Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 AC153357.1-201ENSMUST00000219190 482 ntBASIC6.18□□□□□ -1.42
SgcbP82349 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC6.18□□□□□ -1.42
SgcbP82349 Gm7712-201ENSMUST00000222214 337 ntTSL 5 BASIC6.18□□□□□ -1.42
SgcbP82349 CT030135.1-201ENSMUST00000223760 570 ntBASIC6.18□□□□□ -1.42
SgcbP82349 AC124433.2-201ENSMUST00000223867 291 ntBASIC6.18□□□□□ -1.42
SgcbP82349 AC138765.3-201ENSMUST00000227981 423 ntBASIC6.18□□□□□ -1.42
SgcbP82349 AC115735.5-201ENSMUST00000228386 397 ntBASIC6.18□□□□□ -1.42
SgcbP82349 Olfr697-201ENSMUST00000050541 1047 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
SgcbP82349 Mir181a-1-201ENSMUST00000083631 87 ntBASIC6.18□□□□□ -1.42
SgcbP82349 Gm44194-201ENSMUST00000204222 3229 ntBASIC6.18□□□□□ -1.42
SgcbP82349 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
SgcbP82349 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SgcbP82349 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
SgcbP82349 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC6.18□□□□□ -1.42
SgcbP82349 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
SgcbP82349 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SgcbP82349 Prkaa1-201ENSMUST00000051186 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SgcbP82349 Filip1l-203ENSMUST00000159816 4452 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SgcbP82349 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
SgcbP82349 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC6.18□□□□□ -1.42
SgcbP82349 Gm43022-201ENSMUST00000197067 4268 ntBASIC6.18□□□□□ -1.42
SgcbP82349 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SgcbP82349 Gm38173-201ENSMUST00000193126 2314 ntBASIC6.17□□□□□ -1.42
SgcbP82349 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
SgcbP82349 Gm16204-201ENSMUST00000117864 1897 ntBASIC6.17□□□□□ -1.42
SgcbP82349 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
SgcbP82349 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SgcbP82349 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
SgcbP82349 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SgcbP82349 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
SgcbP82349 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
SgcbP82349 Gm43187-201ENSMUST00000200652 2397 ntBASIC6.17□□□□□ -1.42
SgcbP82349 Olfr860-201ENSMUST00000086482 1686 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
SgcbP82349 Olfr666-202ENSMUST00000214757 1949 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
SgcbP82349 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SgcbP82349 F13a1-202ENSMUST00000164727 3854 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SgcbP82349 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SgcbP82349 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SgcbP82349 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SgcbP82349 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
SgcbP82349 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
SgcbP82349 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
SgcbP82349 Parp8-203ENSMUST00000223949 2965 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
SgcbP82349 Olfr54-202ENSMUST00000215409 4782 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
SgcbP82349 Ggta1-202ENSMUST00000079424 3254 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
SgcbP82349 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SgcbP82349 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
SgcbP82349 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
SgcbP82349 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
SgcbP82349 Gm24519-201ENSMUST00000104507 132 ntBASIC6.17□□□□□ -1.42
SgcbP82349 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC6.17□□□□□ -1.42
SgcbP82349 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC6.17□□□□□ -1.42
SgcbP82349 Gm14883-201ENSMUST00000120179 157 ntBASIC6.17□□□□□ -1.42
SgcbP82349 Gm16224-201ENSMUST00000127711 412 ntTSL 3 BASIC6.17□□□□□ -1.42
SgcbP82349 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SgcbP82349 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SgcbP82349 Gm22076-201ENSMUST00000158601 84 ntBASIC6.17□□□□□ -1.42
SgcbP82349 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC6.17□□□□□ -1.42
SgcbP82349 Gm23162-201ENSMUST00000175081 121 ntBASIC6.17□□□□□ -1.42
SgcbP82349 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
SgcbP82349 Gm2056-201ENSMUST00000178852 435 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
SgcbP82349 Gm27599-201ENSMUST00000183758 174 ntBASIC6.17□□□□□ -1.42
SgcbP82349 Gm27185-201ENSMUST00000184296 247 ntBASIC6.17□□□□□ -1.42
SgcbP82349 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC6.17□□□□□ -1.42
SgcbP82349 Gm17981-201ENSMUST00000191109 739 ntBASIC6.17□□□□□ -1.42
SgcbP82349 Ighv1-30-201ENSMUST00000194082 349 ntBASIC6.17□□□□□ -1.42
SgcbP82349 Gm37349-201ENSMUST00000194205 624 ntBASIC6.17□□□□□ -1.42
SgcbP82349 Gm37119-201ENSMUST00000195691 389 ntBASIC6.17□□□□□ -1.42
SgcbP82349 Gm42805-201ENSMUST00000196158 276 ntBASIC6.17□□□□□ -1.42
SgcbP82349 Gm43370-201ENSMUST00000196437 284 ntBASIC6.17□□□□□ -1.42
SgcbP82349 Gm19089-201ENSMUST00000197207 613 ntBASIC6.17□□□□□ -1.42
SgcbP82349 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC6.17□□□□□ -1.42
SgcbP82349 Gm34333-201ENSMUST00000200363 669 ntTSL 3 BASIC6.17□□□□□ -1.42
SgcbP82349 Gm42883-201ENSMUST00000202594 222 ntBASIC6.17□□□□□ -1.42
SgcbP82349 Gm44940-201ENSMUST00000206225 1247 ntBASIC6.17□□□□□ -1.42
SgcbP82349 Gm9357-201ENSMUST00000207138 805 ntBASIC6.17□□□□□ -1.42
SgcbP82349 Gm4585-201ENSMUST00000207218 452 ntBASIC6.17□□□□□ -1.42
SgcbP82349 Gm2767-201ENSMUST00000209582 473 ntBASIC6.17□□□□□ -1.42
SgcbP82349 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC6.17□□□□□ -1.42
SgcbP82349 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC6.17□□□□□ -1.42
SgcbP82349 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC6.17□□□□□ -1.42
SgcbP82349 Tespa1-202ENSMUST00000217702 1102 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SgcbP82349 AC132384.9-201ENSMUST00000218085 277 ntBASIC6.17□□□□□ -1.42
SgcbP82349 Gm46231-201ENSMUST00000220152 314 ntBASIC6.17□□□□□ -1.42
SgcbP82349 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
SgcbP82349 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC6.17□□□□□ -1.42
SgcbP82349 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC6.17□□□□□ -1.42
SgcbP82349 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC6.17□□□□□ -1.42
SgcbP82349 AC174776.1-201ENSMUST00000221509 405 ntBASIC6.17□□□□□ -1.42
SgcbP82349 AC174776.2-201ENSMUST00000222561 405 ntBASIC6.17□□□□□ -1.42
SgcbP82349 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC6.17□□□□□ -1.42
SgcbP82349 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SgcbP82349 Gm26176-201ENSMUST00000083795 105 ntBASIC6.17□□□□□ -1.42
SgcbP82349 Synpr-202ENSMUST00000112656 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SgcbP82349 Trpm8-202ENSMUST00000113114 4112 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SgcbP82349 Snhg17-209ENSMUST00000186993 3144 ntBASIC6.17□□□□□ -1.42
SgcbP82349 AC154734.1-201ENSMUST00000219957 2141 ntBASIC6.17□□□□□ -1.42
SgcbP82349 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
SgcbP82349 Gm32305-201ENSMUST00000221742 1899 ntTSL 5 BASIC6.17□□□□□ -1.42
SgcbP82349 Gm37080-201ENSMUST00000194804 2404 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms