Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm24719-201ENSMUST00000157520 110 ntBASIC5.62□□□□□ -1.51
Trub1Q8C0D0 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Trub1Q8C0D0 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Trub1Q8C0D0 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Trub1Q8C0D0 Gm37375-201ENSMUST00000193859 387 ntBASIC5.62□□□□□ -1.51
Trub1Q8C0D0 Gm37385-201ENSMUST00000195223 387 ntBASIC5.62□□□□□ -1.51
Trub1Q8C0D0 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Trub1Q8C0D0 Gm43798-201ENSMUST00000202056 394 ntBASIC5.62□□□□□ -1.51
Trub1Q8C0D0 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC5.62□□□□□ -1.51
Trub1Q8C0D0 Gm45750-201ENSMUST00000211966 354 ntBASIC5.62□□□□□ -1.51
Trub1Q8C0D0 AC160413.1-201ENSMUST00000217909 932 ntTSL 5 BASIC5.62□□□□□ -1.51
Trub1Q8C0D0 AC079644.3-201ENSMUST00000222452 357 ntBASIC5.62□□□□□ -1.51
Trub1Q8C0D0 Gm18247-201ENSMUST00000222937 601 ntBASIC5.62□□□□□ -1.51
Trub1Q8C0D0 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Trub1Q8C0D0 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Trub1Q8C0D0 Olfr116-201ENSMUST00000072265 966 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Trub1Q8C0D0 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC5.62□□□□□ -1.51
Trub1Q8C0D0 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Trub1Q8C0D0 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
Trub1Q8C0D0 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Trub1Q8C0D0 CT025675.1-201ENSMUST00000228171 1567 ntBASIC5.62□□□□□ -1.51
Trub1Q8C0D0 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Trub1Q8C0D0 Gm44424-201ENSMUST00000203438 1826 ntBASIC5.62□□□□□ -1.51
Trub1Q8C0D0 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Trub1Q8C0D0 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC5.61□□□□□ -1.51
Trub1Q8C0D0 Gm42930-201ENSMUST00000200872 3260 ntBASIC5.61□□□□□ -1.51
Trub1Q8C0D0 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Trub1Q8C0D0 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Trub1Q8C0D0 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
Trub1Q8C0D0 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC5.61□□□□□ -1.51
Trub1Q8C0D0 Eaf2-203ENSMUST00000114825 668 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Trub1Q8C0D0 Gm15048-201ENSMUST00000118201 954 ntBASIC5.61□□□□□ -1.51
Trub1Q8C0D0 Gm12281-201ENSMUST00000119536 298 ntBASIC5.61□□□□□ -1.51
Trub1Q8C0D0 Olfr1069-ps1-201ENSMUST00000120755 965 ntBASIC5.61□□□□□ -1.51
Trub1Q8C0D0 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC5.61□□□□□ -1.51
Trub1Q8C0D0 Gm25489-201ENSMUST00000158727 141 ntBASIC5.61□□□□□ -1.51
Trub1Q8C0D0 Olfr102-201ENSMUST00000169373 1027 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Trub1Q8C0D0 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Trub1Q8C0D0 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC5.61□□□□□ -1.51
Trub1Q8C0D0 Gm5946-201ENSMUST00000182340 970 ntBASIC5.61□□□□□ -1.51
Trub1Q8C0D0 Mir7220-201ENSMUST00000183978 60 ntBASIC5.61□□□□□ -1.51
Trub1Q8C0D0 Gm27781-201ENSMUST00000185185 92 ntBASIC5.61□□□□□ -1.51
Trub1Q8C0D0 Gm8581-201ENSMUST00000188636 890 ntBASIC5.61□□□□□ -1.51
Trub1Q8C0D0 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
Trub1Q8C0D0 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC5.61□□□□□ -1.51
Trub1Q8C0D0 Pomp-203ENSMUST00000201376 383 ntTSL 3 BASIC5.61□□□□□ -1.51
Trub1Q8C0D0 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC5.61□□□□□ -1.51
Trub1Q8C0D0 Olfr878-202ENSMUST00000212878 1064 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Trub1Q8C0D0 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC5.61□□□□□ -1.51
Trub1Q8C0D0 AC151971.5-201ENSMUST00000214422 3254 ntBASIC5.61□□□□□ -1.51
Trub1Q8C0D0 Olfr915-201ENSMUST00000215191 933 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Trub1Q8C0D0 Gm7680-201ENSMUST00000216198 1348 ntBASIC5.61□□□□□ -1.51
Trub1Q8C0D0 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Trub1Q8C0D0 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC5.61□□□□□ -1.51
Trub1Q8C0D0 AC137117.1-201ENSMUST00000226912 441 ntBASIC5.61□□□□□ -1.51
Trub1Q8C0D0 AC154806.3-201ENSMUST00000227376 439 ntBASIC5.61□□□□□ -1.51
Trub1Q8C0D0 Olfr734-201ENSMUST00000050928 1033 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Trub1Q8C0D0 Olfr137-201ENSMUST00000057394 942 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Trub1Q8C0D0 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Trub1Q8C0D0 Olfr836-201ENSMUST00000074986 955 ntAPPRIS P2 BASIC5.61□□□□□ -1.51
Trub1Q8C0D0 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Trub1Q8C0D0 Olfr878-201ENSMUST00000086061 1065 ntBASIC5.61□□□□□ -1.51
Trub1Q8C0D0 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC5.61□□□□□ -1.51
Trub1Q8C0D0 Olfr145-201ENSMUST00000086062 6796 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Trub1Q8C0D0 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC5.61□□□□□ -1.51
Trub1Q8C0D0 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Trub1Q8C0D0 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
Trub1Q8C0D0 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC5.6□□□□□ -1.51
Trub1Q8C0D0 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC5.6□□□□□ -1.51
Trub1Q8C0D0 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC5.6□□□□□ -1.51
Trub1Q8C0D0 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Trub1Q8C0D0 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Trub1Q8C0D0 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Trub1Q8C0D0 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Trub1Q8C0D0 Gm43437-201ENSMUST00000198535 3955 ntBASIC5.6□□□□□ -1.51
Trub1Q8C0D0 Gm42798-201ENSMUST00000200853 3972 ntBASIC5.6□□□□□ -1.51
Trub1Q8C0D0 Gm13681-201ENSMUST00000117925 210 ntBASIC5.6□□□□□ -1.51
Trub1Q8C0D0 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Trub1Q8C0D0 Gm12244-201ENSMUST00000119500 291 ntBASIC5.6□□□□□ -1.51
Trub1Q8C0D0 Gm14831-201ENSMUST00000120253 409 ntBASIC5.6□□□□□ -1.51
Trub1Q8C0D0 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Trub1Q8C0D0 Gm25152-201ENSMUST00000157117 114 ntBASIC5.6□□□□□ -1.51
Trub1Q8C0D0 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC5.6□□□□□ -1.51
Trub1Q8C0D0 Ear-ps5-201ENSMUST00000164700 463 ntBASIC5.6□□□□□ -1.51
Trub1Q8C0D0 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Trub1Q8C0D0 Gm17223-201ENSMUST00000171413 481 ntBASIC5.6□□□□□ -1.51
Trub1Q8C0D0 Gm21909-201ENSMUST00000178260 439 ntBASIC5.6□□□□□ -1.51
Trub1Q8C0D0 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC5.6□□□□□ -1.51
Trub1Q8C0D0 Gm28188-201ENSMUST00000190483 236 ntBASIC5.6□□□□□ -1.51
Trub1Q8C0D0 Gm44463-201ENSMUST00000198895 137 ntBASIC5.6□□□□□ -1.51
Trub1Q8C0D0 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC5.6□□□□□ -1.51
Trub1Q8C0D0 Gm34149-201ENSMUST00000203547 304 ntBASIC5.6□□□□□ -1.51
Trub1Q8C0D0 Hddc3-209ENSMUST00000206480 454 ntTSL 2 BASIC5.6□□□□□ -1.51
Trub1Q8C0D0 AC123665.4-201ENSMUST00000228790 249 ntBASIC5.6□□□□□ -1.51
Trub1Q8C0D0 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Trub1Q8C0D0 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Trub1Q8C0D0 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Trub1Q8C0D0 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Trub1Q8C0D0 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Trub1Q8C0D0 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms