Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Serpinb8-201ENSMUST00000000514 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim41Q5NCC3 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim41Q5NCC3 Gm22591-201ENSMUST00000104243 106 ntBASIC12.04□□□□□ -0.48
Trim41Q5NCC3 Gm15367-201ENSMUST00000122398 1016 ntBASIC12.04□□□□□ -0.48
Trim41Q5NCC3 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim41Q5NCC3 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC12.04□□□□□ -0.48
Trim41Q5NCC3 Gm6245-201ENSMUST00000164699 768 ntBASIC12.04□□□□□ -0.48
Trim41Q5NCC3 Gm43233-201ENSMUST00000200491 616 ntBASIC12.04□□□□□ -0.48
Trim41Q5NCC3 Gm2774-201ENSMUST00000213650 1165 ntBASIC12.04□□□□□ -0.48
Trim41Q5NCC3 Gm7570-201ENSMUST00000215246 698 ntBASIC12.04□□□□□ -0.48
Trim41Q5NCC3 Gm7252-201ENSMUST00000223284 456 ntBASIC12.04□□□□□ -0.48
Trim41Q5NCC3 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim41Q5NCC3 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trim41Q5NCC3 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC12.04□□□□□ -0.48
Trim41Q5NCC3 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trim41Q5NCC3 Gm44996-201ENSMUST00000208787 2980 ntBASIC12.04□□□□□ -0.48
Trim41Q5NCC3 Odf2l-203ENSMUST00000098539 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim41Q5NCC3 Scn8a-204ENSMUST00000108909 11436 ntTSL 5 BASIC12.04□□□□□ -0.48
Trim41Q5NCC3 Tbc1d24-205ENSMUST00000168378 4350 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim41Q5NCC3 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC12.04□□□□□ -0.48
Trim41Q5NCC3 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim41Q5NCC3 Hook3-201ENSMUST00000037182 12836 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim41Q5NCC3 Ankef1-210ENSMUST00000180246 2726 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trim41Q5NCC3 Klhl23-201ENSMUST00000053087 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim41Q5NCC3 Gm37569-201ENSMUST00000192111 1722 ntBASIC12.03□□□□□ -0.48
Trim41Q5NCC3 9930111J21Rik1-202ENSMUST00000097494 3863 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trim41Q5NCC3 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim41Q5NCC3 Ccdc82-206ENSMUST00000217444 4736 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim41Q5NCC3 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trim41Q5NCC3 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim41Q5NCC3 Gm2986-201ENSMUST00000121603 382 ntBASIC12.03□□□□□ -0.48
Trim41Q5NCC3 Gm11581-201ENSMUST00000122024 763 ntBASIC12.03□□□□□ -0.48
Trim41Q5NCC3 Gm12144-201ENSMUST00000136288 1292 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim41Q5NCC3 Gm25902-201ENSMUST00000158493 318 ntBASIC12.03□□□□□ -0.48
Trim41Q5NCC3 Gm23810-201ENSMUST00000175150 74 ntBASIC12.03□□□□□ -0.48
Trim41Q5NCC3 Gm5116-201ENSMUST00000187732 463 ntBASIC12.03□□□□□ -0.48
Trim41Q5NCC3 Gm29627-201ENSMUST00000187984 463 ntBASIC12.03□□□□□ -0.48
Trim41Q5NCC3 Gm35323-201ENSMUST00000191836 499 ntBASIC12.03□□□□□ -0.48
Trim41Q5NCC3 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim41Q5NCC3 Gm44058-201ENSMUST00000204335 467 ntBASIC12.03□□□□□ -0.48
Trim41Q5NCC3 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Trim41Q5NCC3 AC154558.1-201ENSMUST00000222278 415 ntBASIC12.03□□□□□ -0.48
Trim41Q5NCC3 AC138329.1-201ENSMUST00000225040 471 ntBASIC12.03□□□□□ -0.48
Trim41Q5NCC3 Olfr124-201ENSMUST00000053599 1122 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trim41Q5NCC3 Rybp-ps-201ENSMUST00000069489 681 ntBASIC12.03□□□□□ -0.48
Trim41Q5NCC3 Olfr1181-201ENSMUST00000099823 936 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trim41Q5NCC3 Amy2b-201ENSMUST00000120184 1577 ntBASIC12.03□□□□□ -0.48
Trim41Q5NCC3 Slco6b1-201ENSMUST00000167383 2492 ntTSL 2 BASIC12.03□□□□□ -0.48
Trim41Q5NCC3 Gm4876-203ENSMUST00000139701 2225 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim41Q5NCC3 Cmah-209ENSMUST00000224953 2221 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trim41Q5NCC3 Phactr2-204ENSMUST00000105546 2808 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trim41Q5NCC3 Prkaa1-202ENSMUST00000228218 4618 ntBASIC12.03□□□□□ -0.48
Trim41Q5NCC3 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Trim41Q5NCC3 Gm11853-201ENSMUST00000119687 1384 ntBASIC12.03□□□□□ -0.48
Trim41Q5NCC3 Gm43497-201ENSMUST00000201137 2316 ntBASIC12.03□□□□□ -0.48
Trim41Q5NCC3 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC12.03□□□□□ -0.48
Trim41Q5NCC3 Zbtb6-201ENSMUST00000053098 4535 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim41Q5NCC3 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim41Q5NCC3 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Trim41Q5NCC3 Gm14471-201ENSMUST00000141035 2358 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim41Q5NCC3 Psg26-201ENSMUST00000094798 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim41Q5NCC3 Gatad2b-204ENSMUST00000199607 2418 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Trim41Q5NCC3 Mettl16-205ENSMUST00000141755 12584 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim41Q5NCC3 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC12.02□□□□□ -0.48
Trim41Q5NCC3 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC12.02□□□□□ -0.48
Trim41Q5NCC3 Msn-201ENSMUST00000117399 3842 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim41Q5NCC3 Olfr180-203ENSMUST00000206168 1518 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Trim41Q5NCC3 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC12.02□□□□□ -0.48
Trim41Q5NCC3 Pfkfb1-202ENSMUST00000112713 1872 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Trim41Q5NCC3 Gm9268-202ENSMUST00000173815 2565 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
Trim41Q5NCC3 Olfr727-202ENSMUST00000215317 2616 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Trim41Q5NCC3 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC12.02□□□□□ -0.49
Trim41Q5NCC3 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC12.02□□□□□ -0.49
Trim41Q5NCC3 Gm15266-201ENSMUST00000119635 255 ntBASIC12.02□□□□□ -0.49
Trim41Q5NCC3 M6pr-ps-201ENSMUST00000120481 830 ntBASIC12.02□□□□□ -0.49
Trim41Q5NCC3 Gm6446-201ENSMUST00000120604 818 ntBASIC12.02□□□□□ -0.49
Trim41Q5NCC3 Gm26255-201ENSMUST00000122492 103 ntBASIC12.02□□□□□ -0.49
Trim41Q5NCC3 Olfr405-ps1-202ENSMUST00000127098 711 ntTSL 3 BASIC12.02□□□□□ -0.49
Trim41Q5NCC3 1700095A21Rik-201ENSMUST00000145269 1069 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim41Q5NCC3 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim41Q5NCC3 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim41Q5NCC3 Gm29281-201ENSMUST00000188077 381 ntBASIC12.02□□□□□ -0.49
Trim41Q5NCC3 Gm28846-201ENSMUST00000189161 368 ntBASIC12.02□□□□□ -0.49
Trim41Q5NCC3 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC12.02□□□□□ -0.49
Trim41Q5NCC3 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim41Q5NCC3 Gm44927-201ENSMUST00000207573 716 ntBASIC12.02□□□□□ -0.49
Trim41Q5NCC3 Gm44911-201ENSMUST00000208436 1062 ntBASIC12.02□□□□□ -0.49
Trim41Q5NCC3 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC12.02□□□□□ -0.49
Trim41Q5NCC3 AC151843.1-201ENSMUST00000215960 691 ntBASIC12.02□□□□□ -0.49
Trim41Q5NCC3 Olfr936-202ENSMUST00000216912 937 ntBASIC12.02□□□□□ -0.49
Trim41Q5NCC3 AC166263.1-201ENSMUST00000218586 238 ntBASIC12.02□□□□□ -0.49
Trim41Q5NCC3 Gm4057-201ENSMUST00000221407 368 ntBASIC12.02□□□□□ -0.49
Trim41Q5NCC3 AC117237.1-201ENSMUST00000224035 395 ntBASIC12.02□□□□□ -0.49
Trim41Q5NCC3 AC154834.1-201ENSMUST00000224697 358 ntBASIC12.02□□□□□ -0.49
Trim41Q5NCC3 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim41Q5NCC3 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Trim41Q5NCC3 Vmn1r44-208ENSMUST00000227456 2031 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Trim41Q5NCC3 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim41Q5NCC3 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim41Q5NCC3 Gm37595-201ENSMUST00000192668 1742 ntBASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms