Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PrkdcP97313 Gm11484-201ENSMUST00000119808 338 ntBASIC3.65□□□□□ -1.83
PrkdcP97313 Scarna10-201ENSMUST00000158992 325 ntBASIC3.65□□□□□ -1.83
PrkdcP97313 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PrkdcP97313 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
PrkdcP97313 Gm28769-201ENSMUST00000190176 615 ntBASIC3.65□□□□□ -1.83
PrkdcP97313 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PrkdcP97313 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC3.65□□□□□ -1.83
PrkdcP97313 Gm45236-201ENSMUST00000208632 229 ntBASIC3.65□□□□□ -1.83
PrkdcP97313 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PrkdcP97313 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
PrkdcP97313 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PrkdcP97313 Gm37936-201ENSMUST00000194647 1322 ntBASIC3.65□□□□□ -1.83
PrkdcP97313 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
PrkdcP97313 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
PrkdcP97313 Anln-201ENSMUST00000040912 4605 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PrkdcP97313 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC3.65□□□□□ -1.83
PrkdcP97313 Pbrm1-205ENSMUST00000112092 5009 ntTSL 5 BASIC3.65□□□□□ -1.83
PrkdcP97313 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PrkdcP97313 Rttn-201ENSMUST00000023828 7268 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
PrkdcP97313 Acsl4-202ENSMUST00000112903 4956 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PrkdcP97313 Acsl4-203ENSMUST00000112904 4959 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PrkdcP97313 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PrkdcP97313 AC154630.1-201ENSMUST00000215334 2440 ntBASIC3.65□□□□□ -1.83
PrkdcP97313 Olfr1166-201ENSMUST00000099833 1628 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
PrkdcP97313 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
PrkdcP97313 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
PrkdcP97313 Gm13452-201ENSMUST00000120896 1097 ntBASIC3.64□□□□□ -1.83
PrkdcP97313 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC3.64□□□□□ -1.83
PrkdcP97313 Mir7685-201ENSMUST00000183555 62 ntBASIC3.64□□□□□ -1.83
PrkdcP97313 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC3.64□□□□□ -1.83
PrkdcP97313 Gm37632-201ENSMUST00000191811 1142 ntBASIC3.64□□□□□ -1.83
PrkdcP97313 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC3.64□□□□□ -1.83
PrkdcP97313 Gm43237-201ENSMUST00000196835 1044 ntBASIC3.64□□□□□ -1.83
PrkdcP97313 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC3.64□□□□□ -1.83
PrkdcP97313 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PrkdcP97313 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
PrkdcP97313 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
PrkdcP97313 AC132384.6-201ENSMUST00000218976 1206 ntBASIC3.64□□□□□ -1.83
PrkdcP97313 AC154358.1-201ENSMUST00000224871 218 ntBASIC3.64□□□□□ -1.83
PrkdcP97313 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PrkdcP97313 Gm46123-201ENSMUST00000217447 6424 ntTSL 5 BASIC3.64□□□□□ -1.83
PrkdcP97313 Gbp2b-201ENSMUST00000029936 2823 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PrkdcP97313 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PrkdcP97313 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PrkdcP97313 Rab8b-201ENSMUST00000041139 4733 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PrkdcP97313 Igsf9b-204ENSMUST00000214357 16144 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
PrkdcP97313 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PrkdcP97313 Kdsr-201ENSMUST00000010049 5518 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PrkdcP97313 Alcam-207ENSMUST00000170035 1917 ntTSL 5 BASIC3.64□□□□□ -1.83
PrkdcP97313 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC3.64□□□□□ -1.83
PrkdcP97313 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
PrkdcP97313 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
PrkdcP97313 Tmem170b-201ENSMUST00000129449 7168 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
PrkdcP97313 Gm14107-201ENSMUST00000117774 330 ntBASIC3.64□□□□□ -1.83
PrkdcP97313 Gm5963-201ENSMUST00000143451 236 ntBASIC3.64□□□□□ -1.83
PrkdcP97313 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC3.64□□□□□ -1.83
PrkdcP97313 Gm27976-201ENSMUST00000183635 162 ntBASIC3.64□□□□□ -1.83
PrkdcP97313 Gm28859-201ENSMUST00000186650 616 ntBASIC3.64□□□□□ -1.83
PrkdcP97313 Gm28428-201ENSMUST00000188886 697 ntBASIC3.64□□□□□ -1.83
PrkdcP97313 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC3.64□□□□□ -1.83
PrkdcP97313 AC153516.1-201ENSMUST00000217955 779 ntBASIC3.64□□□□□ -1.83
PrkdcP97313 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC3.64□□□□□ -1.83
PrkdcP97313 Gm8734-201ENSMUST00000211669 1312 ntBASIC3.64□□□□□ -1.83
PrkdcP97313 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PrkdcP97313 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
PrkdcP97313 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
PrkdcP97313 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC3.64□□□□□ -1.83
PrkdcP97313 Gm3234-201ENSMUST00000222644 5061 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PrkdcP97313 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PrkdcP97313 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
PrkdcP97313 Olfr338-203ENSMUST00000217511 5724 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
PrkdcP97313 Gm14756-201ENSMUST00000116395 240 ntBASIC3.64□□□□□ -1.83
PrkdcP97313 Gm15400-201ENSMUST00000118944 601 ntBASIC3.64□□□□□ -1.83
PrkdcP97313 Gm5405-201ENSMUST00000120478 609 ntBASIC3.64□□□□□ -1.83
PrkdcP97313 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC3.64□□□□□ -1.83
PrkdcP97313 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PrkdcP97313 Gm37503-201ENSMUST00000192088 319 ntBASIC3.64□□□□□ -1.83
PrkdcP97313 Gm43604-201ENSMUST00000199799 705 ntBASIC3.64□□□□□ -1.83
PrkdcP97313 Gm44134-202ENSMUST00000204777 545 ntBASIC3.64□□□□□ -1.83
PrkdcP97313 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC3.64□□□□□ -1.83
PrkdcP97313 AC161609.1-201ENSMUST00000225878 474 ntBASIC3.64□□□□□ -1.83
PrkdcP97313 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
PrkdcP97313 Tiam1-201ENSMUST00000002588 7290 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PrkdcP97313 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PrkdcP97313 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
PrkdcP97313 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC3.64□□□□□ -1.83
PrkdcP97313 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PrkdcP97313 Gm44424-201ENSMUST00000203438 1826 ntBASIC3.64□□□□□ -1.83
PrkdcP97313 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PrkdcP97313 Clec1a-202ENSMUST00000203162 5128 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PrkdcP97313 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PrkdcP97313 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
PrkdcP97313 Eif2ak4-202ENSMUST00000102527 4906 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PrkdcP97313 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PrkdcP97313 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
PrkdcP97313 Gm37916-201ENSMUST00000192153 2435 ntBASIC3.64□□□□□ -1.83
PrkdcP97313 Ubr1-201ENSMUST00000028728 7768 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PrkdcP97313 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PrkdcP97313 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC3.63□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 101.8 ms