Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
Ddx55Q6ZPL9 Gm2011-203ENSMUST00000203750 435 ntBASIC6.72□□□□□ -1.33
Ddx55Q6ZPL9 Gm18850-201ENSMUST00000211578 388 ntBASIC6.72□□□□□ -1.33
Ddx55Q6ZPL9 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC6.72□□□□□ -1.33
Ddx55Q6ZPL9 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC6.72□□□□□ -1.33
Ddx55Q6ZPL9 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC6.72□□□□□ -1.33
Ddx55Q6ZPL9 Gm4928-201ENSMUST00000219622 850 ntBASIC6.72□□□□□ -1.33
Ddx55Q6ZPL9 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC6.72□□□□□ -1.33
Ddx55Q6ZPL9 AL807824.1-201ENSMUST00000223151 183 ntBASIC6.72□□□□□ -1.33
Ddx55Q6ZPL9 AL589696.1-201ENSMUST00000225711 330 ntBASIC6.72□□□□□ -1.33
Ddx55Q6ZPL9 Tas2r103-201ENSMUST00000032317 939 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Ddx55Q6ZPL9 Clec2j-201ENSMUST00000032517 515 ntBASIC6.72□□□□□ -1.33
Ddx55Q6ZPL9 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ddx55Q6ZPL9 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ddx55Q6ZPL9 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ddx55Q6ZPL9 Gm18300-201ENSMUST00000192792 1406 ntBASIC6.72□□□□□ -1.33
Ddx55Q6ZPL9 Gm37186-201ENSMUST00000195629 2861 ntBASIC6.72□□□□□ -1.33
Ddx55Q6ZPL9 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ddx55Q6ZPL9 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Ddx55Q6ZPL9 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
Ddx55Q6ZPL9 Olfr610-203ENSMUST00000217627 1643 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Ddx55Q6ZPL9 Gm45117-201ENSMUST00000207250 1774 ntBASIC6.72□□□□□ -1.33
Ddx55Q6ZPL9 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Ddx55Q6ZPL9 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC6.72□□□□□ -1.33
Ddx55Q6ZPL9 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Ddx55Q6ZPL9 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ddx55Q6ZPL9 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Ddx55Q6ZPL9 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Ddx55Q6ZPL9 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
Ddx55Q6ZPL9 Olfr1214-203ENSMUST00000217469 1955 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Ddx55Q6ZPL9 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
Ddx55Q6ZPL9 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Ddx55Q6ZPL9 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Ddx55Q6ZPL9 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
Ddx55Q6ZPL9 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC6.71□□□□□ -1.33
Ddx55Q6ZPL9 Gm8141-201ENSMUST00000190856 1723 ntBASIC6.71□□□□□ -1.34
Ddx55Q6ZPL9 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC6.71□□□□□ -1.34
Ddx55Q6ZPL9 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ddx55Q6ZPL9 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Ddx55Q6ZPL9 Gm37086-201ENSMUST00000193082 3452 ntBASIC6.71□□□□□ -1.34
Ddx55Q6ZPL9 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Ddx55Q6ZPL9 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC6.71□□□□□ -1.34
Ddx55Q6ZPL9 Mir678-201ENSMUST00000102114 84 ntBASIC6.71□□□□□ -1.34
Ddx55Q6ZPL9 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Ddx55Q6ZPL9 Gm2199-201ENSMUST00000119065 874 ntBASIC6.71□□□□□ -1.34
Ddx55Q6ZPL9 Gm14175-201ENSMUST00000119835 241 ntBASIC6.71□□□□□ -1.34
Ddx55Q6ZPL9 Atf1-ps-201ENSMUST00000120608 810 ntBASIC6.71□□□□□ -1.34
Ddx55Q6ZPL9 Gm7670-201ENSMUST00000121272 641 ntBASIC6.71□□□□□ -1.34
Ddx55Q6ZPL9 Gm12685-201ENSMUST00000121702 214 ntBASIC6.71□□□□□ -1.34
Ddx55Q6ZPL9 Olfr1134-202ENSMUST00000135875 1291 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Ddx55Q6ZPL9 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC6.71□□□□□ -1.34
Ddx55Q6ZPL9 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC6.71□□□□□ -1.34
Ddx55Q6ZPL9 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC6.71□□□□□ -1.34
Ddx55Q6ZPL9 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC6.71□□□□□ -1.34
Ddx55Q6ZPL9 Gm24692-201ENSMUST00000157761 146 ntBASIC6.71□□□□□ -1.34
Ddx55Q6ZPL9 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC6.71□□□□□ -1.34
Ddx55Q6ZPL9 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC6.71□□□□□ -1.34
Ddx55Q6ZPL9 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
Ddx55Q6ZPL9 Gm8358-201ENSMUST00000167222 555 ntBASIC6.71□□□□□ -1.34
Ddx55Q6ZPL9 Gm17511-201ENSMUST00000172206 342 ntBASIC6.71□□□□□ -1.34
Ddx55Q6ZPL9 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC6.71□□□□□ -1.34
Ddx55Q6ZPL9 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC6.71□□□□□ -1.34
Ddx55Q6ZPL9 Gm38214-201ENSMUST00000192581 988 ntBASIC6.71□□□□□ -1.34
Ddx55Q6ZPL9 Gm37993-201ENSMUST00000195301 988 ntBASIC6.71□□□□□ -1.34
Ddx55Q6ZPL9 Gm44456-201ENSMUST00000196554 89 ntBASIC6.71□□□□□ -1.34
Ddx55Q6ZPL9 Gm6543-201ENSMUST00000197353 808 ntBASIC6.71□□□□□ -1.34
Ddx55Q6ZPL9 Gm5554-201ENSMUST00000199726 1206 ntBASIC6.71□□□□□ -1.34
Ddx55Q6ZPL9 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC6.71□□□□□ -1.34
Ddx55Q6ZPL9 Gm44053-201ENSMUST00000203364 929 ntBASIC6.71□□□□□ -1.34
Ddx55Q6ZPL9 Olfr854-202ENSMUST00000212872 939 ntAPPRIS ALT2 BASIC6.71□□□□□ -1.34
Ddx55Q6ZPL9 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC6.71□□□□□ -1.34
Ddx55Q6ZPL9 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC6.71□□□□□ -1.34
Ddx55Q6ZPL9 AC134864.1-201ENSMUST00000226326 511 ntBASIC6.71□□□□□ -1.34
Ddx55Q6ZPL9 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC6.71□□□□□ -1.34
Ddx55Q6ZPL9 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Ddx55Q6ZPL9 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ddx55Q6ZPL9 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ddx55Q6ZPL9 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ddx55Q6ZPL9 Olfr1134-201ENSMUST00000099857 1102 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
Ddx55Q6ZPL9 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC6.71□□□□□ -1.34
Ddx55Q6ZPL9 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC6.71□□□□□ -1.34
Ddx55Q6ZPL9 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Ddx55Q6ZPL9 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.34
Ddx55Q6ZPL9 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ddx55Q6ZPL9 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ddx55Q6ZPL9 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ddx55Q6ZPL9 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC6.71□□□□□ -1.34
Ddx55Q6ZPL9 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ddx55Q6ZPL9 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Ddx55Q6ZPL9 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ddx55Q6ZPL9 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ddx55Q6ZPL9 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Ddx55Q6ZPL9 Olfr119-201ENSMUST00000080483 1541 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ddx55Q6ZPL9 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Ddx55Q6ZPL9 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ddx55Q6ZPL9 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Ddx55Q6ZPL9 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Ddx55Q6ZPL9 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Ddx55Q6ZPL9 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Ddx55Q6ZPL9 AC129085.2-201ENSMUST00000223763 2800 ntBASIC6.7□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 111.1 ms