Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm23279-201ENSMUST00000157912 97 ntBASIC5.32□□□□□ -1.56
Trim3Q9R1R2 Gm25445-201ENSMUST00000158996 299 ntBASIC5.32□□□□□ -1.56
Trim3Q9R1R2 Gm9027-201ENSMUST00000165914 661 ntBASIC5.32□□□□□ -1.56
Trim3Q9R1R2 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC5.32□□□□□ -1.56
Trim3Q9R1R2 Gm16531-201ENSMUST00000180658 967 ntBASIC5.32□□□□□ -1.56
Trim3Q9R1R2 Gm27024-201ENSMUST00000182561 755 ntBASIC5.32□□□□□ -1.56
Trim3Q9R1R2 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC5.32□□□□□ -1.56
Trim3Q9R1R2 Gm28835-202ENSMUST00000189206 543 ntTSL 3 BASIC5.32□□□□□ -1.56
Trim3Q9R1R2 Gm8930-201ENSMUST00000201693 768 ntBASIC5.32□□□□□ -1.56
Trim3Q9R1R2 Gm33242-201ENSMUST00000212130 1057 ntBASIC5.32□□□□□ -1.56
Trim3Q9R1R2 Gm45722-201ENSMUST00000213075 466 ntBASIC5.32□□□□□ -1.56
Trim3Q9R1R2 Olfr1245-201ENSMUST00000214870 1062 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Trim3Q9R1R2 Tas2r108-201ENSMUST00000038750 1013 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Trim3Q9R1R2 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Trim3Q9R1R2 Gm10145-201ENSMUST00000077776 462 ntBASIC5.32□□□□□ -1.56
Trim3Q9R1R2 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC5.32□□□□□ -1.56
Trim3Q9R1R2 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC5.32□□□□□ -1.56
Trim3Q9R1R2 Olfr356-201ENSMUST00000095021 948 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Trim3Q9R1R2 Olfr441-201ENSMUST00000095954 933 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Trim3Q9R1R2 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Trim3Q9R1R2 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Trim3Q9R1R2 AC151971.5-201ENSMUST00000214422 3254 ntBASIC5.32□□□□□ -1.56
Trim3Q9R1R2 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Trim3Q9R1R2 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC5.32□□□□□ -1.56
Trim3Q9R1R2 AC121942.1-201ENSMUST00000224459 2891 ntBASIC5.32□□□□□ -1.56
Trim3Q9R1R2 Gm37628-201ENSMUST00000194644 5440 ntBASIC5.32□□□□□ -1.56
Trim3Q9R1R2 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Trim3Q9R1R2 Gm44242-201ENSMUST00000204212 2721 ntBASIC5.32□□□□□ -1.56
Trim3Q9R1R2 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Trim3Q9R1R2 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Trim3Q9R1R2 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Trim3Q9R1R2 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Trim3Q9R1R2 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Trim3Q9R1R2 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Trim3Q9R1R2 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC5.31□□□□□ -1.56
Trim3Q9R1R2 Gm22499-201ENSMUST00000104501 135 ntBASIC5.31□□□□□ -1.56
Trim3Q9R1R2 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Trim3Q9R1R2 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Trim3Q9R1R2 Mir466f-4-201ENSMUST00000116930 121 ntBASIC5.31□□□□□ -1.56
Trim3Q9R1R2 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Trim3Q9R1R2 Gm15335-201ENSMUST00000122442 411 ntBASIC5.31□□□□□ -1.56
Trim3Q9R1R2 Tbata-207ENSMUST00000140456 953 ntTSL 5 BASIC5.31□□□□□ -1.56
Trim3Q9R1R2 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Trim3Q9R1R2 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Trim3Q9R1R2 Gm22492-201ENSMUST00000157192 297 ntBASIC5.31□□□□□ -1.56
Trim3Q9R1R2 Gm23030-201ENSMUST00000158004 273 ntBASIC5.31□□□□□ -1.56
Trim3Q9R1R2 Gm25439-201ENSMUST00000158280 131 ntBASIC5.31□□□□□ -1.56
Trim3Q9R1R2 Gm22160-201ENSMUST00000158405 328 ntBASIC5.31□□□□□ -1.56
Trim3Q9R1R2 Gm25048-201ENSMUST00000158598 91 ntBASIC5.31□□□□□ -1.56
Trim3Q9R1R2 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC5.31□□□□□ -1.56
Trim3Q9R1R2 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC5.31□□□□□ -1.56
Trim3Q9R1R2 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC5.31□□□□□ -1.56
Trim3Q9R1R2 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC5.31□□□□□ -1.56
Trim3Q9R1R2 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Trim3Q9R1R2 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
Trim3Q9R1R2 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC5.31□□□□□ -1.56
Trim3Q9R1R2 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC5.31□□□□□ -1.56
Trim3Q9R1R2 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
Trim3Q9R1R2 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Trim3Q9R1R2 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Trim3Q9R1R2 Gm18558-201ENSMUST00000186253 1214 ntBASIC5.31□□□□□ -1.56
Trim3Q9R1R2 Frmd8os-202ENSMUST00000187697 516 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Trim3Q9R1R2 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC5.31□□□□□ -1.56
Trim3Q9R1R2 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC5.31□□□□□ -1.56
Trim3Q9R1R2 Gm42619-201ENSMUST00000197564 1136 ntBASIC5.31□□□□□ -1.56
Trim3Q9R1R2 Gm4742-201ENSMUST00000200261 771 ntBASIC5.31□□□□□ -1.56
Trim3Q9R1R2 Gm29781-201ENSMUST00000203862 478 ntBASIC5.31□□□□□ -1.56
Trim3Q9R1R2 Gm7890-201ENSMUST00000204877 601 ntBASIC5.31□□□□□ -1.56
Trim3Q9R1R2 Gm45082-201ENSMUST00000206082 601 ntBASIC5.31□□□□□ -1.56
Trim3Q9R1R2 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC5.31□□□□□ -1.56
Trim3Q9R1R2 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC5.31□□□□□ -1.56
Trim3Q9R1R2 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC5.31□□□□□ -1.56
Trim3Q9R1R2 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Trim3Q9R1R2 Gm6068-201ENSMUST00000222270 387 ntBASIC5.31□□□□□ -1.56
Trim3Q9R1R2 AV026068-237ENSMUST00000226075 572 ntBASIC5.31□□□□□ -1.56
Trim3Q9R1R2 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Trim3Q9R1R2 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC5.31□□□□□ -1.56
Trim3Q9R1R2 Mir143-201ENSMUST00000083511 63 ntBASIC5.31□□□□□ -1.56
Trim3Q9R1R2 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Trim3Q9R1R2 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC5.31□□□□□ -1.56
Trim3Q9R1R2 Gm19113-201ENSMUST00000217552 1828 ntBASIC5.31□□□□□ -1.56
Trim3Q9R1R2 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC5.31□□□□□ -1.56
Trim3Q9R1R2 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Trim3Q9R1R2 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Trim3Q9R1R2 Gm45183-201ENSMUST00000207937 1497 ntBASIC5.31□□□□□ -1.56
Trim3Q9R1R2 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Trim3Q9R1R2 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Trim3Q9R1R2 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Trim3Q9R1R2 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Trim3Q9R1R2 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Trim3Q9R1R2 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
Trim3Q9R1R2 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
Trim3Q9R1R2 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Trim3Q9R1R2 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
Trim3Q9R1R2 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Trim3Q9R1R2 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Trim3Q9R1R2 Gm44777-202ENSMUST00000206492 1889 ntTSL 5 BASIC5.3□□□□□ -1.56
Trim3Q9R1R2 Gm42397-206ENSMUST00000208808 1358 ntTSL 5 BASIC5.3□□□□□ -1.56
Trim3Q9R1R2 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
Trim3Q9R1R2 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms