Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC7.42□□□□□ -1.22
Trim11Q99PQ2 AC159006.2-201ENSMUST00000228734 4144 ntBASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Trim11Q99PQ2 Gm38081-201ENSMUST00000192680 1645 ntBASIC7.41□□□□□ -1.22
Trim11Q99PQ2 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Trim11Q99PQ2 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Trim11Q99PQ2 Gm38124-201ENSMUST00000191710 2581 ntBASIC7.41□□□□□ -1.22
Trim11Q99PQ2 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Trim11Q99PQ2 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Trim11Q99PQ2 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Trim11Q99PQ2 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC7.41□□□□□ -1.22
Trim11Q99PQ2 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Trim11Q99PQ2 Gm12814-201ENSMUST00000117091 846 ntBASIC7.41□□□□□ -1.22
Trim11Q99PQ2 Gm11517-201ENSMUST00000119491 387 ntBASIC7.41□□□□□ -1.22
Trim11Q99PQ2 Gm11746-201ENSMUST00000119843 821 ntBASIC7.41□□□□□ -1.22
Trim11Q99PQ2 Gm13735-201ENSMUST00000120217 670 ntBASIC7.41□□□□□ -1.22
Trim11Q99PQ2 Gm12026-201ENSMUST00000120961 1024 ntBASIC7.41□□□□□ -1.22
Trim11Q99PQ2 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC7.41□□□□□ -1.22
Trim11Q99PQ2 Gm23867-201ENSMUST00000122649 274 ntBASIC7.41□□□□□ -1.22
Trim11Q99PQ2 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC7.41□□□□□ -1.22
Trim11Q99PQ2 4930405H06Rik-201ENSMUST00000159244 791 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Trim11Q99PQ2 Gm16139-201ENSMUST00000160015 420 ntBASIC7.41□□□□□ -1.22
Trim11Q99PQ2 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Trim11Q99PQ2 Vmn1r91-201ENSMUST00000165330 924 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Trim11Q99PQ2 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Trim11Q99PQ2 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Trim11Q99PQ2 Gm29389-201ENSMUST00000191562 352 ntBASIC7.41□□□□□ -1.22
Trim11Q99PQ2 Gm37380-201ENSMUST00000193752 397 ntBASIC7.41□□□□□ -1.22
Trim11Q99PQ2 Ighv1-41-201ENSMUST00000194414 329 ntBASIC7.41□□□□□ -1.22
Trim11Q99PQ2 Gm37637-201ENSMUST00000195540 1256 ntBASIC7.41□□□□□ -1.22
Trim11Q99PQ2 Gm43098-201ENSMUST00000199989 1297 ntBASIC7.41□□□□□ -1.22
Trim11Q99PQ2 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC7.41□□□□□ -1.22
Trim11Q99PQ2 Gm44265-201ENSMUST00000203631 465 ntBASIC7.41□□□□□ -1.22
Trim11Q99PQ2 Gm18127-201ENSMUST00000208479 725 ntBASIC7.41□□□□□ -1.22
Trim11Q99PQ2 Gm9375-201ENSMUST00000208899 903 ntBASIC7.41□□□□□ -1.22
Trim11Q99PQ2 Gm7495-201ENSMUST00000215099 426 ntBASIC7.41□□□□□ -1.22
Trim11Q99PQ2 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Trim11Q99PQ2 AC124450.1-201ENSMUST00000225569 495 ntBASIC7.41□□□□□ -1.22
Trim11Q99PQ2 AC117202.2-201ENSMUST00000226491 1101 ntBASIC7.41□□□□□ -1.22
Trim11Q99PQ2 Anxa13-202ENSMUST00000227274 1201 ntBASIC7.41□□□□□ -1.22
Trim11Q99PQ2 AC174678.3-201ENSMUST00000227568 362 ntBASIC7.41□□□□□ -1.22
Trim11Q99PQ2 Fxyd4-201ENSMUST00000005114 1199 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Trim11Q99PQ2 Olfr535-201ENSMUST00000074897 991 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Trim11Q99PQ2 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC7.41□□□□□ -1.22
Trim11Q99PQ2 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Trim11Q99PQ2 n-R5s217-201ENSMUST00000083341 116 ntBASIC7.41□□□□□ -1.22
Trim11Q99PQ2 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC7.41□□□□□ -1.22
Trim11Q99PQ2 Gm37755-201ENSMUST00000195880 2179 ntBASIC7.41□□□□□ -1.22
Trim11Q99PQ2 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC7.41□□□□□ -1.22
Trim11Q99PQ2 Phxr4-202ENSMUST00000216590 1391 ntBASIC7.41□□□□□ -1.22
Trim11Q99PQ2 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC7.41□□□□□ -1.22
Trim11Q99PQ2 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC7.41□□□□□ -1.22
Trim11Q99PQ2 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC7.41□□□□□ -1.22
Trim11Q99PQ2 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Trim11Q99PQ2 Gm42614-201ENSMUST00000198724 1554 ntBASIC7.41□□□□□ -1.22
Trim11Q99PQ2 Gm37967-201ENSMUST00000195634 2665 ntBASIC7.41□□□□□ -1.22
Trim11Q99PQ2 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Trim11Q99PQ2 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC7.41□□□□□ -1.22
Trim11Q99PQ2 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Trim11Q99PQ2 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC7.4□□□□□ -1.22
Trim11Q99PQ2 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Trim11Q99PQ2 Gm10845-202ENSMUST00000228217 3389 ntBASIC7.4□□□□□ -1.22
Trim11Q99PQ2 Gm43330-201ENSMUST00000199706 2153 ntBASIC7.4□□□□□ -1.22
Trim11Q99PQ2 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Trim11Q99PQ2 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC7.4□□□□□ -1.22
Trim11Q99PQ2 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Trim11Q99PQ2 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Trim11Q99PQ2 Gm25422-201ENSMUST00000104219 129 ntBASIC7.4□□□□□ -1.22
Trim11Q99PQ2 Gm14631-201ENSMUST00000119067 594 ntBASIC7.4□□□□□ -1.22
Trim11Q99PQ2 Gm11976-201ENSMUST00000119236 295 ntBASIC7.4□□□□□ -1.22
Trim11Q99PQ2 Gm5166-201ENSMUST00000121332 573 ntBASIC7.4□□□□□ -1.22
Trim11Q99PQ2 Gm4886-201ENSMUST00000121874 1176 ntBASIC7.4□□□□□ -1.22
Trim11Q99PQ2 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC7.4□□□□□ -1.22
Trim11Q99PQ2 Snrpert-201ENSMUST00000121967 279 ntBASIC7.4□□□□□ -1.22
Trim11Q99PQ2 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Trim11Q99PQ2 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Trim11Q99PQ2 H2-Ea-ps-201ENSMUST00000134042 686 ntBASIC7.4□□□□□ -1.22
Trim11Q99PQ2 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC7.4□□□□□ -1.22
Trim11Q99PQ2 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Trim11Q99PQ2 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Trim11Q99PQ2 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Trim11Q99PQ2 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC7.4□□□□□ -1.22
Trim11Q99PQ2 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Trim11Q99PQ2 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Trim11Q99PQ2 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC7.4□□□□□ -1.22
Trim11Q99PQ2 Gm23379-201ENSMUST00000180026 107 ntBASIC7.4□□□□□ -1.22
Trim11Q99PQ2 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Trim11Q99PQ2 Gm11392-201ENSMUST00000181419 710 ntBASIC7.4□□□□□ -1.22
Trim11Q99PQ2 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC7.4□□□□□ -1.22
Trim11Q99PQ2 Mir7011-201ENSMUST00000183768 73 ntBASIC7.4□□□□□ -1.22
Trim11Q99PQ2 Gm27295-201ENSMUST00000184264 153 ntBASIC7.4□□□□□ -1.22
Trim11Q99PQ2 Gm27299-201ENSMUST00000184593 103 ntBASIC7.4□□□□□ -1.22
Trim11Q99PQ2 Gm27538-201ENSMUST00000185065 294 ntBASIC7.4□□□□□ -1.22
Trim11Q99PQ2 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Trim11Q99PQ2 Vmn1r189-201ENSMUST00000186062 1137 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Trim11Q99PQ2 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC7.4□□□□□ -1.22
Trim11Q99PQ2 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC7.4□□□□□ -1.22
Trim11Q99PQ2 Gm38149-201ENSMUST00000191943 339 ntBASIC7.4□□□□□ -1.22
Trim11Q99PQ2 Gm2622-201ENSMUST00000200018 471 ntBASIC7.4□□□□□ -1.22
Trim11Q99PQ2 Gm31749-201ENSMUST00000206873 598 ntTSL 3 BASIC7.4□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms