Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Smc1aQ9CU62 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Smc1aQ9CU62 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
Smc1aQ9CU62 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Smc1aQ9CU62 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Smc1aQ9CU62 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Smc1aQ9CU62 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Smc1aQ9CU62 Olfr1080-201ENSMUST00000213185 1582 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
Smc1aQ9CU62 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Smc1aQ9CU62 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Smc1aQ9CU62 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Smc1aQ9CU62 Gm14930-201ENSMUST00000118864 652 ntBASIC6.33□□□□□ -1.4
Smc1aQ9CU62 Gm12303-201ENSMUST00000119506 673 ntBASIC6.33□□□□□ -1.4
Smc1aQ9CU62 Gm12650-201ENSMUST00000121966 258 ntBASIC6.33□□□□□ -1.4
Smc1aQ9CU62 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC6.33□□□□□ -1.4
Smc1aQ9CU62 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC6.33□□□□□ -1.4
Smc1aQ9CU62 Gm22492-201ENSMUST00000157192 297 ntBASIC6.33□□□□□ -1.4
Smc1aQ9CU62 Gm22867-201ENSMUST00000157499 109 ntBASIC6.33□□□□□ -1.4
Smc1aQ9CU62 Gm21999-201ENSMUST00000165985 387 ntBASIC6.33□□□□□ -1.4
Smc1aQ9CU62 Mir3110-201ENSMUST00000175053 80 ntBASIC6.33□□□□□ -1.4
Smc1aQ9CU62 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC6.33□□□□□ -1.4
Smc1aQ9CU62 Gm21399-201ENSMUST00000180210 597 ntBASIC6.33□□□□□ -1.4
Smc1aQ9CU62 Gm16531-201ENSMUST00000180658 967 ntBASIC6.33□□□□□ -1.4
Smc1aQ9CU62 Gm5430-201ENSMUST00000182525 915 ntBASIC6.33□□□□□ -1.4
Smc1aQ9CU62 Gm8367-201ENSMUST00000186145 887 ntBASIC6.33□□□□□ -1.4
Smc1aQ9CU62 Olfr1252-201ENSMUST00000186710 1099 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Smc1aQ9CU62 Gm21654-201ENSMUST00000188086 691 ntBASIC6.33□□□□□ -1.4
Smc1aQ9CU62 Gm38185-201ENSMUST00000193195 694 ntBASIC6.33□□□□□ -1.4
Smc1aQ9CU62 Gm43467-201ENSMUST00000197441 437 ntBASIC6.33□□□□□ -1.4
Smc1aQ9CU62 Gm42824-201ENSMUST00000199361 247 ntBASIC6.33□□□□□ -1.4
Smc1aQ9CU62 Gm4374-201ENSMUST00000204929 424 ntBASIC6.33□□□□□ -1.4
Smc1aQ9CU62 AC112956.1-201ENSMUST00000213563 492 ntBASIC6.33□□□□□ -1.4
Smc1aQ9CU62 Olfr1245-201ENSMUST00000214870 1062 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Smc1aQ9CU62 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC6.33□□□□□ -1.4
Smc1aQ9CU62 AC110381.1-201ENSMUST00000218987 586 ntBASIC6.33□□□□□ -1.4
Smc1aQ9CU62 AC153800.1-201ENSMUST00000219212 365 ntBASIC6.33□□□□□ -1.4
Smc1aQ9CU62 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC6.33□□□□□ -1.4
Smc1aQ9CU62 AC166358.3-201ENSMUST00000221456 181 ntBASIC6.33□□□□□ -1.4
Smc1aQ9CU62 AC125543.4-201ENSMUST00000223385 117 ntBASIC6.33□□□□□ -1.4
Smc1aQ9CU62 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Smc1aQ9CU62 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Smc1aQ9CU62 Cd160-201ENSMUST00000047702 1121 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Smc1aQ9CU62 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC6.33□□□□□ -1.4
Smc1aQ9CU62 Olfr441-201ENSMUST00000095954 933 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Smc1aQ9CU62 Olfr1016-201ENSMUST00000099915 930 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Smc1aQ9CU62 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Smc1aQ9CU62 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Smc1aQ9CU62 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Smc1aQ9CU62 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Smc1aQ9CU62 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Smc1aQ9CU62 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Smc1aQ9CU62 AC112142.1-203ENSMUST00000228670 2472 ntBASIC6.33□□□□□ -1.4
Smc1aQ9CU62 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Smc1aQ9CU62 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Smc1aQ9CU62 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC6.32□□□□□ -1.4
Smc1aQ9CU62 Olfr497-202ENSMUST00000213521 2396 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
Smc1aQ9CU62 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Smc1aQ9CU62 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Smc1aQ9CU62 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC6.32□□□□□ -1.4
Smc1aQ9CU62 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Smc1aQ9CU62 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Smc1aQ9CU62 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Smc1aQ9CU62 Gm42725-201ENSMUST00000199296 4193 ntBASIC6.32□□□□□ -1.4
Smc1aQ9CU62 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
Smc1aQ9CU62 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Smc1aQ9CU62 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Smc1aQ9CU62 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Smc1aQ9CU62 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC6.32□□□□□ -1.4
Smc1aQ9CU62 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC6.32□□□□□ -1.4
Smc1aQ9CU62 Gm13811-201ENSMUST00000117800 256 ntBASIC6.32□□□□□ -1.4
Smc1aQ9CU62 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Smc1aQ9CU62 Gm5381-201ENSMUST00000117975 1250 ntBASIC6.32□□□□□ -1.4
Smc1aQ9CU62 Gm14220-201ENSMUST00000118114 449 ntBASIC6.32□□□□□ -1.4
Smc1aQ9CU62 Olfr587-ps1-201ENSMUST00000118378 948 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Smc1aQ9CU62 Gm12322-201ENSMUST00000121605 389 ntBASIC6.32□□□□□ -1.4
Smc1aQ9CU62 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC6.32□□□□□ -1.4
Smc1aQ9CU62 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
Smc1aQ9CU62 Mipepos-201ENSMUST00000155855 610 ntTSL 3 BASIC6.32□□□□□ -1.4
Smc1aQ9CU62 Gm25906-201ENSMUST00000158489 126 ntBASIC6.32□□□□□ -1.4
Smc1aQ9CU62 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC6.32□□□□□ -1.4
Smc1aQ9CU62 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
Smc1aQ9CU62 1700034K08Rik-202ENSMUST00000188082 619 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Smc1aQ9CU62 Gm37308-201ENSMUST00000194684 100 ntBASIC6.32□□□□□ -1.4
Smc1aQ9CU62 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC6.32□□□□□ -1.4
Smc1aQ9CU62 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Smc1aQ9CU62 Gm43608-201ENSMUST00000197703 687 ntTSL 3 BASIC6.32□□□□□ -1.4
Smc1aQ9CU62 Gm43054-201ENSMUST00000199495 884 ntBASIC6.32□□□□□ -1.4
Smc1aQ9CU62 Gm5554-201ENSMUST00000199726 1206 ntBASIC6.32□□□□□ -1.4
Smc1aQ9CU62 Mir219c-201ENSMUST00000199860 60 ntBASIC6.32□□□□□ -1.4
Smc1aQ9CU62 Gm19060-201ENSMUST00000201959 421 ntBASIC6.32□□□□□ -1.4
Smc1aQ9CU62 Gm19900-201ENSMUST00000207285 576 ntBASIC6.32□□□□□ -1.4
Smc1aQ9CU62 Gm45874-201ENSMUST00000212423 346 ntBASIC6.32□□□□□ -1.4
Smc1aQ9CU62 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Smc1aQ9CU62 CT033778.1-201ENSMUST00000224767 767 ntBASIC6.32□□□□□ -1.4
Smc1aQ9CU62 AC164302.1-201ENSMUST00000227036 433 ntBASIC6.32□□□□□ -1.4
Smc1aQ9CU62 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Smc1aQ9CU62 Gm18852-201ENSMUST00000184149 3593 ntBASIC6.32□□□□□ -1.4
Smc1aQ9CU62 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Smc1aQ9CU62 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Smc1aQ9CU62 AC156031.1-201ENSMUST00000217288 2555 ntBASIC6.32□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 93.4 ms