Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Ddx56Q9D0R4 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC6.43□□□□□ -1.38
Ddx56Q9D0R4 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Ddx56Q9D0R4 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC6.43□□□□□ -1.38
Ddx56Q9D0R4 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Ddx56Q9D0R4 AC154627.2-201ENSMUST00000227028 4669 ntBASIC6.43□□□□□ -1.38
Ddx56Q9D0R4 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Ddx56Q9D0R4 Gm37926-201ENSMUST00000191922 2424 ntBASIC6.43□□□□□ -1.38
Ddx56Q9D0R4 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Ddx56Q9D0R4 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Ddx56Q9D0R4 Gm14349-201ENSMUST00000137155 902 ntBASIC6.43□□□□□ -1.38
Ddx56Q9D0R4 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC6.43□□□□□ -1.38
Ddx56Q9D0R4 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC6.43□□□□□ -1.38
Ddx56Q9D0R4 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC6.43□□□□□ -1.38
Ddx56Q9D0R4 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Ddx56Q9D0R4 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Ddx56Q9D0R4 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC6.43□□□□□ -1.38
Ddx56Q9D0R4 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC6.43□□□□□ -1.38
Ddx56Q9D0R4 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Ddx56Q9D0R4 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC6.43□□□□□ -1.38
Ddx56Q9D0R4 Gm37784-201ENSMUST00000193233 189 ntBASIC6.43□□□□□ -1.38
Ddx56Q9D0R4 Gm43390-201ENSMUST00000196614 421 ntBASIC6.43□□□□□ -1.38
Ddx56Q9D0R4 Trav12-4-201ENSMUST00000200663 271 ntBASIC6.43□□□□□ -1.38
Ddx56Q9D0R4 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC6.43□□□□□ -1.38
Ddx56Q9D0R4 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC6.43□□□□□ -1.38
Ddx56Q9D0R4 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Ddx56Q9D0R4 Gm45823-201ENSMUST00000212714 515 ntTSL 5 BASIC6.43□□□□□ -1.38
Ddx56Q9D0R4 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC6.43□□□□□ -1.38
Ddx56Q9D0R4 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC6.43□□□□□ -1.38
Ddx56Q9D0R4 AC174082.2-201ENSMUST00000222094 543 ntBASIC6.43□□□□□ -1.38
Ddx56Q9D0R4 AC162934.3-201ENSMUST00000223015 841 ntBASIC6.43□□□□□ -1.38
Ddx56Q9D0R4 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Ddx56Q9D0R4 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC6.43□□□□□ -1.38
Ddx56Q9D0R4 Gm24319-201ENSMUST00000083389 107 ntBASIC6.43□□□□□ -1.38
Ddx56Q9D0R4 Olfr606-201ENSMUST00000098200 960 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Ddx56Q9D0R4 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Ddx56Q9D0R4 Olfr259-203ENSMUST00000215828 4095 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Ddx56Q9D0R4 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
Ddx56Q9D0R4 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Ddx56Q9D0R4 AC121997.2-201ENSMUST00000228095 2294 ntBASIC6.43□□□□□ -1.38
Ddx56Q9D0R4 AC166358.5-201ENSMUST00000220706 1302 ntBASIC6.43□□□□□ -1.38
Ddx56Q9D0R4 Gm20644-201ENSMUST00000176721 2063 ntBASIC6.43□□□□□ -1.38
Ddx56Q9D0R4 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Ddx56Q9D0R4 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Ddx56Q9D0R4 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC6.43□□□□□ -1.38
Ddx56Q9D0R4 Gm42513-201ENSMUST00000197831 2119 ntBASIC6.43□□□□□ -1.38
Ddx56Q9D0R4 Olfr619-202ENSMUST00000215732 1370 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Ddx56Q9D0R4 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Ddx56Q9D0R4 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Gm24935-201ENSMUST00000103770 110 ntBASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Gm15001-201ENSMUST00000117657 795 ntBASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Gm14985-201ENSMUST00000118693 786 ntBASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Gm15390-201ENSMUST00000120323 738 ntBASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Gm15696-201ENSMUST00000121730 445 ntBASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Gm13669-201ENSMUST00000122366 457 ntBASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Gm11697-201ENSMUST00000149226 525 ntTSL 2 BASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Gm26353-201ENSMUST00000158224 255 ntBASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Gm3500-202ENSMUST00000178058 609 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Gm25598-201ENSMUST00000179031 107 ntBASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Gm26851-201ENSMUST00000181867 918 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Gm18728-201ENSMUST00000186155 753 ntBASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Gm37932-201ENSMUST00000192258 1167 ntBASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Gm37989-201ENSMUST00000195202 803 ntBASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Gm17935-201ENSMUST00000196649 772 ntBASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Gm8999-201ENSMUST00000204951 969 ntBASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Gm17911-201ENSMUST00000210806 877 ntBASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 AC153544.1-201ENSMUST00000217988 400 ntBASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 AC133598.3-204ENSMUST00000224260 767 ntBASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 AC154354.1-201ENSMUST00000224585 2109 ntBASIC6.42□□□□□ -1.38
Ddx56Q9D0R4 CT033778.1-201ENSMUST00000224767 767 ntBASIC6.42□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms