Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Trim41Q5NCC3 Gm42881-201ENSMUST00000198636 3344 ntBASIC12.02□□□□□ -0.49
Trim41Q5NCC3 AC159308.1-201ENSMUST00000216615 1351 ntBASIC12.02□□□□□ -0.49
Trim41Q5NCC3 Akt3-203ENSMUST00000111160 4735 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim41Q5NCC3 CT010470.1-201ENSMUST00000225364 1876 ntBASIC12.02□□□□□ -0.49
Trim41Q5NCC3 EPPK1-201ENSMUST00000226781 12325 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Trim41Q5NCC3 Gm5182-201ENSMUST00000217708 6092 ntBASIC12.02□□□□□ -0.49
Trim41Q5NCC3 Gm38243-201ENSMUST00000194737 1567 ntBASIC12.01□□□□□ -0.49
Trim41Q5NCC3 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim41Q5NCC3 Adgrf1-201ENSMUST00000047399 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim41Q5NCC3 Myh10-202ENSMUST00000092984 7759 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim41Q5NCC3 Meis2-206ENSMUST00000110908 3697 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim41Q5NCC3 Olfr12-202ENSMUST00000213247 4158 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trim41Q5NCC3 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim41Q5NCC3 Gm23653-201ENSMUST00000116751 97 ntBASIC12.01□□□□□ -0.49
Trim41Q5NCC3 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC12.01□□□□□ -0.49
Trim41Q5NCC3 Gm14986-201ENSMUST00000121262 1002 ntBASIC12.01□□□□□ -0.49
Trim41Q5NCC3 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC12.01□□□□□ -0.49
Trim41Q5NCC3 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC12.01□□□□□ -0.49
Trim41Q5NCC3 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC12.01□□□□□ -0.49
Trim41Q5NCC3 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC12.01□□□□□ -0.49
Trim41Q5NCC3 Gm25428-201ENSMUST00000157608 114 ntBASIC12.01□□□□□ -0.49
Trim41Q5NCC3 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim41Q5NCC3 Gm7094-201ENSMUST00000178379 366 ntBASIC12.01□□□□□ -0.49
Trim41Q5NCC3 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC12.01□□□□□ -0.49
Trim41Q5NCC3 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Trim41Q5NCC3 Gm9167-201ENSMUST00000182469 962 ntBASIC12.01□□□□□ -0.49
Trim41Q5NCC3 Rpl28-ps2-201ENSMUST00000194739 554 ntBASIC12.01□□□□□ -0.49
Trim41Q5NCC3 Gm18867-201ENSMUST00000198022 1179 ntBASIC12.01□□□□□ -0.49
Trim41Q5NCC3 Gm43228-201ENSMUST00000200735 264 ntBASIC12.01□□□□□ -0.49
Trim41Q5NCC3 Gm43459-201ENSMUST00000202093 331 ntBASIC12.01□□□□□ -0.49
Trim41Q5NCC3 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC12.01□□□□□ -0.49
Trim41Q5NCC3 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC12.01□□□□□ -0.49
Trim41Q5NCC3 Mylf-ps-201ENSMUST00000222174 421 ntBASIC12.01□□□□□ -0.49
Trim41Q5NCC3 Zfp429-203ENSMUST00000224684 524 ntBASIC12.01□□□□□ -0.49
Trim41Q5NCC3 Gm24621-201ENSMUST00000082679 140 ntBASIC12.01□□□□□ -0.49
Trim41Q5NCC3 Gm23846-201ENSMUST00000083835 107 ntBASIC12.01□□□□□ -0.49
Trim41Q5NCC3 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim41Q5NCC3 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC12.01□□□□□ -0.49
Trim41Q5NCC3 Prkg1-201ENSMUST00000065067 3914 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim41Q5NCC3 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC12.01□□□□□ -0.49
Trim41Q5NCC3 A330058E17Rik-201ENSMUST00000200757 3890 ntBASIC12.01□□□□□ -0.49
Trim41Q5NCC3 Wdr76-201ENSMUST00000028676 2789 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim41Q5NCC3 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim41Q5NCC3 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trim41Q5NCC3 Phactr4-202ENSMUST00000084249 2349 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trim41Q5NCC3 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim41Q5NCC3 Cldn2-201ENSMUST00000054889 3044 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim41Q5NCC3 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trim41Q5NCC3 AC154597.1-201ENSMUST00000224095 2713 ntBASIC12□□□□□ -0.49
Trim41Q5NCC3 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim41Q5NCC3 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Trim41Q5NCC3 Gm11869-201ENSMUST00000118701 329 ntBASIC12□□□□□ -0.49
Trim41Q5NCC3 Gm15311-201ENSMUST00000119682 282 ntBASIC12□□□□□ -0.49
Trim41Q5NCC3 Gm15305-201ENSMUST00000120354 288 ntBASIC12□□□□□ -0.49
Trim41Q5NCC3 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC12□□□□□ -0.49
Trim41Q5NCC3 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC12□□□□□ -0.49
Trim41Q5NCC3 Gm22210-201ENSMUST00000158101 144 ntBASIC12□□□□□ -0.49
Trim41Q5NCC3 Gm25363-201ENSMUST00000158850 245 ntBASIC12□□□□□ -0.49
Trim41Q5NCC3 Gm6395-201ENSMUST00000167639 691 ntBASIC12□□□□□ -0.49
Trim41Q5NCC3 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC12□□□□□ -0.49
Trim41Q5NCC3 Dlx6os1-204ENSMUST00000184182 146 ntBASIC12□□□□□ -0.49
Trim41Q5NCC3 Gm27964-201ENSMUST00000185195 62 ntBASIC12□□□□□ -0.49
Trim41Q5NCC3 Gm28615-201ENSMUST00000187527 482 ntBASIC12□□□□□ -0.49
Trim41Q5NCC3 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC12□□□□□ -0.49
Trim41Q5NCC3 Gm37265-201ENSMUST00000191698 885 ntBASIC12□□□□□ -0.49
Trim41Q5NCC3 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC12□□□□□ -0.49
Trim41Q5NCC3 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC12□□□□□ -0.49
Trim41Q5NCC3 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC12□□□□□ -0.49
Trim41Q5NCC3 Olfr603-202ENSMUST00000218246 1021 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trim41Q5NCC3 AC164426.1-201ENSMUST00000225745 929 ntBASIC12□□□□□ -0.49
Trim41Q5NCC3 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trim41Q5NCC3 Gm5426-201ENSMUST00000074615 312 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trim41Q5NCC3 Gm26063-201ENSMUST00000083378 107 ntBASIC12□□□□□ -0.49
Trim41Q5NCC3 n-R5s168-201ENSMUST00000083948 104 ntBASIC12□□□□□ -0.49
Trim41Q5NCC3 Pi4ka-201ENSMUST00000036161 6431 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trim41Q5NCC3 Nfat5-214ENSMUST00000169453 13380 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Trim41Q5NCC3 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trim41Q5NCC3 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trim41Q5NCC3 Arhgef9-209ENSMUST00000181987 6222 ntTSL 2 BASIC12□□□□□ -0.49
Trim41Q5NCC3 Gm21671-201ENSMUST00000162387 2421 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trim41Q5NCC3 Tmem245-201ENSMUST00000068792 15981 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trim41Q5NCC3 Trim30b-204ENSMUST00000164410 3042 ntAPPRIS P5 TSL 1 (best) BASIC12□□□□□ -0.49
Trim41Q5NCC3 Gm32305-201ENSMUST00000221742 1899 ntTSL 5 BASIC12□□□□□ -0.49
Trim41Q5NCC3 9630028H03Rik-201ENSMUST00000129868 2364 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim41Q5NCC3 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim41Q5NCC3 Gm15000-201ENSMUST00000118275 1243 ntBASIC11.99□□□□□ -0.49
Trim41Q5NCC3 Gm12016-201ENSMUST00000119079 681 ntBASIC11.99□□□□□ -0.49
Trim41Q5NCC3 Gm4992-201ENSMUST00000120256 768 ntBASIC11.99□□□□□ -0.49
Trim41Q5NCC3 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim41Q5NCC3 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC11.99□□□□□ -0.49
Trim41Q5NCC3 Gm22261-201ENSMUST00000158691 324 ntBASIC11.99□□□□□ -0.49
Trim41Q5NCC3 Gm37430-201ENSMUST00000193039 196 ntBASIC11.99□□□□□ -0.49
Trim41Q5NCC3 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC11.99□□□□□ -0.49
Trim41Q5NCC3 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC11.99□□□□□ -0.49
Trim41Q5NCC3 Gm43725-201ENSMUST00000200122 369 ntBASIC11.99□□□□□ -0.49
Trim41Q5NCC3 Gm43897-201ENSMUST00000204019 309 ntBASIC11.99□□□□□ -0.49
Trim41Q5NCC3 Gm45192-201ENSMUST00000206749 283 ntBASIC11.99□□□□□ -0.49
Trim41Q5NCC3 Gm45689-201ENSMUST00000210522 133 ntBASIC11.99□□□□□ -0.49
Trim41Q5NCC3 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms