Protein–RNA interactions for Protein: Q9DCN7

Rnft1, E3 ubiquitin-protein ligase RNFT1, mousemouse

Predictions only

Length 395 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnft1Q9DCN7 Gm26289-201ENSMUST00000104169 131 ntBASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 Gm12225-201ENSMUST00000117995 298 ntBASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 Gm14294-201ENSMUST00000119749 751 ntBASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 Gm16458-201ENSMUST00000121428 502 ntBASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 Gm14847-201ENSMUST00000121978 519 ntBASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 C230035I16Rik-201ENSMUST00000141543 623 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 4930445N08Rik-201ENSMUST00000156925 313 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 Gm23082-201ENSMUST00000157852 133 ntBASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 Mir1945-201ENSMUST00000157919 78 ntBASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 Gm25374-201ENSMUST00000158158 101 ntBASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 Gm15508-201ENSMUST00000160330 325 ntBASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 Gm6489-201ENSMUST00000178167 696 ntBASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 Gm10136-201ENSMUST00000183196 435 ntBASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 Gm20561-201ENSMUST00000188131 292 ntBASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 Gm37265-201ENSMUST00000191698 885 ntBASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 Gm37358-201ENSMUST00000195492 479 ntBASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 Gm38395-201ENSMUST00000199904 830 ntBASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 A530053G22Rik-203ENSMUST00000204370 612 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 Gm31749-201ENSMUST00000206873 598 ntTSL 3 BASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 Gm18600-201ENSMUST00000207205 505 ntBASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 CT573422.1-201ENSMUST00000216655 405 ntBASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 CT030238.4-202ENSMUST00000226143 745 ntBASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 AC112972.1-201ENSMUST00000227329 365 ntBASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 AC144628.1-201ENSMUST00000227943 466 ntBASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 AC137902.2-201ENSMUST00000227989 576 ntBASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 Dbi-201ENSMUST00000027634 569 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 Olfr218-201ENSMUST00000057548 942 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 Olfr933-201ENSMUST00000075680 1003 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 Gm23054-201ENSMUST00000082804 162 ntBASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 Mir138-2-201ENSMUST00000083578 71 ntBASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 Gm22578-201ENSMUST00000083730 107 ntBASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 Gm10540-201ENSMUST00000097581 276 ntBASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 Gm43788-201ENSMUST00000201539 2417 ntBASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 Gm37248-201ENSMUST00000193576 3174 ntBASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Rnft1Q9DCN7 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
Rnft1Q9DCN7 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Rnft1Q9DCN7 Svs2-202ENSMUST00000109374 1479 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Rnft1Q9DCN7 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC5.9□□□□□ -1.46
Rnft1Q9DCN7 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Rnft1Q9DCN7 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC5.9□□□□□ -1.46
Rnft1Q9DCN7 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Rnft1Q9DCN7 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Rnft1Q9DCN7 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Rnft1Q9DCN7 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Rnft1Q9DCN7 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Rnft1Q9DCN7 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Rnft1Q9DCN7 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Rnft1Q9DCN7 Gm44242-201ENSMUST00000204212 2721 ntBASIC5.9□□□□□ -1.46
Rnft1Q9DCN7 Mir546-201ENSMUST00000102105 121 ntBASIC5.9□□□□□ -1.46
Rnft1Q9DCN7 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Rnft1Q9DCN7 Gm25093-201ENSMUST00000103993 132 ntBASIC5.9□□□□□ -1.46
Rnft1Q9DCN7 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Rnft1Q9DCN7 Gm13806-201ENSMUST00000117822 325 ntBASIC5.9□□□□□ -1.46
Rnft1Q9DCN7 Gm4914-201ENSMUST00000119757 459 ntBASIC5.9□□□□□ -1.46
Rnft1Q9DCN7 Gm13493-201ENSMUST00000120318 493 ntBASIC5.9□□□□□ -1.46
Rnft1Q9DCN7 Gm15696-201ENSMUST00000121730 445 ntBASIC5.9□□□□□ -1.46
Rnft1Q9DCN7 Gm12175-201ENSMUST00000122081 345 ntBASIC5.9□□□□□ -1.46
Rnft1Q9DCN7 Gm15840-201ENSMUST00000122099 943 ntBASIC5.9□□□□□ -1.46
Rnft1Q9DCN7 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Rnft1Q9DCN7 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC5.9□□□□□ -1.46
Rnft1Q9DCN7 4930517O19Rik-201ENSMUST00000140320 603 ntTSL 5 BASIC5.9□□□□□ -1.46
Rnft1Q9DCN7 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Rnft1Q9DCN7 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC5.9□□□□□ -1.46
Rnft1Q9DCN7 Gm24236-201ENSMUST00000157794 134 ntBASIC5.9□□□□□ -1.46
Rnft1Q9DCN7 Gm24773-201ENSMUST00000158513 99 ntBASIC5.9□□□□□ -1.46
Rnft1Q9DCN7 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Rnft1Q9DCN7 Gm16269-201ENSMUST00000160532 409 ntBASIC5.9□□□□□ -1.46
Rnft1Q9DCN7 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Rnft1Q9DCN7 Ear-ps10-201ENSMUST00000161871 460 ntBASIC5.9□□□□□ -1.46
Rnft1Q9DCN7 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Rnft1Q9DCN7 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC5.9□□□□□ -1.46
Rnft1Q9DCN7 Obox4-ps31-201ENSMUST00000177210 1137 ntBASIC5.9□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms