Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
P20040 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC4.94□□□□□ -1.62
P20040 Pifo-201ENSMUST00000010280 956 ntAPPRIS P4 TSL 1 (best) BASIC4.94□□□□□ -1.62
P20040 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
P20040 Gm5073-201ENSMUST00000118222 820 ntBASIC4.94□□□□□ -1.62
P20040 Gm25782-201ENSMUST00000122526 289 ntBASIC4.94□□□□□ -1.62
P20040 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
P20040 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
P20040 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC4.94□□□□□ -1.62
P20040 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
P20040 Gm22326-201ENSMUST00000158897 351 ntBASIC4.94□□□□□ -1.62
P20040 Gm25445-201ENSMUST00000158996 299 ntBASIC4.94□□□□□ -1.62
P20040 Gm9006-201ENSMUST00000165520 841 ntBASIC4.94□□□□□ -1.62
P20040 Gm9027-201ENSMUST00000165914 661 ntBASIC4.94□□□□□ -1.62
P20040 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
P20040 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
P20040 Gm18199-201ENSMUST00000173820 835 ntBASIC4.94□□□□□ -1.62
P20040 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
P20040 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC4.94□□□□□ -1.62
P20040 Gm29664-201ENSMUST00000191125 463 ntBASIC4.94□□□□□ -1.62
P20040 Gm37700-201ENSMUST00000192617 965 ntBASIC4.94□□□□□ -1.62
P20040 Gm38360-201ENSMUST00000195130 454 ntBASIC4.94□□□□□ -1.62
P20040 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC4.94□□□□□ -1.62
P20040 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
P20040 n-TStga1-201ENSMUST00000199903 109 ntBASIC4.94□□□□□ -1.62
P20040 Gm4742-201ENSMUST00000200261 771 ntBASIC4.94□□□□□ -1.62
P20040 Gm4602-201ENSMUST00000203198 308 ntBASIC4.94□□□□□ -1.62
P20040 Gm44432-201ENSMUST00000203342 938 ntBASIC4.94□□□□□ -1.62
P20040 A530053G22Rik-203ENSMUST00000204370 612 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
P20040 Gm31861-201ENSMUST00000204563 672 ntBASIC4.94□□□□□ -1.62
P20040 Gm8523-201ENSMUST00000211386 552 ntBASIC4.94□□□□□ -1.62
P20040 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
P20040 Gm19073-201ENSMUST00000219978 555 ntBASIC4.94□□□□□ -1.62
P20040 AC155922.1-201ENSMUST00000220100 373 ntBASIC4.94□□□□□ -1.62
P20040 AC154595.2-201ENSMUST00000225067 310 ntBASIC4.94□□□□□ -1.62
P20040 AC146601.1-201ENSMUST00000227910 905 ntBASIC4.94□□□□□ -1.62
P20040 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
P20040 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
P20040 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
P20040 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
P20040 Olfr934-201ENSMUST00000074211 933 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
P20040 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC4.94□□□□□ -1.62
P20040 n-R5s161-201ENSMUST00000083728 114 ntBASIC4.94□□□□□ -1.62
P20040 Gm7980-201ENSMUST00000168107 1403 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
P20040 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC4.94□□□□□ -1.62
P20040 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
P20040 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
P20040 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
P20040 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
P20040 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
P20040 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
P20040 Gm4954-201ENSMUST00000135069 1601 ntBASIC4.94□□□□□ -1.62
P20040 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
P20040 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
P20040 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
P20040 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
P20040 Gm43180-201ENSMUST00000197541 2886 ntBASIC4.93□□□□□ -1.62
P20040 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
P20040 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
P20040 Syt4-201ENSMUST00000025110 3901 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
P20040 Olfr3-201ENSMUST00000100151 942 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
P20040 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
P20040 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
P20040 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
P20040 Gm15660-201ENSMUST00000118997 478 ntBASIC4.93□□□□□ -1.62
P20040 Gm14925-201ENSMUST00000120611 438 ntBASIC4.93□□□□□ -1.62
P20040 Gm12731-201ENSMUST00000120932 268 ntBASIC4.93□□□□□ -1.62
P20040 Gm15152-201ENSMUST00000121540 394 ntBASIC4.93□□□□□ -1.62
P20040 Gm12110-201ENSMUST00000121601 579 ntBASIC4.93□□□□□ -1.62
P20040 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC4.93□□□□□ -1.62
P20040 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
P20040 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC4.93□□□□□ -1.62
P20040 Gm23030-201ENSMUST00000158004 273 ntBASIC4.93□□□□□ -1.62
P20040 Gm23115-201ENSMUST00000158480 108 ntBASIC4.93□□□□□ -1.62
P20040 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
P20040 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
P20040 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
P20040 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
P20040 Gm36939-201ENSMUST00000194889 439 ntBASIC4.93□□□□□ -1.62
P20040 Gm44777-202ENSMUST00000206492 1889 ntTSL 5 BASIC4.93□□□□□ -1.62
P20040 Gm19900-201ENSMUST00000207285 576 ntBASIC4.93□□□□□ -1.62
P20040 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
P20040 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC4.93□□□□□ -1.62
P20040 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC4.93□□□□□ -1.62
P20040 Gm33242-201ENSMUST00000212130 1057 ntBASIC4.93□□□□□ -1.62
P20040 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC4.93□□□□□ -1.62
P20040 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
P20040 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC4.93□□□□□ -1.62
P20040 Gm7042-201ENSMUST00000223027 384 ntBASIC4.93□□□□□ -1.62
P20040 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC4.93□□□□□ -1.62
P20040 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
P20040 Tmem69-201ENSMUST00000069674 974 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
P20040 Olfr192-201ENSMUST00000080251 925 ntBASIC4.93□□□□□ -1.62
P20040 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
P20040 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
P20040 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
P20040 Gm37101-201ENSMUST00000191656 3660 ntBASIC4.93□□□□□ -1.62
P20040 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
P20040 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC4.93□□□□□ -1.62
P20040 Gm37018-201ENSMUST00000192441 3869 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 104.2 ms