Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ccdc28aQ8CEI3 Gm24235-201ENSMUST00000104319 129 ntBASIC5.67□□□□□ -1.5
Ccdc28aQ8CEI3 Lrrc69-202ENSMUST00000108276 1210 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ccdc28aQ8CEI3 Gm6884-201ENSMUST00000119318 615 ntBASIC5.67□□□□□ -1.5
Ccdc28aQ8CEI3 Gm14106-201ENSMUST00000119382 438 ntBASIC5.67□□□□□ -1.5
Ccdc28aQ8CEI3 Hspe1-ps4-201ENSMUST00000119538 286 ntBASIC5.67□□□□□ -1.5
Ccdc28aQ8CEI3 Gm15034-201ENSMUST00000120043 349 ntBASIC5.67□□□□□ -1.5
Ccdc28aQ8CEI3 Gm11278-201ENSMUST00000121002 997 ntBASIC5.67□□□□□ -1.5
Ccdc28aQ8CEI3 Gm13077-201ENSMUST00000121941 484 ntBASIC5.67□□□□□ -1.5
Ccdc28aQ8CEI3 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC5.67□□□□□ -1.5
Ccdc28aQ8CEI3 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC5.67□□□□□ -1.5
Ccdc28aQ8CEI3 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC5.67□□□□□ -1.5
Ccdc28aQ8CEI3 Gm15995-201ENSMUST00000159897 574 ntTSL 5 BASIC5.67□□□□□ -1.5
Ccdc28aQ8CEI3 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
Ccdc28aQ8CEI3 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Ccdc28aQ8CEI3 Gm18702-201ENSMUST00000196923 588 ntBASIC5.67□□□□□ -1.5
Ccdc28aQ8CEI3 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC5.67□□□□□ -1.5
Ccdc28aQ8CEI3 Gm44374-201ENSMUST00000199821 140 ntBASIC5.67□□□□□ -1.5
Ccdc28aQ8CEI3 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Ccdc28aQ8CEI3 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Ccdc28aQ8CEI3 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC5.67□□□□□ -1.5
Ccdc28aQ8CEI3 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC5.67□□□□□ -1.5
Ccdc28aQ8CEI3 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Ccdc28aQ8CEI3 AC073562.1-201ENSMUST00000222117 401 ntBASIC5.67□□□□□ -1.5
Ccdc28aQ8CEI3 AC165260.4-201ENSMUST00000225924 724 ntBASIC5.67□□□□□ -1.5
Ccdc28aQ8CEI3 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Ccdc28aQ8CEI3 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Ccdc28aQ8CEI3 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ccdc28aQ8CEI3 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ccdc28aQ8CEI3 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Ccdc28aQ8CEI3 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ccdc28aQ8CEI3 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC5.67□□□□□ -1.5
Ccdc28aQ8CEI3 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ccdc28aQ8CEI3 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ccdc28aQ8CEI3 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ccdc28aQ8CEI3 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Ccdc28aQ8CEI3 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Ccdc28aQ8CEI3 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Ccdc28aQ8CEI3 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Ccdc28aQ8CEI3 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
Ccdc28aQ8CEI3 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Ccdc28aQ8CEI3 Gm43175-201ENSMUST00000198450 3810 ntBASIC5.66□□□□□ -1.5
Ccdc28aQ8CEI3 Gm44894-201ENSMUST00000205280 2174 ntBASIC5.66□□□□□ -1.5
Ccdc28aQ8CEI3 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC5.66□□□□□ -1.5
Ccdc28aQ8CEI3 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC5.66□□□□□ -1.5
Ccdc28aQ8CEI3 Gm43588-201ENSMUST00000201862 2298 ntBASIC5.66□□□□□ -1.5
Ccdc28aQ8CEI3 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC5.66□□□□□ -1.5
Ccdc28aQ8CEI3 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Ccdc28aQ8CEI3 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC5.66□□□□□ -1.5
Ccdc28aQ8CEI3 Gm13679-201ENSMUST00000118678 484 ntBASIC5.66□□□□□ -1.5
Ccdc28aQ8CEI3 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Ccdc28aQ8CEI3 Gm26410-201ENSMUST00000157670 261 ntBASIC5.66□□□□□ -1.5
Ccdc28aQ8CEI3 Gm9597-201ENSMUST00000171913 602 ntBASIC5.66□□□□□ -1.5
Ccdc28aQ8CEI3 Gm2058-201ENSMUST00000178791 560 ntBASIC5.66□□□□□ -1.5
Ccdc28aQ8CEI3 Gm16531-201ENSMUST00000180658 967 ntBASIC5.66□□□□□ -1.5
Ccdc28aQ8CEI3 Gm26877-201ENSMUST00000180728 633 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Ccdc28aQ8CEI3 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC5.66□□□□□ -1.5
Ccdc28aQ8CEI3 Gm27266-201ENSMUST00000184521 123 ntBASIC5.66□□□□□ -1.5
Ccdc28aQ8CEI3 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC5.66□□□□□ -1.5
Ccdc28aQ8CEI3 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Ccdc28aQ8CEI3 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC5.66□□□□□ -1.5
Ccdc28aQ8CEI3 Gm44412-201ENSMUST00000203018 294 ntBASIC5.66□□□□□ -1.5
Ccdc28aQ8CEI3 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC5.66□□□□□ -1.5
Ccdc28aQ8CEI3 AC112680.2-201ENSMUST00000213119 595 ntBASIC5.66□□□□□ -1.5
Ccdc28aQ8CEI3 AC153961.1-201ENSMUST00000217760 385 ntBASIC5.66□□□□□ -1.5
Ccdc28aQ8CEI3 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC5.66□□□□□ -1.5
Ccdc28aQ8CEI3 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ccdc28aQ8CEI3 AC164426.1-201ENSMUST00000225745 929 ntBASIC5.66□□□□□ -1.5
Ccdc28aQ8CEI3 AC124709.3-201ENSMUST00000227294 171 ntBASIC5.66□□□□□ -1.5
Ccdc28aQ8CEI3 AC154618.2-201ENSMUST00000228299 452 ntBASIC5.66□□□□□ -1.5
Ccdc28aQ8CEI3 AC154627.3-201ENSMUST00000228441 334 ntBASIC5.66□□□□□ -1.5
Ccdc28aQ8CEI3 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ccdc28aQ8CEI3 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ccdc28aQ8CEI3 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Ccdc28aQ8CEI3 Gm43062-201ENSMUST00000196302 1319 ntBASIC5.66□□□□□ -1.5
Ccdc28aQ8CEI3 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
Ccdc28aQ8CEI3 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Ccdc28aQ8CEI3 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ccdc28aQ8CEI3 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Ccdc28aQ8CEI3 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
Ccdc28aQ8CEI3 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Ccdc28aQ8CEI3 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC5.66□□□□□ -1.5
Ccdc28aQ8CEI3 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Ccdc28aQ8CEI3 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Ccdc28aQ8CEI3 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Ccdc28aQ8CEI3 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC5.65□□□□□ -1.5
Ccdc28aQ8CEI3 Olfr479-203ENSMUST00000214599 3248 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Ccdc28aQ8CEI3 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Ccdc28aQ8CEI3 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Ccdc28aQ8CEI3 Gm44255-201ENSMUST00000203456 2053 ntBASIC5.65□□□□□ -1.5
Ccdc28aQ8CEI3 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
Ccdc28aQ8CEI3 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Ccdc28aQ8CEI3 Gm29488-201ENSMUST00000191427 2402 ntBASIC5.65□□□□□ -1.5
Ccdc28aQ8CEI3 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC5.65□□□□□ -1.5
Ccdc28aQ8CEI3 Gm43386-201ENSMUST00000199654 4001 ntBASIC5.65□□□□□ -1.5
Ccdc28aQ8CEI3 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Ccdc28aQ8CEI3 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC5.65□□□□□ -1.5
Ccdc28aQ8CEI3 Gm37132-201ENSMUST00000195553 2238 ntBASIC5.65□□□□□ -1.5
Ccdc28aQ8CEI3 Gm23739-201ENSMUST00000102295 108 ntBASIC5.65□□□□□ -1.5
Ccdc28aQ8CEI3 Gm12677-201ENSMUST00000118668 426 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms