Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm11533-201ENSMUST00000120287 477 ntBASIC5.65□□□□□ -1.5
Ccdc28aQ8CEI3 Gm15618-201ENSMUST00000121610 452 ntBASIC5.65□□□□□ -1.5
Ccdc28aQ8CEI3 Mir1903-201ENSMUST00000122574 80 ntBASIC5.65□□□□□ -1.5
Ccdc28aQ8CEI3 Gm11962-201ENSMUST00000145746 255 ntBASIC5.65□□□□□ -1.5
Ccdc28aQ8CEI3 Gm16139-201ENSMUST00000160015 420 ntBASIC5.65□□□□□ -1.5
Ccdc28aQ8CEI3 Vmn1r91-201ENSMUST00000165330 924 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Ccdc28aQ8CEI3 Gm22411-201ENSMUST00000175462 126 ntBASIC5.65□□□□□ -1.5
Ccdc28aQ8CEI3 Gm22002-201ENSMUST00000175622 125 ntBASIC5.65□□□□□ -1.5
Ccdc28aQ8CEI3 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC5.65□□□□□ -1.5
Ccdc28aQ8CEI3 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Ccdc28aQ8CEI3 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Ccdc28aQ8CEI3 Gm28507-201ENSMUST00000189737 703 ntBASIC5.65□□□□□ -1.5
Ccdc28aQ8CEI3 Gm37492-201ENSMUST00000191948 376 ntBASIC5.65□□□□□ -1.5
Ccdc28aQ8CEI3 Gm36999-201ENSMUST00000192756 1046 ntBASIC5.65□□□□□ -1.5
Ccdc28aQ8CEI3 Gm18865-201ENSMUST00000193011 1171 ntBASIC5.65□□□□□ -1.5
Ccdc28aQ8CEI3 Gm43392-201ENSMUST00000196560 434 ntBASIC5.65□□□□□ -1.5
Ccdc28aQ8CEI3 Gm18482-201ENSMUST00000202405 760 ntBASIC5.65□□□□□ -1.5
Ccdc28aQ8CEI3 Tas2r145-ps3-201ENSMUST00000204526 992 ntBASIC5.65□□□□□ -1.5
Ccdc28aQ8CEI3 Gm4374-201ENSMUST00000204929 424 ntBASIC5.65□□□□□ -1.5
Ccdc28aQ8CEI3 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Ccdc28aQ8CEI3 Gm10709-201ENSMUST00000213318 480 ntBASIC5.65□□□□□ -1.5
Ccdc28aQ8CEI3 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Ccdc28aQ8CEI3 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC5.65□□□□□ -1.5
Ccdc28aQ8CEI3 AC102291.1-201ENSMUST00000227164 529 ntBASIC5.65□□□□□ -1.5
Ccdc28aQ8CEI3 AC154239.1-201ENSMUST00000228565 406 ntBASIC5.65□□□□□ -1.5
Ccdc28aQ8CEI3 Gm31258-201ENSMUST00000194532 3297 ntBASIC5.65□□□□□ -1.51
Ccdc28aQ8CEI3 Epha7-201ENSMUST00000029964 6746 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
Ccdc28aQ8CEI3 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Ccdc28aQ8CEI3 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc28aQ8CEI3 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc28aQ8CEI3 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc28aQ8CEI3 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc28aQ8CEI3 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc28aQ8CEI3 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc28aQ8CEI3 AC144772.1-201ENSMUST00000226372 2398 ntBASIC5.64□□□□□ -1.51
Ccdc28aQ8CEI3 Gm18716-201ENSMUST00000204507 1603 ntBASIC5.64□□□□□ -1.51
Ccdc28aQ8CEI3 Gm37959-201ENSMUST00000191700 2897 ntBASIC5.64□□□□□ -1.51
Ccdc28aQ8CEI3 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
Ccdc28aQ8CEI3 Gm9112-201ENSMUST00000113610 420 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
Ccdc28aQ8CEI3 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC5.64□□□□□ -1.51
Ccdc28aQ8CEI3 Gm22959-201ENSMUST00000122514 303 ntBASIC5.64□□□□□ -1.51
Ccdc28aQ8CEI3 Gm14092-201ENSMUST00000136794 617 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc28aQ8CEI3 Tbata-207ENSMUST00000140456 953 ntTSL 5 BASIC5.64□□□□□ -1.51
Ccdc28aQ8CEI3 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC5.64□□□□□ -1.51
Ccdc28aQ8CEI3 Gm23354-201ENSMUST00000158426 104 ntBASIC5.64□□□□□ -1.51
Ccdc28aQ8CEI3 Gm24175-201ENSMUST00000158931 129 ntBASIC5.64□□□□□ -1.51
Ccdc28aQ8CEI3 Gm8919-201ENSMUST00000182028 1014 ntBASIC5.64□□□□□ -1.51
Ccdc28aQ8CEI3 Gm27754-201ENSMUST00000183340 126 ntBASIC5.64□□□□□ -1.51
Ccdc28aQ8CEI3 Mir6361-201ENSMUST00000185079 101 ntBASIC5.64□□□□□ -1.51
Ccdc28aQ8CEI3 Gm28195-201ENSMUST00000186992 372 ntBASIC5.64□□□□□ -1.51
Ccdc28aQ8CEI3 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc28aQ8CEI3 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC5.64□□□□□ -1.51
Ccdc28aQ8CEI3 Gm37871-201ENSMUST00000194973 688 ntBASIC5.64□□□□□ -1.51
Ccdc28aQ8CEI3 Gm43055-201ENSMUST00000198859 879 ntTSL 3 BASIC5.64□□□□□ -1.51
Ccdc28aQ8CEI3 Clec2j-202ENSMUST00000203658 606 ntBASIC5.64□□□□□ -1.51
Ccdc28aQ8CEI3 Gm7890-201ENSMUST00000204877 601 ntBASIC5.64□□□□□ -1.51
Ccdc28aQ8CEI3 Olfr878-202ENSMUST00000212878 1064 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Ccdc28aQ8CEI3 Gm19174-201ENSMUST00000216944 956 ntBASIC5.64□□□□□ -1.51
Ccdc28aQ8CEI3 AC126685.1-201ENSMUST00000221001 121 ntBASIC5.64□□□□□ -1.51
Ccdc28aQ8CEI3 AC159205.4-201ENSMUST00000225964 704 ntBASIC5.64□□□□□ -1.51
Ccdc28aQ8CEI3 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Ccdc28aQ8CEI3 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Ccdc28aQ8CEI3 Gm22456-201ENSMUST00000082578 125 ntBASIC5.64□□□□□ -1.51
Ccdc28aQ8CEI3 Mir375-201ENSMUST00000083682 64 ntBASIC5.64□□□□□ -1.51
Ccdc28aQ8CEI3 Olfr878-201ENSMUST00000086061 1065 ntBASIC5.64□□□□□ -1.51
Ccdc28aQ8CEI3 Olfr1016-201ENSMUST00000099915 930 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Ccdc28aQ8CEI3 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc28aQ8CEI3 Gm43389-201ENSMUST00000196080 2595 ntBASIC5.64□□□□□ -1.51
Ccdc28aQ8CEI3 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc28aQ8CEI3 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC5.64□□□□□ -1.51
Ccdc28aQ8CEI3 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC5.64□□□□□ -1.51
Ccdc28aQ8CEI3 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC5.64□□□□□ -1.51
Ccdc28aQ8CEI3 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Ccdc28aQ8CEI3 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC5.64□□□□□ -1.51
Ccdc28aQ8CEI3 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc28aQ8CEI3 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Ccdc28aQ8CEI3 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
Ccdc28aQ8CEI3 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
Ccdc28aQ8CEI3 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Ccdc28aQ8CEI3 Smc5-206ENSMUST00000226111 3265 ntBASIC5.63□□□□□ -1.51
Ccdc28aQ8CEI3 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ccdc28aQ8CEI3 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ccdc28aQ8CEI3 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Ccdc28aQ8CEI3 Mga-201ENSMUST00000046717 11982 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Ccdc28aQ8CEI3 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ccdc28aQ8CEI3 Gm44424-201ENSMUST00000203438 1826 ntBASIC5.63□□□□□ -1.51
Ccdc28aQ8CEI3 Ear-ps2-201ENSMUST00000100689 466 ntBASIC5.63□□□□□ -1.51
Ccdc28aQ8CEI3 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Ccdc28aQ8CEI3 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Ccdc28aQ8CEI3 Gm11341-201ENSMUST00000122316 447 ntBASIC5.63□□□□□ -1.51
Ccdc28aQ8CEI3 Zfp783-203ENSMUST00000130463 537 ntTSL 2 BASIC5.63□□□□□ -1.51
Ccdc28aQ8CEI3 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC5.63□□□□□ -1.51
Ccdc28aQ8CEI3 Olfr75-ps1-201ENSMUST00000135477 938 ntBASIC5.63□□□□□ -1.51
Ccdc28aQ8CEI3 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC5.63□□□□□ -1.51
Ccdc28aQ8CEI3 Gm15812-201ENSMUST00000162331 748 ntBASIC5.63□□□□□ -1.51
Ccdc28aQ8CEI3 Gm17223-201ENSMUST00000171413 481 ntBASIC5.63□□□□□ -1.51
Ccdc28aQ8CEI3 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Ccdc28aQ8CEI3 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Ccdc28aQ8CEI3 Mir7212-201ENSMUST00000184098 61 ntBASIC5.63□□□□□ -1.51
Ccdc28aQ8CEI3 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC5.63□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms