Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Gm2020-201ENSMUST00000145242 579 ntBASIC5.74□□□□□ -1.49
Foxc1Q61572 Zfp661-204ENSMUST00000164551 1284 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
Foxc1Q61572 Gm17149-201ENSMUST00000164712 375 ntBASIC5.74□□□□□ -1.49
Foxc1Q61572 Gm17538-201ENSMUST00000168236 327 ntBASIC5.74□□□□□ -1.49
Foxc1Q61572 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC5.74□□□□□ -1.49
Foxc1Q61572 Gm7952-201ENSMUST00000180540 984 ntBASIC5.74□□□□□ -1.49
Foxc1Q61572 Gm27699-201ENSMUST00000183553 180 ntBASIC5.74□□□□□ -1.49
Foxc1Q61572 Krtdap-203ENSMUST00000187493 420 ntTSL 2 BASIC5.74□□□□□ -1.49
Foxc1Q61572 Gm28974-201ENSMUST00000187893 231 ntBASIC5.74□□□□□ -1.49
Foxc1Q61572 Gm29201-201ENSMUST00000189120 431 ntBASIC5.74□□□□□ -1.49
Foxc1Q61572 Krtdap-205ENSMUST00000189673 345 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Foxc1Q61572 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Foxc1Q61572 Gm37603-201ENSMUST00000192368 219 ntBASIC5.74□□□□□ -1.49
Foxc1Q61572 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC5.74□□□□□ -1.49
Foxc1Q61572 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC5.74□□□□□ -1.49
Foxc1Q61572 Gm36996-201ENSMUST00000194466 250 ntBASIC5.74□□□□□ -1.49
Foxc1Q61572 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC5.74□□□□□ -1.49
Foxc1Q61572 Mir142-201ENSMUST00000198092 64 ntBASIC5.74□□□□□ -1.49
Foxc1Q61572 Gm43083-201ENSMUST00000199594 476 ntBASIC5.74□□□□□ -1.49
Foxc1Q61572 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC5.74□□□□□ -1.49
Foxc1Q61572 Gm44691-201ENSMUST00000207562 324 ntTSL 5 BASIC5.74□□□□□ -1.49
Foxc1Q61572 Gm34418-201ENSMUST00000212879 309 ntTSL 5 BASIC5.74□□□□□ -1.49
Foxc1Q61572 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC5.74□□□□□ -1.49
Foxc1Q61572 CR974592.1-201ENSMUST00000220422 574 ntBASIC5.74□□□□□ -1.49
Foxc1Q61572 Gm36501-201ENSMUST00000221857 745 ntBASIC5.74□□□□□ -1.49
Foxc1Q61572 AC163038.4-201ENSMUST00000224942 474 ntBASIC5.74□□□□□ -1.49
Foxc1Q61572 CT009711.2-201ENSMUST00000225352 934 ntBASIC5.74□□□□□ -1.49
Foxc1Q61572 AC134420.1-201ENSMUST00000227027 289 ntBASIC5.74□□□□□ -1.49
Foxc1Q61572 AC167013.2-202ENSMUST00000227035 333 ntBASIC5.74□□□□□ -1.49
Foxc1Q61572 AC122858.1-202ENSMUST00000228290 986 ntBASIC5.74□□□□□ -1.49
Foxc1Q61572 9230104L09Rik-201ENSMUST00000028937 661 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Foxc1Q61572 1700001C02Rik-201ENSMUST00000031078 731 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Foxc1Q61572 Gkn2-201ENSMUST00000032128 788 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Foxc1Q61572 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Foxc1Q61572 Dgkb-201ENSMUST00000040500 6373 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Foxc1Q61572 Olfr1449-201ENSMUST00000056005 948 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Foxc1Q61572 Cytl1-201ENSMUST00000073554 974 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Foxc1Q61572 Gm16415-201ENSMUST00000080097 489 ntBASIC5.74□□□□□ -1.49
Foxc1Q61572 Gm23627-201ENSMUST00000082459 107 ntBASIC5.74□□□□□ -1.49
Foxc1Q61572 Gm22502-201ENSMUST00000082488 107 ntBASIC5.74□□□□□ -1.49
Foxc1Q61572 Snord42a-201ENSMUST00000082606 65 ntBASIC5.74□□□□□ -1.49
Foxc1Q61572 Gm24149-201ENSMUST00000082757 107 ntBASIC5.74□□□□□ -1.49
Foxc1Q61572 Gm17165-201ENSMUST00000096155 493 ntBASIC5.74□□□□□ -1.49
Foxc1Q61572 Gm44141-201ENSMUST00000204231 1583 ntBASIC5.74□□□□□ -1.49
Foxc1Q61572 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Foxc1Q61572 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Foxc1Q61572 BC049715-203ENSMUST00000203499 2057 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Foxc1Q61572 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Foxc1Q61572 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Foxc1Q61572 Gm37776-201ENSMUST00000193471 2497 ntBASIC5.74□□□□□ -1.49
Foxc1Q61572 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Foxc1Q61572 Nox1-201ENSMUST00000033610 2563 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Foxc1Q61572 Adgrf4-204ENSMUST00000170723 2751 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Foxc1Q61572 Parp8-203ENSMUST00000223949 2965 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Foxc1Q61572 Fbxw10-201ENSMUST00000036085 3354 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Foxc1Q61572 Ivd-201ENSMUST00000028807 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Foxc1Q61572 Gprasp1-206ENSMUST00000166554 4993 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Foxc1Q61572 Gm340-201ENSMUST00000172371 3729 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Foxc1Q61572 Brd8-202ENSMUST00000097626 3005 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Foxc1Q61572 Gm43398-201ENSMUST00000196584 2742 ntBASIC5.74□□□□□ -1.49
Foxc1Q61572 Pgbd1-205ENSMUST00000151743 2642 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
Foxc1Q61572 Mas1-201ENSMUST00000089015 2401 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Foxc1Q61572 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC5.74□□□□□ -1.49
Foxc1Q61572 Olfr43-202ENSMUST00000205664 2018 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
Foxc1Q61572 5530400K19Rik-201ENSMUST00000193511 1916 ntBASIC5.74□□□□□ -1.49
Foxc1Q61572 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Foxc1Q61572 Gm44014-201ENSMUST00000205150 1509 ntBASIC5.74□□□□□ -1.49
Foxc1Q61572 Colec10-201ENSMUST00000036737 4587 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Foxc1Q61572 Gm26656-201ENSMUST00000181825 2972 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Foxc1Q61572 CT010514.1-201ENSMUST00000214088 2969 ntBASIC5.73□□□□□ -1.49
Foxc1Q61572 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Foxc1Q61572 Adam5-202ENSMUST00000118419 2791 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
Foxc1Q61572 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Foxc1Q61572 Vmn2r12-201ENSMUST00000095922 2496 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Foxc1Q61572 9330182O14Rik-202ENSMUST00000228780 2053 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Foxc1Q61572 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Foxc1Q61572 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Foxc1Q61572 Nfkbiz-203ENSMUST00000114457 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Foxc1Q61572 Tbc1d15-201ENSMUST00000020339 3752 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Foxc1Q61572 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Foxc1Q61572 8030451A03Rik-203ENSMUST00000141428 2618 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Foxc1Q61572 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Foxc1Q61572 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Foxc1Q61572 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Foxc1Q61572 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Foxc1Q61572 Lilra5-201ENSMUST00000117550 2109 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Foxc1Q61572 Gm11972-201ENSMUST00000118514 389 ntBASIC5.73□□□□□ -1.49
Foxc1Q61572 Gm13222-201ENSMUST00000119638 138 ntBASIC5.73□□□□□ -1.49
Foxc1Q61572 Lrrc18-203ENSMUST00000120866 1231 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Foxc1Q61572 Gm15840-201ENSMUST00000122099 943 ntBASIC5.73□□□□□ -1.49
Foxc1Q61572 Gm14328-201ENSMUST00000122178 408 ntBASIC5.73□□□□□ -1.49
Foxc1Q61572 Gm25320-201ENSMUST00000122551 324 ntBASIC5.73□□□□□ -1.49
Foxc1Q61572 Cfap100-205ENSMUST00000135757 289 ntTSL 5 BASIC5.73□□□□□ -1.49
Foxc1Q61572 Gm12828-201ENSMUST00000136115 289 ntTSL 3 BASIC5.73□□□□□ -1.49
Foxc1Q61572 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
Foxc1Q61572 Bud31-201ENSMUST00000159018 741 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Foxc1Q61572 Gm17081-201ENSMUST00000167363 478 ntBASIC5.73□□□□□ -1.49
Foxc1Q61572 Aste1-204ENSMUST00000167674 1227 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Foxc1Q61572 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Foxc1Q61572 Gm1979-202ENSMUST00000170224 666 ntTSL 5 BASIC5.73□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms