Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Gm18702-201ENSMUST00000196923 588 ntBASIC5.72□□□□□ -1.49
Cstf1Q99LC2 Gm7181-201ENSMUST00000202197 434 ntBASIC5.72□□□□□ -1.49
Cstf1Q99LC2 Gm44219-201ENSMUST00000203005 273 ntBASIC5.72□□□□□ -1.49
Cstf1Q99LC2 1700092E16Rik-201ENSMUST00000214766 753 ntBASIC5.72□□□□□ -1.49
Cstf1Q99LC2 Gm8290-201ENSMUST00000218202 477 ntBASIC5.72□□□□□ -1.49
Cstf1Q99LC2 AC159297.1-201ENSMUST00000218689 290 ntBASIC5.72□□□□□ -1.49
Cstf1Q99LC2 Gm18628-201ENSMUST00000220584 475 ntBASIC5.72□□□□□ -1.49
Cstf1Q99LC2 AC211878.1-201ENSMUST00000221668 474 ntBASIC5.72□□□□□ -1.49
Cstf1Q99LC2 AC154484.2-201ENSMUST00000228359 818 ntBASIC5.72□□□□□ -1.49
Cstf1Q99LC2 AC154738.7-201ENSMUST00000228606 579 ntBASIC5.72□□□□□ -1.49
Cstf1Q99LC2 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cstf1Q99LC2 Olfr1257-201ENSMUST00000060795 1016 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Cstf1Q99LC2 Rnase2a-201ENSMUST00000061936 690 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cstf1Q99LC2 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
Cstf1Q99LC2 Olfr1276-201ENSMUST00000073322 939 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Cstf1Q99LC2 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cstf1Q99LC2 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC5.72□□□□□ -1.49
Cstf1Q99LC2 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
Cstf1Q99LC2 Olfr616-202ENSMUST00000214806 1641 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Cstf1Q99LC2 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cstf1Q99LC2 Gm45179-201ENSMUST00000208452 4337 ntBASIC5.72□□□□□ -1.49
Cstf1Q99LC2 Gm45633-201ENSMUST00000210669 3253 ntBASIC5.72□□□□□ -1.49
Cstf1Q99LC2 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cstf1Q99LC2 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Cstf1Q99LC2 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Cstf1Q99LC2 Gm44440-201ENSMUST00000203139 2373 ntBASIC5.72□□□□□ -1.49
Cstf1Q99LC2 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cstf1Q99LC2 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
Cstf1Q99LC2 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cstf1Q99LC2 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Cstf1Q99LC2 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC5.71□□□□□ -1.49
Cstf1Q99LC2 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Cstf1Q99LC2 Odam-202ENSMUST00000129757 1370 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Cstf1Q99LC2 Gm37079-201ENSMUST00000194114 2135 ntBASIC5.71□□□□□ -1.5
Cstf1Q99LC2 Gm43469-201ENSMUST00000196084 4634 ntBASIC5.71□□□□□ -1.5
Cstf1Q99LC2 Gm43363-201ENSMUST00000201590 2647 ntBASIC5.71□□□□□ -1.5
Cstf1Q99LC2 Gm14988-201ENSMUST00000117224 1548 ntBASIC5.71□□□□□ -1.5
Cstf1Q99LC2 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Cstf1Q99LC2 Gm13866-201ENSMUST00000118901 968 ntBASIC5.71□□□□□ -1.5
Cstf1Q99LC2 Gm13338-201ENSMUST00000120235 361 ntBASIC5.71□□□□□ -1.5
Cstf1Q99LC2 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC5.71□□□□□ -1.5
Cstf1Q99LC2 Gm7309-201ENSMUST00000121670 581 ntBASIC5.71□□□□□ -1.5
Cstf1Q99LC2 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC5.71□□□□□ -1.5
Cstf1Q99LC2 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC5.71□□□□□ -1.5
Cstf1Q99LC2 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC5.71□□□□□ -1.5
Cstf1Q99LC2 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC5.71□□□□□ -1.5
Cstf1Q99LC2 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC5.71□□□□□ -1.5
Cstf1Q99LC2 Gm22214-201ENSMUST00000157563 172 ntBASIC5.71□□□□□ -1.5
Cstf1Q99LC2 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Cstf1Q99LC2 Gm17046-201ENSMUST00000168078 850 ntBASIC5.71□□□□□ -1.5
Cstf1Q99LC2 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC5.71□□□□□ -1.5
Cstf1Q99LC2 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Cstf1Q99LC2 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC5.71□□□□□ -1.5
Cstf1Q99LC2 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Cstf1Q99LC2 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Cstf1Q99LC2 Gm18215-201ENSMUST00000204429 798 ntBASIC5.71□□□□□ -1.5
Cstf1Q99LC2 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
Cstf1Q99LC2 Gm8523-201ENSMUST00000211386 552 ntBASIC5.71□□□□□ -1.5
Cstf1Q99LC2 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC5.71□□□□□ -1.5
Cstf1Q99LC2 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC5.71□□□□□ -1.5
Cstf1Q99LC2 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC5.71□□□□□ -1.5
Cstf1Q99LC2 AC153845.2-203ENSMUST00000215889 617 ntTSL 3 BASIC5.71□□□□□ -1.5
Cstf1Q99LC2 AC117240.2-201ENSMUST00000220921 263 ntBASIC5.71□□□□□ -1.5
Cstf1Q99LC2 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Cstf1Q99LC2 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Cstf1Q99LC2 Olfr866-201ENSMUST00000062248 1077 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Cstf1Q99LC2 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Cstf1Q99LC2 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Cstf1Q99LC2 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Cstf1Q99LC2 Gm37082-201ENSMUST00000192629 1927 ntBASIC5.71□□□□□ -1.5
Cstf1Q99LC2 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Cstf1Q99LC2 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Cstf1Q99LC2 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Cstf1Q99LC2 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Cstf1Q99LC2 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Cstf1Q99LC2 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Cstf1Q99LC2 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Cstf1Q99LC2 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Cstf1Q99LC2 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Cstf1Q99LC2 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC5.71□□□□□ -1.5
Cstf1Q99LC2 Gm5844-201ENSMUST00000119417 2191 ntBASIC5.7□□□□□ -1.5
Cstf1Q99LC2 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC5.7□□□□□ -1.5
Cstf1Q99LC2 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
Cstf1Q99LC2 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Cstf1Q99LC2 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Cstf1Q99LC2 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Cstf1Q99LC2 Gm37132-201ENSMUST00000195553 2238 ntBASIC5.7□□□□□ -1.5
Cstf1Q99LC2 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC5.7□□□□□ -1.5
Cstf1Q99LC2 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
Cstf1Q99LC2 n-R5s82-201ENSMUST00000104213 109 ntBASIC5.7□□□□□ -1.5
Cstf1Q99LC2 Gm13690-201ENSMUST00000118989 285 ntBASIC5.7□□□□□ -1.5
Cstf1Q99LC2 Gm6175-201ENSMUST00000121351 400 ntBASIC5.7□□□□□ -1.5
Cstf1Q99LC2 Gm13077-201ENSMUST00000121941 484 ntBASIC5.7□□□□□ -1.5
Cstf1Q99LC2 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Cstf1Q99LC2 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Cstf1Q99LC2 Gm20674-201ENSMUST00000177452 369 ntBASIC5.7□□□□□ -1.5
Cstf1Q99LC2 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Cstf1Q99LC2 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Cstf1Q99LC2 Gm9320-201ENSMUST00000184151 473 ntBASIC5.7□□□□□ -1.5
Cstf1Q99LC2 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms