Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm29158-201ENSMUST00000186883 1494 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm28291-202ENSMUST00000186921 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm29393-201ENSMUST00000187002 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm29219-201ENSMUST00000187224 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm29547-201ENSMUST00000187258 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm28260-201ENSMUST00000187337 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm28225-201ENSMUST00000187730 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm29569-202ENSMUST00000187955 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm29625-201ENSMUST00000188079 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm28735-202ENSMUST00000188159 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm29297-202ENSMUST00000188186 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm29457-201ENSMUST00000188224 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm29190-201ENSMUST00000188255 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm28236-203ENSMUST00000188311 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm28197-203ENSMUST00000188434 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm29070-202ENSMUST00000188541 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm28545-201ENSMUST00000188667 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm29265-201ENSMUST00000188697 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm28947-203ENSMUST00000188701 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm29616-201ENSMUST00000188777 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm29162-202ENSMUST00000188893 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm28606-201ENSMUST00000188938 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm29338-201ENSMUST00000189318 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm29425-202ENSMUST00000189421 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm29271-203ENSMUST00000189943 1499 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm29381-201ENSMUST00000190168 1497 ntTSL 5 BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm28454-203ENSMUST00000190183 1495 ntTSL 5 BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm28842-202ENSMUST00000190289 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm28259-201ENSMUST00000190319 1497 ntTSL 5 BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm28318-203ENSMUST00000190347 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm28633-202ENSMUST00000190867 1485 ntTSL 5 BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm29182-202ENSMUST00000191008 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm28632-202ENSMUST00000191193 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm28245-203ENSMUST00000191551 1495 ntTSL 5 BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm38370-201ENSMUST00000192545 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm37462-201ENSMUST00000193386 1498 ntTSL 5 BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm32114-203ENSMUST00000195759 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm5715-201ENSMUST00000196854 1465 ntBASIC6.31□□□□□ -1.4
Shmt1P50431 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC6.31□□□□□ -1.4
Shmt1P50431 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Shmt1P50431 Olfr1050-ps1-201ENSMUST00000119802 947 ntBASIC6.31□□□□□ -1.4
Shmt1P50431 Gm12288-201ENSMUST00000121054 1282 ntBASIC6.31□□□□□ -1.4
Shmt1P50431 Gm12094-201ENSMUST00000121781 472 ntBASIC6.31□□□□□ -1.4
Shmt1P50431 Gm15878-201ENSMUST00000127561 306 ntBASIC6.31□□□□□ -1.4
Shmt1P50431 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC6.31□□□□□ -1.4
Shmt1P50431 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm23149-201ENSMUST00000158837 230 ntBASIC6.31□□□□□ -1.4
Shmt1P50431 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC6.31□□□□□ -1.4
Shmt1P50431 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Shmt1P50431 Mir7235-201ENSMUST00000183796 56 ntBASIC6.31□□□□□ -1.4
Shmt1P50431 Vis1-201ENSMUST00000183957 201 ntBASIC6.31□□□□□ -1.4
Shmt1P50431 Mir7037-201ENSMUST00000184414 65 ntBASIC6.31□□□□□ -1.4
Shmt1P50431 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm37203-201ENSMUST00000191618 385 ntBASIC6.31□□□□□ -1.4
Shmt1P50431 Gm6321-201ENSMUST00000194460 1090 ntBASIC6.31□□□□□ -1.4
Shmt1P50431 Gm37358-201ENSMUST00000195492 479 ntBASIC6.31□□□□□ -1.4
Shmt1P50431 Gm43390-201ENSMUST00000196614 421 ntBASIC6.31□□□□□ -1.4
Shmt1P50431 Gm43295-201ENSMUST00000201439 412 ntBASIC6.31□□□□□ -1.4
Shmt1P50431 Gm44282-201ENSMUST00000203199 190 ntBASIC6.31□□□□□ -1.4
Shmt1P50431 Gm5886-202ENSMUST00000203957 522 ntBASIC6.31□□□□□ -1.4
Shmt1P50431 Gm6064-201ENSMUST00000203999 454 ntBASIC6.31□□□□□ -1.4
Shmt1P50431 Glrx-202ENSMUST00000220523 493 ntTSL 3 BASIC6.31□□□□□ -1.4
Shmt1P50431 AC124826.1-201ENSMUST00000221651 325 ntBASIC6.31□□□□□ -1.4
Shmt1P50431 Gm3333-202ENSMUST00000221763 1044 ntBASIC6.31□□□□□ -1.4
Shmt1P50431 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC6.31□□□□□ -1.4
Shmt1P50431 AC091783.3-201ENSMUST00000223969 681 ntBASIC6.31□□□□□ -1.4
Shmt1P50431 AC157654.1-201ENSMUST00000224130 820 ntBASIC6.31□□□□□ -1.4
Shmt1P50431 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Shmt1P50431 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm26063-201ENSMUST00000083378 107 ntBASIC6.31□□□□□ -1.4
Shmt1P50431 Sult2a2-201ENSMUST00000086148 741 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Shmt1P50431 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Shmt1P50431 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Shmt1P50431 Olfr994-201ENSMUST00000099925 945 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Shmt1P50431 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Shmt1P50431 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Shmt1P50431 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Shmt1P50431 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Shmt1P50431 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm17101-201ENSMUST00000169520 1588 ntBASIC6.31□□□□□ -1.4
Shmt1P50431 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
Shmt1P50431 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Shmt1P50431 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Shmt1P50431 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Shmt1P50431 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC6.3□□□□□ -1.4
Shmt1P50431 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC6.3□□□□□ -1.4
Shmt1P50431 Gm15011-201ENSMUST00000117724 1480 ntBASIC6.3□□□□□ -1.4
Shmt1P50431 Gm28322-201ENSMUST00000185627 1475 ntBASIC6.3□□□□□ -1.4
Shmt1P50431 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Shmt1P50431 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Shmt1P50431 Olfr972-202ENSMUST00000215303 1641 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
Shmt1P50431 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Shmt1P50431 Gm11105-201ENSMUST00000112781 478 ntBASIC6.3□□□□□ -1.4
Shmt1P50431 Gm12287-201ENSMUST00000119770 707 ntBASIC6.3□□□□□ -1.4
Shmt1P50431 Gm11387-201ENSMUST00000120266 772 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms