Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Chmp2aQ9DB34 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Chmp2aQ9DB34 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Chmp2aQ9DB34 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Chmp2aQ9DB34 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Chmp2aQ9DB34 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Chmp2aQ9DB34 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Chmp2aQ9DB34 Gm29376-201ENSMUST00000189357 835 ntBASIC5.74□□□□□ -1.49
Chmp2aQ9DB34 Gm17952-201ENSMUST00000193914 747 ntBASIC5.74□□□□□ -1.49
Chmp2aQ9DB34 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC5.74□□□□□ -1.49
Chmp2aQ9DB34 Gm43078-201ENSMUST00000197222 168 ntBASIC5.74□□□□□ -1.49
Chmp2aQ9DB34 Gm6520-201ENSMUST00000200636 410 ntBASIC5.74□□□□□ -1.49
Chmp2aQ9DB34 Gm45008-201ENSMUST00000206420 493 ntBASIC5.74□□□□□ -1.49
Chmp2aQ9DB34 Gm19168-201ENSMUST00000218804 1091 ntBASIC5.74□□□□□ -1.49
Chmp2aQ9DB34 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Chmp2aQ9DB34 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Chmp2aQ9DB34 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
Chmp2aQ9DB34 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Chmp2aQ9DB34 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Chmp2aQ9DB34 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Chmp2aQ9DB34 Gm28322-201ENSMUST00000185627 1475 ntBASIC5.74□□□□□ -1.49
Chmp2aQ9DB34 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Chmp2aQ9DB34 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Chmp2aQ9DB34 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
Chmp2aQ9DB34 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC5.74□□□□□ -1.49
Chmp2aQ9DB34 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
Chmp2aQ9DB34 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC5.74□□□□□ -1.49
Chmp2aQ9DB34 Gm37127-201ENSMUST00000192924 3036 ntBASIC5.74□□□□□ -1.49
Chmp2aQ9DB34 Gm37775-201ENSMUST00000194120 2313 ntBASIC5.74□□□□□ -1.49
Chmp2aQ9DB34 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Chmp2aQ9DB34 Gm8853-201ENSMUST00000198366 1344 ntBASIC5.74□□□□□ -1.49
Chmp2aQ9DB34 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 3110099E03Rik-202ENSMUST00000134580 2644 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 C87499-202ENSMUST00000107142 672 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 Gm11270-201ENSMUST00000117685 471 ntBASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 Gm14220-201ENSMUST00000118114 449 ntBASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 Gm14874-201ENSMUST00000118995 438 ntBASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 Gm14472-201ENSMUST00000119815 282 ntBASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 Gm12583-201ENSMUST00000120677 853 ntBASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 Gm11679-201ENSMUST00000121830 779 ntBASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 Gm25433-201ENSMUST00000158283 286 ntBASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 Gm16139-201ENSMUST00000160015 420 ntBASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 Gm22411-201ENSMUST00000175462 126 ntBASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 Gm22002-201ENSMUST00000175622 125 ntBASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 Gm24465-201ENSMUST00000178398 107 ntBASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 Mir7674-201ENSMUST00000184964 63 ntBASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 Gm29592-201ENSMUST00000189434 370 ntBASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 Gm37256-201ENSMUST00000193034 566 ntTSL 5 BASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 Gm38040-201ENSMUST00000193505 225 ntBASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 Gm18553-201ENSMUST00000194152 634 ntBASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 Gm42461-201ENSMUST00000198627 1150 ntBASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 Gm38670-201ENSMUST00000199248 77 ntBASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 Gm35037-201ENSMUST00000203144 506 ntTSL 3 BASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 AC171206.1-201ENSMUST00000213612 213 ntBASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 Gm18705-201ENSMUST00000215985 913 ntBASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 Gm46192-201ENSMUST00000217894 326 ntBASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 CT030195.1-201ENSMUST00000223887 378 ntBASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 AC107757.1-201ENSMUST00000226780 357 ntBASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 AC159896.3-201ENSMUST00000215904 3835 ntBASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 Gm42397-205ENSMUST00000208692 1449 ntTSL 5 BASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Chmp2aQ9DB34 Gm19131-202ENSMUST00000203464 3208 ntBASIC5.72□□□□□ -1.49
Chmp2aQ9DB34 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC5.72□□□□□ -1.49
Chmp2aQ9DB34 2900018N21Rik-201ENSMUST00000195805 1580 ntBASIC5.72□□□□□ -1.49
Chmp2aQ9DB34 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC5.72□□□□□ -1.49
Chmp2aQ9DB34 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC5.72□□□□□ -1.49
Chmp2aQ9DB34 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Chmp2aQ9DB34 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms