Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC6.6□□□□□ -1.35
Nup88Q8CEC0 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Nup88Q8CEC0 Gm38105-201ENSMUST00000192112 2621 ntBASIC6.6□□□□□ -1.35
Nup88Q8CEC0 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Nup88Q8CEC0 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC6.59□□□□□ -1.35
Nup88Q8CEC0 AW046200-203ENSMUST00000211787 2479 ntBASIC6.59□□□□□ -1.35
Nup88Q8CEC0 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Nup88Q8CEC0 Gm38248-201ENSMUST00000193744 5783 ntBASIC6.59□□□□□ -1.35
Nup88Q8CEC0 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC6.59□□□□□ -1.35
Nup88Q8CEC0 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Nup88Q8CEC0 Gm37249-201ENSMUST00000195185 2869 ntBASIC6.59□□□□□ -1.35
Nup88Q8CEC0 Gm24230-201ENSMUST00000104313 129 ntBASIC6.59□□□□□ -1.35
Nup88Q8CEC0 Gm13363-201ENSMUST00000122008 522 ntBASIC6.59□□□□□ -1.35
Nup88Q8CEC0 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Nup88Q8CEC0 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Nup88Q8CEC0 Gm27037-201ENSMUST00000182270 960 ntBASIC6.59□□□□□ -1.35
Nup88Q8CEC0 Gm37308-201ENSMUST00000194684 100 ntBASIC6.59□□□□□ -1.35
Nup88Q8CEC0 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC6.59□□□□□ -1.35
Nup88Q8CEC0 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC6.59□□□□□ -1.35
Nup88Q8CEC0 Olfr878-202ENSMUST00000212878 1064 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Nup88Q8CEC0 Gm10709-201ENSMUST00000213318 480 ntBASIC6.59□□□□□ -1.35
Nup88Q8CEC0 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC6.59□□□□□ -1.35
Nup88Q8CEC0 AC121947.1-201ENSMUST00000221755 1145 ntBASIC6.59□□□□□ -1.35
Nup88Q8CEC0 Gm32526-201ENSMUST00000221878 981 ntBASIC6.59□□□□□ -1.35
Nup88Q8CEC0 CT033778.1-201ENSMUST00000224767 767 ntBASIC6.59□□□□□ -1.35
Nup88Q8CEC0 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
Nup88Q8CEC0 n-R5s161-201ENSMUST00000083728 114 ntBASIC6.59□□□□□ -1.35
Nup88Q8CEC0 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Nup88Q8CEC0 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Nup88Q8CEC0 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
Nup88Q8CEC0 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Nup88Q8CEC0 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Nup88Q8CEC0 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Nup88Q8CEC0 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Nup88Q8CEC0 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Nup88Q8CEC0 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
Nup88Q8CEC0 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC6.59□□□□□ -1.36
Nup88Q8CEC0 Gm37370-201ENSMUST00000191996 1410 ntBASIC6.59□□□□□ -1.36
Nup88Q8CEC0 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Nup88Q8CEC0 Gm37082-201ENSMUST00000192629 1927 ntBASIC6.58□□□□□ -1.36
Nup88Q8CEC0 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC6.58□□□□□ -1.36
Nup88Q8CEC0 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Nup88Q8CEC0 Gm37846-201ENSMUST00000191840 3774 ntBASIC6.58□□□□□ -1.36
Nup88Q8CEC0 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Nup88Q8CEC0 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Nup88Q8CEC0 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Nup88Q8CEC0 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC6.58□□□□□ -1.36
Nup88Q8CEC0 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Nup88Q8CEC0 Gm24886-201ENSMUST00000104384 123 ntBASIC6.58□□□□□ -1.36
Nup88Q8CEC0 Gm22194-201ENSMUST00000116869 95 ntBASIC6.58□□□□□ -1.36
Nup88Q8CEC0 Gm13473-201ENSMUST00000119289 367 ntBASIC6.58□□□□□ -1.36
Nup88Q8CEC0 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Nup88Q8CEC0 Gm18343-201ENSMUST00000172802 604 ntBASIC6.58□□□□□ -1.36
Nup88Q8CEC0 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
Nup88Q8CEC0 Vis1-201ENSMUST00000183957 201 ntBASIC6.58□□□□□ -1.36
Nup88Q8CEC0 Gm28188-201ENSMUST00000190483 236 ntBASIC6.58□□□□□ -1.36
Nup88Q8CEC0 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC6.58□□□□□ -1.36
Nup88Q8CEC0 Gm38040-201ENSMUST00000193505 225 ntBASIC6.58□□□□□ -1.36
Nup88Q8CEC0 Gm37681-201ENSMUST00000193880 727 ntBASIC6.58□□□□□ -1.36
Nup88Q8CEC0 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC6.58□□□□□ -1.36
Nup88Q8CEC0 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Nup88Q8CEC0 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC6.58□□□□□ -1.36
Nup88Q8CEC0 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC6.58□□□□□ -1.36
Nup88Q8CEC0 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC6.58□□□□□ -1.36
Nup88Q8CEC0 AC122332.1-201ENSMUST00000214384 285 ntBASIC6.58□□□□□ -1.36
Nup88Q8CEC0 AC124408.2-201ENSMUST00000228168 645 ntBASIC6.58□□□□□ -1.36
Nup88Q8CEC0 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Nup88Q8CEC0 Olfr161-201ENSMUST00000061541 942 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Nup88Q8CEC0 Snora30-201ENSMUST00000083325 130 ntBASIC6.58□□□□□ -1.36
Nup88Q8CEC0 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Nup88Q8CEC0 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC6.58□□□□□ -1.36
Nup88Q8CEC0 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC6.58□□□□□ -1.36
Nup88Q8CEC0 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Nup88Q8CEC0 AC152944.1-201ENSMUST00000220160 3101 ntBASIC6.58□□□□□ -1.36
Nup88Q8CEC0 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Nup88Q8CEC0 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Nup88Q8CEC0 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Nup88Q8CEC0 AL591843.1-201ENSMUST00000223686 3082 ntBASIC6.58□□□□□ -1.36
Nup88Q8CEC0 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Nup88Q8CEC0 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Nup88Q8CEC0 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Nup88Q8CEC0 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Nup88Q8CEC0 Gm37332-201ENSMUST00000195853 2844 ntBASIC6.57□□□□□ -1.36
Nup88Q8CEC0 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
Nup88Q8CEC0 Gm14836-201ENSMUST00000118567 471 ntBASIC6.57□□□□□ -1.36
Nup88Q8CEC0 Gm15971-201ENSMUST00000119372 211 ntBASIC6.57□□□□□ -1.36
Nup88Q8CEC0 Gm12303-201ENSMUST00000119506 673 ntBASIC6.57□□□□□ -1.36
Nup88Q8CEC0 Gm5405-201ENSMUST00000120478 609 ntBASIC6.57□□□□□ -1.36
Nup88Q8CEC0 Gm11369-201ENSMUST00000120812 318 ntBASIC6.57□□□□□ -1.36
Nup88Q8CEC0 Gm24236-201ENSMUST00000157794 134 ntBASIC6.57□□□□□ -1.36
Nup88Q8CEC0 Gm25489-201ENSMUST00000158727 141 ntBASIC6.57□□□□□ -1.36
Nup88Q8CEC0 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC6.57□□□□□ -1.36
Nup88Q8CEC0 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC6.57□□□□□ -1.36
Nup88Q8CEC0 Trbv27-201ENSMUST00000193711 277 ntBASIC6.57□□□□□ -1.36
Nup88Q8CEC0 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC6.57□□□□□ -1.36
Nup88Q8CEC0 Igkv3-8-201ENSMUST00000197635 339 ntBASIC6.57□□□□□ -1.36
Nup88Q8CEC0 Olfr519-202ENSMUST00000202706 945 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Nup88Q8CEC0 AC079644.3-201ENSMUST00000222452 357 ntBASIC6.57□□□□□ -1.36
Nup88Q8CEC0 Gm18247-201ENSMUST00000222937 601 ntBASIC6.57□□□□□ -1.36
Nup88Q8CEC0 CT025552.1-201ENSMUST00000224561 521 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms