Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Usp39Q3TIX9 Gm18493-201ENSMUST00000192084 1612 ntBASIC5.92□□□□□ -1.46
Usp39Q3TIX9 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Usp39Q3TIX9 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Usp39Q3TIX9 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Usp39Q3TIX9 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Usp39Q3TIX9 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
Usp39Q3TIX9 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Gm7108-201ENSMUST00000118038 3407 ntBASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Gm22370-201ENSMUST00000102422 83 ntBASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Gm14305-201ENSMUST00000108980 1167 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Usp39Q3TIX9 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Olfr1292-ps1-201ENSMUST00000118137 939 ntBASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Gm12442-201ENSMUST00000118372 338 ntBASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Gm13835-201ENSMUST00000118459 685 ntBASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Gm12565-201ENSMUST00000119004 649 ntBASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Gm7058-201ENSMUST00000119209 902 ntBASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Gm13818-201ENSMUST00000119441 511 ntBASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Gm11407-201ENSMUST00000120362 1058 ntBASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Gm24854-201ENSMUST00000158025 98 ntBASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Crxos-205ENSMUST00000171280 571 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Gm20620-201ENSMUST00000177528 168 ntBASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Gm24754-201ENSMUST00000177997 107 ntBASIC5.91□□□□□ -1.46
Usp39Q3TIX9 n-R5s209-201ENSMUST00000179494 119 ntBASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC5.91□□□□□ -1.46
Usp39Q3TIX9 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Gm3351-201ENSMUST00000193454 505 ntBASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Gm37838-201ENSMUST00000194464 312 ntBASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Gm19653-201ENSMUST00000204326 1039 ntBASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Gm18600-201ENSMUST00000207205 505 ntBASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Gm45246-201ENSMUST00000210820 367 ntBASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Gm18585-201ENSMUST00000215197 556 ntBASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Gm5055-201ENSMUST00000215697 581 ntBASIC5.91□□□□□ -1.46
Usp39Q3TIX9 AL772397.1-201ENSMUST00000216707 606 ntBASIC5.91□□□□□ -1.46
Usp39Q3TIX9 AC132384.13-201ENSMUST00000219556 1159 ntBASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC5.91□□□□□ -1.46
Usp39Q3TIX9 AC158523.2-201ENSMUST00000222708 548 ntBASIC5.91□□□□□ -1.46
Usp39Q3TIX9 AC162857.1-201ENSMUST00000226614 400 ntBASIC5.91□□□□□ -1.46
Usp39Q3TIX9 AC154563.1-201ENSMUST00000228317 442 ntBASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Olfr714-201ENSMUST00000054629 954 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Ang5-201ENSMUST00000066719 700 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Olfr1505-201ENSMUST00000081520 1103 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Olfr1308-201ENSMUST00000099605 963 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Olfr1135-201ENSMUST00000099853 933 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Usp39Q3TIX9 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Gm38085-201ENSMUST00000195785 3062 ntBASIC5.91□□□□□ -1.46
Usp39Q3TIX9 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Usp39Q3TIX9 BC055308-201ENSMUST00000193380 2538 ntBASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Gm43360-201ENSMUST00000197656 2887 ntBASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Usp39Q3TIX9 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Gm37127-201ENSMUST00000192924 3036 ntBASIC5.91□□□□□ -1.46
Usp39Q3TIX9 Gm44416-201ENSMUST00000204055 2066 ntBASIC5.9□□□□□ -1.46
Usp39Q3TIX9 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Usp39Q3TIX9 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Usp39Q3TIX9 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC5.9□□□□□ -1.46
Usp39Q3TIX9 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Usp39Q3TIX9 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC5.9□□□□□ -1.46
Usp39Q3TIX9 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Usp39Q3TIX9 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC5.9□□□□□ -1.46
Usp39Q3TIX9 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
Usp39Q3TIX9 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
Usp39Q3TIX9 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Usp39Q3TIX9 AC022775.1-201ENSMUST00000228163 2698 ntBASIC5.9□□□□□ -1.46
Usp39Q3TIX9 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms