Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC6.32□□□□□ -1.4
Smc1aQ9CU62 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Smc1aQ9CU62 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Smc1aQ9CU62 Gm38284-201ENSMUST00000194803 4539 ntBASIC6.31□□□□□ -1.4
Smc1aQ9CU62 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC6.31□□□□□ -1.4
Smc1aQ9CU62 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Smc1aQ9CU62 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Smc1aQ9CU62 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC6.31□□□□□ -1.4
Smc1aQ9CU62 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Smc1aQ9CU62 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC6.31□□□□□ -1.4
Smc1aQ9CU62 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Smc1aQ9CU62 Gm8501-201ENSMUST00000117684 432 ntBASIC6.31□□□□□ -1.4
Smc1aQ9CU62 Gm13771-201ENSMUST00000117988 238 ntBASIC6.31□□□□□ -1.4
Smc1aQ9CU62 Gm14842-201ENSMUST00000119577 269 ntBASIC6.31□□□□□ -1.4
Smc1aQ9CU62 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Smc1aQ9CU62 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC6.31□□□□□ -1.4
Smc1aQ9CU62 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC6.31□□□□□ -1.4
Smc1aQ9CU62 Gm24216-201ENSMUST00000158259 117 ntBASIC6.31□□□□□ -1.4
Smc1aQ9CU62 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Smc1aQ9CU62 Gm8032-201ENSMUST00000171009 574 ntBASIC6.31□□□□□ -1.4
Smc1aQ9CU62 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC6.31□□□□□ -1.4
Smc1aQ9CU62 Gm8581-201ENSMUST00000188636 890 ntBASIC6.31□□□□□ -1.4
Smc1aQ9CU62 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC6.31□□□□□ -1.4
Smc1aQ9CU62 Gm20940-201ENSMUST00000197308 360 ntBASIC6.31□□□□□ -1.4
Smc1aQ9CU62 Gm42961-201ENSMUST00000202023 181 ntBASIC6.31□□□□□ -1.4
Smc1aQ9CU62 Olfr519-202ENSMUST00000202706 945 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Smc1aQ9CU62 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC6.31□□□□□ -1.4
Smc1aQ9CU62 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC6.31□□□□□ -1.4
Smc1aQ9CU62 Gm19186-201ENSMUST00000219922 333 ntBASIC6.31□□□□□ -1.4
Smc1aQ9CU62 AC164618.1-201ENSMUST00000225769 592 ntBASIC6.31□□□□□ -1.4
Smc1aQ9CU62 Magea4-201ENSMUST00000048675 948 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Smc1aQ9CU62 Gm17165-201ENSMUST00000096155 493 ntBASIC6.31□□□□□ -1.4
Smc1aQ9CU62 Olfr592-201ENSMUST00000098207 939 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Smc1aQ9CU62 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Smc1aQ9CU62 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Smc1aQ9CU62 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Smc1aQ9CU62 Olfr972-202ENSMUST00000215303 1641 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
Smc1aQ9CU62 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Smc1aQ9CU62 Gm43389-201ENSMUST00000196080 2595 ntBASIC6.31□□□□□ -1.4
Smc1aQ9CU62 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Smc1aQ9CU62 AC130827.1-201ENSMUST00000220476 3850 ntBASIC6.31□□□□□ -1.4
Smc1aQ9CU62 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
Smc1aQ9CU62 Olfr895-202ENSMUST00000212156 1558 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
Smc1aQ9CU62 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Smc1aQ9CU62 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Smc1aQ9CU62 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Smc1aQ9CU62 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Smc1aQ9CU62 Gm19125-201ENSMUST00000188408 1383 ntBASIC6.31□□□□□ -1.4
Smc1aQ9CU62 Olfr657-202ENSMUST00000213297 1948 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Smc1aQ9CU62 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Smc1aQ9CU62 AC122357.3-201ENSMUST00000221260 2293 ntBASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm38029-201ENSMUST00000192669 2090 ntBASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm8750-201ENSMUST00000173278 1537 ntBASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm7680-201ENSMUST00000216198 1348 ntBASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Muc15-201ENSMUST00000090332 1318 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm28432-201ENSMUST00000185237 1499 ntTSL 5 BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm28081-201ENSMUST00000185321 1497 ntTSL 5 BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm29473-201ENSMUST00000185588 1497 ntTSL 5 BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm29662-201ENSMUST00000185620 1499 ntTSL 5 BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm28082-201ENSMUST00000185683 1499 ntTSL 5 BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm29061-201ENSMUST00000185900 1499 ntTSL 5 BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm28679-201ENSMUST00000186013 1499 ntTSL 5 BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm29565-202ENSMUST00000186260 1499 ntTSL 5 BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm28338-202ENSMUST00000186269 1499 ntTSL 5 BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm28668-202ENSMUST00000186549 1499 ntTSL 5 BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm29321-201ENSMUST00000186727 1499 ntTSL 5 BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm28135-201ENSMUST00000186847 1499 ntTSL 5 BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm29158-201ENSMUST00000186883 1494 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm28291-202ENSMUST00000186921 1499 ntTSL 5 BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm29393-201ENSMUST00000187002 1499 ntTSL 5 BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm29219-201ENSMUST00000187224 1499 ntTSL 5 BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm29547-201ENSMUST00000187258 1499 ntTSL 5 BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm28260-201ENSMUST00000187337 1499 ntTSL 5 BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm28225-201ENSMUST00000187730 1499 ntTSL 5 BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm29569-202ENSMUST00000187955 1499 ntTSL 5 BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm29625-201ENSMUST00000188079 1499 ntTSL 5 BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm28735-202ENSMUST00000188159 1499 ntTSL 5 BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm29297-202ENSMUST00000188186 1499 ntTSL 5 BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm29457-201ENSMUST00000188224 1499 ntTSL 5 BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm29190-201ENSMUST00000188255 1499 ntTSL 5 BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm28236-203ENSMUST00000188311 1499 ntTSL 5 BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm28197-203ENSMUST00000188434 1499 ntTSL 5 BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm29070-202ENSMUST00000188541 1499 ntTSL 5 BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm28545-201ENSMUST00000188667 1499 ntTSL 5 BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm29265-201ENSMUST00000188697 1499 ntTSL 5 BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm28947-203ENSMUST00000188701 1499 ntTSL 5 BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm29616-201ENSMUST00000188777 1499 ntTSL 5 BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm29162-202ENSMUST00000188893 1499 ntTSL 5 BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm28606-201ENSMUST00000188938 1499 ntTSL 5 BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm29338-201ENSMUST00000189318 1499 ntTSL 5 BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm29425-202ENSMUST00000189421 1499 ntTSL 5 BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm29271-203ENSMUST00000189943 1499 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm29381-201ENSMUST00000190168 1497 ntTSL 5 BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm28454-203ENSMUST00000190183 1495 ntTSL 5 BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm28842-202ENSMUST00000190289 1499 ntTSL 5 BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm28259-201ENSMUST00000190319 1497 ntTSL 5 BASIC6.3□□□□□ -1.4
Smc1aQ9CU62 Gm28318-203ENSMUST00000190347 1499 ntTSL 5 BASIC6.3□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms