Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Use1Q9CQ56 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Use1Q9CQ56 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Use1Q9CQ56 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Use1Q9CQ56 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC5.24□□□□□ -1.57
Use1Q9CQ56 Gm26300-201ENSMUST00000102282 94 ntBASIC5.24□□□□□ -1.57
Use1Q9CQ56 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Use1Q9CQ56 Gm14610-201ENSMUST00000118358 966 ntBASIC5.24□□□□□ -1.57
Use1Q9CQ56 Gm13835-201ENSMUST00000118459 685 ntBASIC5.24□□□□□ -1.57
Use1Q9CQ56 Gm11699-201ENSMUST00000119016 401 ntBASIC5.24□□□□□ -1.57
Use1Q9CQ56 Gm12731-201ENSMUST00000120932 268 ntBASIC5.24□□□□□ -1.57
Use1Q9CQ56 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC5.24□□□□□ -1.57
Use1Q9CQ56 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC5.24□□□□□ -1.57
Use1Q9CQ56 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Use1Q9CQ56 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Use1Q9CQ56 Gm25387-201ENSMUST00000157813 132 ntBASIC5.24□□□□□ -1.57
Use1Q9CQ56 Gm16164-201ENSMUST00000160078 468 ntBASIC5.24□□□□□ -1.57
Use1Q9CQ56 Gm6872-201ENSMUST00000165001 700 ntBASIC5.24□□□□□ -1.57
Use1Q9CQ56 Gm15257-201ENSMUST00000177680 883 ntBASIC5.24□□□□□ -1.57
Use1Q9CQ56 Gm15252-201ENSMUST00000177750 883 ntBASIC5.24□□□□□ -1.57
Use1Q9CQ56 Gm15256-201ENSMUST00000177793 883 ntBASIC5.24□□□□□ -1.57
Use1Q9CQ56 Gm15260-201ENSMUST00000179402 883 ntBASIC5.24□□□□□ -1.57
Use1Q9CQ56 Gm5692-201ENSMUST00000187254 1057 ntBASIC5.24□□□□□ -1.57
Use1Q9CQ56 Gm18799-201ENSMUST00000189104 913 ntBASIC5.24□□□□□ -1.57
Use1Q9CQ56 Gm28883-201ENSMUST00000189256 369 ntBASIC5.24□□□□□ -1.57
Use1Q9CQ56 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC5.24□□□□□ -1.57
Use1Q9CQ56 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC5.24□□□□□ -1.57
Use1Q9CQ56 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC5.24□□□□□ -1.57
Use1Q9CQ56 Gm44432-201ENSMUST00000203342 938 ntBASIC5.24□□□□□ -1.57
Use1Q9CQ56 Gm44422-201ENSMUST00000204142 1025 ntBASIC5.24□□□□□ -1.57
Use1Q9CQ56 Gm18851-201ENSMUST00000210087 1058 ntBASIC5.24□□□□□ -1.57
Use1Q9CQ56 Gm20786-201ENSMUST00000212649 436 ntBASIC5.24□□□□□ -1.57
Use1Q9CQ56 Gm5831-201ENSMUST00000216016 1209 ntBASIC5.24□□□□□ -1.57
Use1Q9CQ56 Gm18510-201ENSMUST00000219335 1096 ntBASIC5.24□□□□□ -1.57
Use1Q9CQ56 AC121137.1-201ENSMUST00000225272 602 ntBASIC5.24□□□□□ -1.57
Use1Q9CQ56 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Use1Q9CQ56 Gm10145-201ENSMUST00000077776 462 ntBASIC5.24□□□□□ -1.57
Use1Q9CQ56 Gm37180-201ENSMUST00000195335 2819 ntBASIC5.24□□□□□ -1.57
Use1Q9CQ56 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
Use1Q9CQ56 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Use1Q9CQ56 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Use1Q9CQ56 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Use1Q9CQ56 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Use1Q9CQ56 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC5.24□□□□□ -1.57
Use1Q9CQ56 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC5.24□□□□□ -1.57
Use1Q9CQ56 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Use1Q9CQ56 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Use1Q9CQ56 AC132852.1-201ENSMUST00000214683 2324 ntBASIC5.24□□□□□ -1.57
Use1Q9CQ56 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC5.24□□□□□ -1.57
Use1Q9CQ56 Gm43921-201ENSMUST00000204296 1792 ntBASIC5.24□□□□□ -1.57
Use1Q9CQ56 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Use1Q9CQ56 Gm37018-201ENSMUST00000192441 3869 ntBASIC5.23□□□□□ -1.57
Use1Q9CQ56 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Use1Q9CQ56 Gm37735-201ENSMUST00000193995 1406 ntBASIC5.23□□□□□ -1.57
Use1Q9CQ56 Gm37776-201ENSMUST00000193471 2497 ntBASIC5.23□□□□□ -1.57
Use1Q9CQ56 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Use1Q9CQ56 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Use1Q9CQ56 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Use1Q9CQ56 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Use1Q9CQ56 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Use1Q9CQ56 Olfr26-201ENSMUST00000104874 931 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Use1Q9CQ56 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Use1Q9CQ56 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Use1Q9CQ56 Gm15331-201ENSMUST00000120225 385 ntBASIC5.23□□□□□ -1.57
Use1Q9CQ56 Gm7571-201ENSMUST00000120252 927 ntBASIC5.23□□□□□ -1.57
Use1Q9CQ56 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC5.23□□□□□ -1.57
Use1Q9CQ56 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Use1Q9CQ56 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Use1Q9CQ56 Gm22223-201ENSMUST00000157360 125 ntBASIC5.23□□□□□ -1.57
Use1Q9CQ56 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Use1Q9CQ56 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC5.23□□□□□ -1.57
Use1Q9CQ56 Tshb-203ENSMUST00000172026 604 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Use1Q9CQ56 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Use1Q9CQ56 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Use1Q9CQ56 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Use1Q9CQ56 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Use1Q9CQ56 Gm8419-201ENSMUST00000189886 412 ntBASIC5.23□□□□□ -1.57
Use1Q9CQ56 Gm37189-201ENSMUST00000192131 298 ntBASIC5.23□□□□□ -1.57
Use1Q9CQ56 Gm38122-201ENSMUST00000192679 885 ntBASIC5.23□□□□□ -1.57
Use1Q9CQ56 Gm37430-201ENSMUST00000193039 196 ntBASIC5.23□□□□□ -1.57
Use1Q9CQ56 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC5.23□□□□□ -1.57
Use1Q9CQ56 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC5.23□□□□□ -1.57
Use1Q9CQ56 Gm45646-201ENSMUST00000210983 441 ntTSL 5 BASIC5.23□□□□□ -1.57
Use1Q9CQ56 Gm45850-201ENSMUST00000212536 338 ntBASIC5.23□□□□□ -1.57
Use1Q9CQ56 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC5.23□□□□□ -1.57
Use1Q9CQ56 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Use1Q9CQ56 Gm18592-201ENSMUST00000221529 276 ntBASIC5.23□□□□□ -1.57
Use1Q9CQ56 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC5.23□□□□□ -1.57
Use1Q9CQ56 AC113198.1-201ENSMUST00000226353 832 ntBASIC5.23□□□□□ -1.57
Use1Q9CQ56 Gm5612-201ENSMUST00000053326 375 ntBASIC5.23□□□□□ -1.57
Use1Q9CQ56 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Use1Q9CQ56 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Use1Q9CQ56 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Use1Q9CQ56 Olfr166-201ENSMUST00000074739 1040 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Use1Q9CQ56 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC5.23□□□□□ -1.57
Use1Q9CQ56 Olfr1254-201ENSMUST00000099764 945 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Use1Q9CQ56 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Use1Q9CQ56 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC5.23□□□□□ -1.57
Use1Q9CQ56 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
Use1Q9CQ56 Gm43426-201ENSMUST00000197287 2597 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms