□□□□ -1.38
Ddx56Q9D0R4 Gm17121-201ENSMUST00000170414 847 ntBASIC6.41□□□□□ -1.38
Ddx56Q9D0R4 Gm24081-201ENSMUST00000175177 125 ntBASIC6.41□□□□□ -1.38
Ddx56Q9D0R4 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Ddx56Q9D0R4 Gm17222-201ENSMUST00000180135 847 ntBASIC6.41□□□□□ -1.38
Ddx56Q9D0R4 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC6.41□□□□□ -1.38
Ddx56Q9D0R4 Gm7634-201ENSMUST00000185778 553 ntBASIC6.41□□□□□ -1.38
Ddx56Q9D0R4 Gm18406-201ENSMUST00000185872 669 ntBASIC6.41□□□□□ -1.38
Ddx56Q9D0R4 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC6.41□□□□□ -1.38
Ddx56Q9D0R4 Gm37809-201ENSMUST00000195050 931 ntBASIC6.41□□□□□ -1.38
Ddx56Q9D0R4 Gm5694-201ENSMUST00000195648 641 ntBASIC6.41□□□□□ -1.38
Ddx56Q9D0R4 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC6.41□□□□□ -1.38
Ddx56Q9D0R4 Gm43768-201ENSMUST00000198380 1258 ntBASIC6.41□□□□□ -1.38
Ddx56Q9D0R4 Gm7832-201ENSMUST00000202613 880 ntBASIC6.41□□□□□ -1.38
Ddx56Q9D0R4 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC6.41□□□□□ -1.38
Ddx56Q9D0R4 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC6.41□□□□□ -1.38
Ddx56Q9D0R4 Gm5055-201ENSMUST00000215697 581 ntBASIC6.41□□□□□ -1.38
Ddx56Q9D0R4 AC159472.1-201ENSMUST00000218178 463 ntBASIC6.41□□□□□ -1.38
Ddx56Q9D0R4 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC6.41□□□□□ -1.38
Ddx56Q9D0R4 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC6.41□□□□□ -1.38
Ddx56Q9D0R4 AC154618.2-201ENSMUST00000228299 452 ntBASIC6.41□□□□□ -1.38
Ddx56Q9D0R4 Spink14-201ENSMUST00000060328 566 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Ddx56Q9D0R4 Gm5185-201ENSMUST00000080271 619 ntBASIC6.41□□□□□ -1.38
Ddx56Q9D0R4 Olfr1308-201ENSMUST00000099605 963 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Ddx56Q9D0R4 Gm15394-201ENSMUST00000119656 1308 ntBASIC6.41□□□□□ -1.38
Ddx56Q9D0R4 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Ddx56Q9D0R4 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Ddx56Q9D0R4 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Ddx56Q9D0R4 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Ddx56Q9D0R4 AC155710.1-201ENSMUST00000219913 1353 ntBASIC6.41□□□□□ -1.38
Ddx56Q9D0R4 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Ddx56Q9D0R4 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Ddx56Q9D0R4 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Ddx56Q9D0R4 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC6.41□□□□□ -1.38
Ddx56Q9D0R4 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Ddx56Q9D0R4 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Ddx56Q9D0R4 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Ddx56Q9D0R4 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC6.4□□□□□ -1.38
Ddx56Q9D0R4 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Ddx56Q9D0R4 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Ddx56Q9D0R4 AW046200-203ENSMUST00000211787 2479 ntBASIC6.4□□□□□ -1.38
Ddx56Q9D0R4 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Ddx56Q9D0R4 AC121960.2-201ENSMUST00000227349 3446 ntBASIC6.4□□□□□ -1.38
Ddx56Q9D0R4 Gm44193-201ENSMUST00000204822 2523 ntBASIC6.4□□□□□ -1.38
Ddx56Q9D0R4 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Ddx56Q9D0R4 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC6.4□□□□□ -1.38
Ddx56Q9D0R4 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Ddx56Q9D0R4 AC124446.1-201ENSMUST00000221027 2644 ntBASIC6.4□□□□□ -1.38
Ddx56Q9D0R4 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Ddx56Q9D0R4 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC6.4□□□□□ -1.38
Ddx56Q9D0R4 Gm24272-201ENSMUST00000102329 98 ntBASIC6.4□□□□□ -1.38
Ddx56Q9D0R4 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Ddx56Q9D0R4 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC6.4□□□□□ -1.38
Ddx56Q9D0R4 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
Ddx56Q9D0R4 Mup-ps13-201ENSMUST00000120662 545 ntBASIC6.4□□□□□ -1.38
Ddx56Q9D0R4 Mup-ps1-201ENSMUST00000120720 544 ntBASIC6.4□□□□□ -1.38
Ddx56Q9D0R4 Gm12451-201ENSMUST00000121636 633 ntBASIC6.4□□□□□ -1.38
Ddx56Q9D0R4 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Ddx56Q9D0R4 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC6.4□□□□□ -1.38
Ddx56Q9D0R4 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC6.4□□□□□ -1.38
Ddx56Q9D0R4 Gm17198-201ENSMUST00000171792 1154 ntBASIC6.4□□□□□ -1.38
Ddx56Q9D0R4 Gm24155-201ENSMUST00000175259 110 ntBASIC6.4□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms