Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Cux1P53564 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Cux1P53564 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Cux1P53564 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Cux1P53564 Galnt1-208ENSMUST00000178605 3796 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Cux1P53564 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
Cux1P53564 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Cux1P53564 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Cux1P53564 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Cux1P53564 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Cux1P53564 Gm25271-201ENSMUST00000157273 290 ntBASIC8.39□□□□□ -1.07
Cux1P53564 Gm2367-201ENSMUST00000192374 472 ntBASIC8.39□□□□□ -1.07
Cux1P53564 AC154626.1-201ENSMUST00000226070 311 ntBASIC8.39□□□□□ -1.07
Cux1P53564 AC139350.2-201ENSMUST00000226508 2331 ntBASIC8.39□□□□□ -1.07
Cux1P53564 AC163646.1-201ENSMUST00000227704 397 ntBASIC8.39□□□□□ -1.07
Cux1P53564 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC8.39□□□□□ -1.07
Cux1P53564 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Cux1P53564 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Cux1P53564 Olfr654-201ENSMUST00000098173 1155 ntBASIC8.39□□□□□ -1.07
Cux1P53564 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Cux1P53564 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC8.38□□□□□ -1.07
Cux1P53564 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Cux1P53564 Olfr1160-202ENSMUST00000215457 6042 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Cux1P53564 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC8.38□□□□□ -1.07
Cux1P53564 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC8.38□□□□□ -1.07
Cux1P53564 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Cux1P53564 Olfr846-202ENSMUST00000214810 4342 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Cux1P53564 AC164567.3-201ENSMUST00000217743 2869 ntBASIC8.38□□□□□ -1.07
Cux1P53564 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Cux1P53564 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Cux1P53564 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Cux1P53564 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC8.38□□□□□ -1.07
Cux1P53564 Gm28385-201ENSMUST00000185671 292 ntBASIC8.38□□□□□ -1.07
Cux1P53564 Gm7721-201ENSMUST00000200446 546 ntBASIC8.38□□□□□ -1.07
Cux1P53564 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Cux1P53564 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Cux1P53564 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Cux1P53564 AC120153.1-201ENSMUST00000226502 1311 ntBASIC8.38□□□□□ -1.07
Cux1P53564 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cux1P53564 Erbin-203ENSMUST00000091269 6224 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cux1P53564 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC8.37□□□□□ -1.07
Cux1P53564 Plch1-210ENSMUST00000162269 6539 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cux1P53564 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Cux1P53564 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Cux1P53564 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Cux1P53564 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Cux1P53564 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cux1P53564 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC8.37□□□□□ -1.07
Cux1P53564 Gm42662-201ENSMUST00000202539 1431 ntBASIC8.37□□□□□ -1.07
Cux1P53564 Zfp950-207ENSMUST00000180544 2568 ntAPPRIS P1 TSL 3 BASIC8.37□□□□□ -1.07
Cux1P53564 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC8.37□□□□□ -1.07
Cux1P53564 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
Cux1P53564 Gm38118-201ENSMUST00000192052 2222 ntBASIC8.37□□□□□ -1.07
Cux1P53564 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Cux1P53564 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Cux1P53564 Gm11346-201ENSMUST00000118346 704 ntBASIC8.37□□□□□ -1.07
Cux1P53564 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC8.37□□□□□ -1.07
Cux1P53564 Gm24217-201ENSMUST00000158260 133 ntBASIC8.37□□□□□ -1.07
Cux1P53564 Mir7012-201ENSMUST00000183900 64 ntBASIC8.37□□□□□ -1.07
Cux1P53564 Gm29489-201ENSMUST00000188934 324 ntBASIC8.37□□□□□ -1.07
Cux1P53564 Gm8480-201ENSMUST00000190350 698 ntBASIC8.37□□□□□ -1.07
Cux1P53564 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Cux1P53564 Gm18205-201ENSMUST00000209215 841 ntBASIC8.37□□□□□ -1.07
Cux1P53564 CT025686.1-201ENSMUST00000227592 438 ntBASIC8.37□□□□□ -1.07
Cux1P53564 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Cux1P53564 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Cux1P53564 Gm37914-201ENSMUST00000195317 2679 ntBASIC8.37□□□□□ -1.07
Cux1P53564 Gm37101-201ENSMUST00000191656 3660 ntBASIC8.37□□□□□ -1.07
Cux1P53564 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Cux1P53564 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC8.37□□□□□ -1.07
Cux1P53564 Gm42630-201ENSMUST00000195908 3448 ntBASIC8.37□□□□□ -1.07
Cux1P53564 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Cux1P53564 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Cux1P53564 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC8.36□□□□□ -1.07
Cux1P53564 AC122024.1-201ENSMUST00000219276 4850 ntBASIC8.36□□□□□ -1.07
Cux1P53564 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Cux1P53564 Gm13213-201ENSMUST00000119668 474 ntBASIC8.36□□□□□ -1.07
Cux1P53564 Gm12007-201ENSMUST00000120978 597 ntBASIC8.36□□□□□ -1.07
Cux1P53564 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC8.36□□□□□ -1.07
Cux1P53564 Gm26310-201ENSMUST00000157766 117 ntBASIC8.36□□□□□ -1.07
Cux1P53564 Serpinb10-202ENSMUST00000182198 1265 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Cux1P53564 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC8.36□□□□□ -1.07
Cux1P53564 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC8.36□□□□□ -1.07
Cux1P53564 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC8.36□□□□□ -1.07
Cux1P53564 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC8.36□□□□□ -1.07
Cux1P53564 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC8.36□□□□□ -1.07
Cux1P53564 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC8.36□□□□□ -1.07
Cux1P53564 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC8.36□□□□□ -1.07
Cux1P53564 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC8.36□□□□□ -1.07
Cux1P53564 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC8.36□□□□□ -1.07
Cux1P53564 Gm28464-201ENSMUST00000187726 622 ntTSL 5 BASIC8.36□□□□□ -1.07
Cux1P53564 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC8.36□□□□□ -1.07
Cux1P53564 Gm28295-201ENSMUST00000188322 622 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Cux1P53564 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC8.36□□□□□ -1.07
Cux1P53564 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC8.36□□□□□ -1.07
Cux1P53564 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC8.36□□□□□ -1.07
Cux1P53564 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC8.36□□□□□ -1.07
Cux1P53564 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC8.36□□□□□ -1.07
Cux1P53564 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC8.36□□□□□ -1.07
Cux1P53564 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC8.36□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms