Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm15385-201ENSMUST00000118725 667 ntBASIC7.62□□□□□ -1.19
Rfx1P48377 Gm14975-201ENSMUST00000118741 664 ntBASIC7.62□□□□□ -1.19
Rfx1P48377 Gm15149-201ENSMUST00000119370 360 ntBASIC7.62□□□□□ -1.19
Rfx1P48377 Gm22276-201ENSMUST00000122469 129 ntBASIC7.62□□□□□ -1.19
Rfx1P48377 AV064505-201ENSMUST00000124572 522 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Rfx1P48377 H2-Ea-ps-201ENSMUST00000134042 686 ntBASIC7.62□□□□□ -1.19
Rfx1P48377 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC7.62□□□□□ -1.19
Rfx1P48377 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC7.62□□□□□ -1.19
Rfx1P48377 Gm7346-201ENSMUST00000169661 476 ntBASIC7.62□□□□□ -1.19
Rfx1P48377 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC7.62□□□□□ -1.19
Rfx1P48377 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC7.62□□□□□ -1.19
Rfx1P48377 Gm26194-201ENSMUST00000175036 71 ntBASIC7.62□□□□□ -1.19
Rfx1P48377 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC7.62□□□□□ -1.19
Rfx1P48377 Rian-211ENSMUST00000182737 699 ntTSL 3 BASIC7.62□□□□□ -1.19
Rfx1P48377 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC7.62□□□□□ -1.19
Rfx1P48377 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Rfx1P48377 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Rfx1P48377 Gm38291-201ENSMUST00000193671 259 ntBASIC7.62□□□□□ -1.19
Rfx1P48377 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Rfx1P48377 Gm43850-201ENSMUST00000202021 578 ntBASIC7.62□□□□□ -1.19
Rfx1P48377 Spin2g-202ENSMUST00000203586 1016 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Rfx1P48377 Gm44036-201ENSMUST00000204551 336 ntTSL 3 BASIC7.62□□□□□ -1.19
Rfx1P48377 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Rfx1P48377 Gm45042-201ENSMUST00000207377 211 ntBASIC7.62□□□□□ -1.19
Rfx1P48377 Gm44911-201ENSMUST00000208436 1062 ntBASIC7.62□□□□□ -1.19
Rfx1P48377 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC7.62□□□□□ -1.19
Rfx1P48377 AL603630.1-201ENSMUST00000214781 147 ntBASIC7.62□□□□□ -1.19
Rfx1P48377 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC7.62□□□□□ -1.19
Rfx1P48377 Gm4808-201ENSMUST00000222283 1203 ntBASIC7.62□□□□□ -1.19
Rfx1P48377 AC124569.1-201ENSMUST00000225932 101 ntBASIC7.62□□□□□ -1.19
Rfx1P48377 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Rfx1P48377 Olfr68-201ENSMUST00000072513 948 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Rfx1P48377 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Rfx1P48377 Lats2-203ENSMUST00000077981 786 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Rfx1P48377 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Rfx1P48377 Gm24921-201ENSMUST00000083024 107 ntBASIC7.62□□□□□ -1.19
Rfx1P48377 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
Rfx1P48377 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Rfx1P48377 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Rfx1P48377 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Rfx1P48377 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Rfx1P48377 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC7.62□□□□□ -1.19
Rfx1P48377 Olfr285-202ENSMUST00000216901 5330 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Rfx1P48377 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC7.62□□□□□ -1.19
Rfx1P48377 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Rfx1P48377 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Rfx1P48377 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Rfx1P48377 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Rfx1P48377 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Rfx1P48377 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Rfx1P48377 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC7.61□□□□□ -1.19
Rfx1P48377 AC134917.1-201ENSMUST00000220517 1449 ntBASIC7.61□□□□□ -1.19
Rfx1P48377 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC7.61□□□□□ -1.19
Rfx1P48377 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Rfx1P48377 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC7.61□□□□□ -1.19
Rfx1P48377 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Rfx1P48377 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Rfx1P48377 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Rfx1P48377 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Rfx1P48377 Pdgfd-203ENSMUST00000214892 2862 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Rfx1P48377 Cypt3-202ENSMUST00000112573 669 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Rfx1P48377 Gm16400-201ENSMUST00000116523 1029 ntBASIC7.61□□□□□ -1.19
Rfx1P48377 Gm15054-201ENSMUST00000117393 281 ntBASIC7.61□□□□□ -1.19
Rfx1P48377 Gm14106-201ENSMUST00000119382 438 ntBASIC7.61□□□□□ -1.19
Rfx1P48377 Gm11359-201ENSMUST00000120039 567 ntBASIC7.61□□□□□ -1.19
Rfx1P48377 n-R5s48-201ENSMUST00000122482 110 ntBASIC7.61□□□□□ -1.19
Rfx1P48377 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC7.61□□□□□ -1.19
Rfx1P48377 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC7.61□□□□□ -1.19
Rfx1P48377 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC7.61□□□□□ -1.19
Rfx1P48377 Gm22000-201ENSMUST00000153087 730 ntTSL 5 BASIC7.61□□□□□ -1.19
Rfx1P48377 Gm22116-201ENSMUST00000158791 141 ntBASIC7.61□□□□□ -1.19
Rfx1P48377 Vmn1r170-201ENSMUST00000170166 915 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Rfx1P48377 Gm7651-201ENSMUST00000173398 901 ntBASIC7.61□□□□□ -1.19
Rfx1P48377 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC7.61□□□□□ -1.19
Rfx1P48377 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC7.61□□□□□ -1.19
Rfx1P48377 Gm8332-201ENSMUST00000179468 435 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Rfx1P48377 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Rfx1P48377 Gm2035-201ENSMUST00000180053 435 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Rfx1P48377 Gm28114-201ENSMUST00000187232 379 ntBASIC7.61□□□□□ -1.19
Rfx1P48377 Gm37219-201ENSMUST00000192036 926 ntBASIC7.61□□□□□ -1.19
Rfx1P48377 Gm36999-201ENSMUST00000192756 1046 ntBASIC7.61□□□□□ -1.19
Rfx1P48377 Gm37380-201ENSMUST00000193752 397 ntBASIC7.61□□□□□ -1.19
Rfx1P48377 Ighv1-17-201ENSMUST00000194435 350 ntBASIC7.61□□□□□ -1.19
Rfx1P48377 Gm43357-201ENSMUST00000197132 342 ntTSL 3 BASIC7.61□□□□□ -1.19
Rfx1P48377 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Rfx1P48377 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Rfx1P48377 Gm18838-201ENSMUST00000204855 886 ntBASIC7.61□□□□□ -1.19
Rfx1P48377 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC7.61□□□□□ -1.19
Rfx1P48377 Gm44724-203ENSMUST00000208430 998 ntTSL 5 BASIC7.61□□□□□ -1.19
Rfx1P48377 Gm45279-201ENSMUST00000210315 391 ntBASIC7.61□□□□□ -1.19
Rfx1P48377 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC7.61□□□□□ -1.19
Rfx1P48377 Gm21936-201ENSMUST00000221442 435 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Rfx1P48377 Gm36262-201ENSMUST00000223274 499 ntBASIC7.61□□□□□ -1.19
Rfx1P48377 AC105407.3-201ENSMUST00000224161 648 ntBASIC7.61□□□□□ -1.19
Rfx1P48377 AC133203.2-201ENSMUST00000226709 464 ntBASIC7.61□□□□□ -1.19
Rfx1P48377 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Rfx1P48377 Tipin-201ENSMUST00000034964 1211 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Rfx1P48377 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC7.61□□□□□ -1.19
Rfx1P48377 Gm24621-201ENSMUST00000082679 140 ntBASIC7.61□□□□□ -1.19
Rfx1P48377 Gm10197-201ENSMUST00000086887 201 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms