Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Trub1Q8C0D0 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC5.6□□□□□ -1.51
Trub1Q8C0D0 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Trub1Q8C0D0 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Trub1Q8C0D0 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Trub1Q8C0D0 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Trub1Q8C0D0 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Trub1Q8C0D0 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Trub1Q8C0D0 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Trub1Q8C0D0 Dnah3-204ENSMUST00000209154 12265 ntAPPRIS P5 TSL 5 BASIC5.59□□□□□ -1.51
Trub1Q8C0D0 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Trub1Q8C0D0 Gm7980-201ENSMUST00000168107 1403 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Trub1Q8C0D0 AC136019.1-201ENSMUST00000226503 1412 ntBASIC5.59□□□□□ -1.51
Trub1Q8C0D0 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Trub1Q8C0D0 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC5.59□□□□□ -1.51
Trub1Q8C0D0 AC117608.2-201ENSMUST00000224124 1363 ntBASIC5.59□□□□□ -1.51
Trub1Q8C0D0 Gm43210-201ENSMUST00000196743 6152 ntBASIC5.59□□□□□ -1.51
Trub1Q8C0D0 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
Trub1Q8C0D0 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
Trub1Q8C0D0 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Trub1Q8C0D0 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Trub1Q8C0D0 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
Trub1Q8C0D0 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
Trub1Q8C0D0 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Trub1Q8C0D0 Gm22592-201ENSMUST00000104242 131 ntBASIC5.59□□□□□ -1.51
Trub1Q8C0D0 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Trub1Q8C0D0 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC5.59□□□□□ -1.51
Trub1Q8C0D0 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC5.59□□□□□ -1.51
Trub1Q8C0D0 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC5.59□□□□□ -1.51
Trub1Q8C0D0 Gm22518-201ENSMUST00000158267 68 ntBASIC5.59□□□□□ -1.51
Trub1Q8C0D0 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Trub1Q8C0D0 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC5.59□□□□□ -1.51
Trub1Q8C0D0 Mir7211-201ENSMUST00000184071 63 ntBASIC5.59□□□□□ -1.51
Trub1Q8C0D0 Gm3605-201ENSMUST00000185858 440 ntBASIC5.59□□□□□ -1.51
Trub1Q8C0D0 Gm38015-201ENSMUST00000193048 188 ntBASIC5.59□□□□□ -1.51
Trub1Q8C0D0 Gm34768-201ENSMUST00000193884 565 ntBASIC5.59□□□□□ -1.51
Trub1Q8C0D0 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Trub1Q8C0D0 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC5.59□□□□□ -1.51
Trub1Q8C0D0 Gm44132-201ENSMUST00000205142 151 ntBASIC5.59□□□□□ -1.51
Trub1Q8C0D0 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC5.59□□□□□ -1.51
Trub1Q8C0D0 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC5.59□□□□□ -1.51
Trub1Q8C0D0 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC5.59□□□□□ -1.51
Trub1Q8C0D0 Gm6477-201ENSMUST00000217098 764 ntBASIC5.59□□□□□ -1.51
Trub1Q8C0D0 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC5.59□□□□□ -1.51
Trub1Q8C0D0 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Trub1Q8C0D0 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
Trub1Q8C0D0 Mbd3l1-201ENSMUST00000069218 850 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Trub1Q8C0D0 Cd200r3-202ENSMUST00000077178 767 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Trub1Q8C0D0 Gm23511-201ENSMUST00000083084 164 ntBASIC5.59□□□□□ -1.51
Trub1Q8C0D0 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Trub1Q8C0D0 Gm37181-201ENSMUST00000192513 1727 ntBASIC5.59□□□□□ -1.51
Trub1Q8C0D0 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
Trub1Q8C0D0 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC5.59□□□□□ -1.52
Trub1Q8C0D0 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Trub1Q8C0D0 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
Trub1Q8C0D0 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Trub1Q8C0D0 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Trub1Q8C0D0 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC5.59□□□□□ -1.52
Trub1Q8C0D0 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Trub1Q8C0D0 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
Trub1Q8C0D0 Olfr1306-202ENSMUST00000214844 1893 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Trub1Q8C0D0 CT025556.1-201ENSMUST00000222965 1884 ntBASIC5.58□□□□□ -1.52
Trub1Q8C0D0 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
Trub1Q8C0D0 Gm45172-201ENSMUST00000206054 1301 ntBASIC5.58□□□□□ -1.52
Trub1Q8C0D0 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC5.58□□□□□ -1.52
Trub1Q8C0D0 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC5.58□□□□□ -1.52
Trub1Q8C0D0 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Trub1Q8C0D0 Gm25422-201ENSMUST00000104219 129 ntBASIC5.58□□□□□ -1.52
Trub1Q8C0D0 B4galt4-203ENSMUST00000114710 837 ntTSL 3 BASIC5.58□□□□□ -1.52
Trub1Q8C0D0 Gm12131-201ENSMUST00000117479 359 ntBASIC5.58□□□□□ -1.52
Trub1Q8C0D0 Gm15078-201ENSMUST00000118371 782 ntBASIC5.58□□□□□ -1.52
Trub1Q8C0D0 Gm12813-201ENSMUST00000119615 902 ntBASIC5.58□□□□□ -1.52
Trub1Q8C0D0 Gm12413-201ENSMUST00000121508 312 ntBASIC5.58□□□□□ -1.52
Trub1Q8C0D0 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC5.58□□□□□ -1.52
Trub1Q8C0D0 Gm17511-201ENSMUST00000172206 342 ntBASIC5.58□□□□□ -1.52
Trub1Q8C0D0 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Trub1Q8C0D0 Gm28941-201ENSMUST00000185536 1017 ntBASIC5.58□□□□□ -1.52
Trub1Q8C0D0 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Trub1Q8C0D0 Gm38360-201ENSMUST00000195130 454 ntBASIC5.58□□□□□ -1.52
Trub1Q8C0D0 Gm45700-201ENSMUST00000205866 347 ntBASIC5.58□□□□□ -1.52
Trub1Q8C0D0 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC5.58□□□□□ -1.52
Trub1Q8C0D0 Gm18255-201ENSMUST00000211316 765 ntBASIC5.58□□□□□ -1.52
Trub1Q8C0D0 AC140409.4-201ENSMUST00000215757 538 ntBASIC5.58□□□□□ -1.52
Trub1Q8C0D0 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC5.58□□□□□ -1.52
Trub1Q8C0D0 CT030238.4-203ENSMUST00000227343 836 ntBASIC5.58□□□□□ -1.52
Trub1Q8C0D0 AC154436.2-201ENSMUST00000227408 208 ntBASIC5.58□□□□□ -1.52
Trub1Q8C0D0 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trub1Q8C0D0 Olfr1276-201ENSMUST00000073322 939 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Trub1Q8C0D0 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC5.58□□□□□ -1.52
Trub1Q8C0D0 Olfr263-201ENSMUST00000096006 1087 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Trub1Q8C0D0 AC124579.1-201ENSMUST00000223468 2520 ntBASIC5.58□□□□□ -1.52
Trub1Q8C0D0 AC154640.4-201ENSMUST00000226647 4640 ntBASIC5.58□□□□□ -1.52
Trub1Q8C0D0 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Trub1Q8C0D0 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC5.58□□□□□ -1.52
Trub1Q8C0D0 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trub1Q8C0D0 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trub1Q8C0D0 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Trub1Q8C0D0 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Trub1Q8C0D0 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC5.58□□□□□ -1.52
Trub1Q8C0D0 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms