Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HttP42859 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HttP42859 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC5.58□□□□□ -1.52
HttP42859 Gm44668-201ENSMUST00000207911 3265 ntBASIC5.58□□□□□ -1.52
HttP42859 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HttP42859 Cyfip1-203ENSMUST00000163845 4178 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HttP42859 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HttP42859 Serpinc1-201ENSMUST00000064725 4970 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HttP42859 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
HttP42859 Pantr1-203ENSMUST00000176154 514 ntTSL 5 BASIC5.58□□□□□ -1.52
HttP42859 Mir5710-201ENSMUST00000176884 69 ntBASIC5.58□□□□□ -1.52
HttP42859 Serpinb10-202ENSMUST00000182198 1265 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HttP42859 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC5.58□□□□□ -1.52
HttP42859 Gm37712-201ENSMUST00000194295 647 ntTSL 3 BASIC5.58□□□□□ -1.52
HttP42859 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC5.58□□□□□ -1.52
HttP42859 Rnmt-201ENSMUST00000009679 5008 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HttP42859 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
HttP42859 Olfr119-202ENSMUST00000213732 1722 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
HttP42859 Gm37040-201ENSMUST00000191740 1824 ntBASIC5.58□□□□□ -1.52
HttP42859 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
HttP42859 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
HttP42859 Adamts6-201ENSMUST00000065766 4822 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
HttP42859 Ubr1-201ENSMUST00000028728 7768 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HttP42859 Psma2-201ENSMUST00000170836 2911 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HttP42859 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC5.57□□□□□ -1.52
HttP42859 Gm25169-201ENSMUST00000104190 129 ntBASIC5.57□□□□□ -1.52
HttP42859 Gm14688-201ENSMUST00000119169 303 ntBASIC5.57□□□□□ -1.52
HttP42859 Gm11245-201ENSMUST00000119419 1037 ntBASIC5.57□□□□□ -1.52
HttP42859 Gm22986-201ENSMUST00000122753 130 ntBASIC5.57□□□□□ -1.52
HttP42859 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC5.57□□□□□ -1.52
HttP42859 Gm27976-201ENSMUST00000183635 162 ntBASIC5.57□□□□□ -1.52
HttP42859 Gm28443-201ENSMUST00000189081 698 ntBASIC5.57□□□□□ -1.52
HttP42859 Gm37961-201ENSMUST00000192729 299 ntBASIC5.57□□□□□ -1.52
HttP42859 Gm18864-201ENSMUST00000194518 1051 ntBASIC5.57□□□□□ -1.52
HttP42859 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HttP42859 AC154527.3-201ENSMUST00000225519 989 ntBASIC5.57□□□□□ -1.52
HttP42859 Gm23099-201ENSMUST00000083454 139 ntBASIC5.57□□□□□ -1.52
HttP42859 Olfr878-201ENSMUST00000086061 1065 ntBASIC5.57□□□□□ -1.52
HttP42859 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC5.57□□□□□ -1.52
HttP42859 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HttP42859 Olfr675-204ENSMUST00000215899 3737 ntTSL 5 BASIC5.57□□□□□ -1.52
HttP42859 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HttP42859 AC121844.3-201ENSMUST00000219124 1785 ntBASIC5.57□□□□□ -1.52
HttP42859 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC5.57□□□□□ -1.52
HttP42859 Tanc1-208ENSMUST00000139863 7246 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
HttP42859 4931406P16Rik-201ENSMUST00000085592 5798 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HttP42859 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
HttP42859 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
HttP42859 Gm14725-201ENSMUST00000120324 828 ntBASIC5.57□□□□□ -1.52
HttP42859 Gm15791-201ENSMUST00000120365 319 ntBASIC5.57□□□□□ -1.52
HttP42859 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
HttP42859 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
HttP42859 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
HttP42859 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
HttP42859 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
HttP42859 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
HttP42859 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC5.57□□□□□ -1.52
HttP42859 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HttP42859 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
HttP42859 Gm17952-201ENSMUST00000193914 747 ntBASIC5.57□□□□□ -1.52
HttP42859 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC5.57□□□□□ -1.52
HttP42859 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HttP42859 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HttP42859 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HttP42859 Spata31d1d-201ENSMUST00000052978 3827 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
HttP42859 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HttP42859 Gm4011-201ENSMUST00000174657 2555 ntBASIC5.57□□□□□ -1.52
HttP42859 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
HttP42859 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HttP42859 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC5.57□□□□□ -1.52
HttP42859 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
HttP42859 Prdm16-204ENSMUST00000105636 8426 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
HttP42859 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
HttP42859 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
HttP42859 Gm44144-201ENSMUST00000203683 1960 ntBASIC5.57□□□□□ -1.52
HttP42859 Sv2c-201ENSMUST00000161263 9101 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
HttP42859 Gm11874-201ENSMUST00000117437 130 ntBASIC5.57□□□□□ -1.52
HttP42859 Llph-ps1-201ENSMUST00000121281 390 ntBASIC5.57□□□□□ -1.52
HttP42859 Gm15227-201ENSMUST00000121844 399 ntBASIC5.57□□□□□ -1.52
HttP42859 Llph-ps2-201ENSMUST00000122000 393 ntBASIC5.57□□□□□ -1.52
HttP42859 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HttP42859 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC5.57□□□□□ -1.52
HttP42859 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC5.57□□□□□ -1.52
HttP42859 Gm43405-201ENSMUST00000198642 337 ntBASIC5.57□□□□□ -1.52
HttP42859 AC129597.1-201ENSMUST00000223046 1234 ntBASIC5.57□□□□□ -1.52
HttP42859 Tas2r102-201ENSMUST00000069268 1044 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
HttP42859 Mir194-1-201ENSMUST00000083647 67 ntBASIC5.57□□□□□ -1.52
HttP42859 Map2-207ENSMUST00000114018 5303 ntAPPRIS P3 TSL 5 BASIC5.56□□□□□ -1.52
HttP42859 Gm43333-201ENSMUST00000198340 2262 ntBASIC5.56□□□□□ -1.52
HttP42859 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HttP42859 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HttP42859 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
HttP42859 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC5.56□□□□□ -1.52
HttP42859 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HttP42859 Eif4g2-213ENSMUST00000162415 7995 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HttP42859 Ctnnd1-213ENSMUST00000111687 6030 ntTSL 5 BASIC5.56□□□□□ -1.52
HttP42859 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HttP42859 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HttP42859 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HttP42859 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms