Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC5.52□□□□□ -1.53
Trafd1Q3UDK1 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Trafd1Q3UDK1 Gm43629-201ENSMUST00000201782 704 ntBASIC5.52□□□□□ -1.53
Trafd1Q3UDK1 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Trafd1Q3UDK1 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC5.52□□□□□ -1.53
Trafd1Q3UDK1 Gm19900-201ENSMUST00000207285 576 ntBASIC5.52□□□□□ -1.53
Trafd1Q3UDK1 Cers3-202ENSMUST00000208521 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Trafd1Q3UDK1 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Trafd1Q3UDK1 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC5.52□□□□□ -1.53
Trafd1Q3UDK1 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC5.52□□□□□ -1.53
Trafd1Q3UDK1 AC129597.1-201ENSMUST00000223046 1234 ntBASIC5.52□□□□□ -1.53
Trafd1Q3UDK1 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Trafd1Q3UDK1 Gm5087-204ENSMUST00000225820 645 ntBASIC5.52□□□□□ -1.53
Trafd1Q3UDK1 Gm5830-201ENSMUST00000049117 443 ntBASIC5.52□□□□□ -1.53
Trafd1Q3UDK1 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC5.52□□□□□ -1.53
Trafd1Q3UDK1 Mir143-201ENSMUST00000083511 63 ntBASIC5.52□□□□□ -1.53
Trafd1Q3UDK1 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Trafd1Q3UDK1 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Trafd1Q3UDK1 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Trafd1Q3UDK1 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Trafd1Q3UDK1 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
Trafd1Q3UDK1 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC5.52□□□□□ -1.53
Trafd1Q3UDK1 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Trafd1Q3UDK1 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Trafd1Q3UDK1 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trafd1Q3UDK1 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Trafd1Q3UDK1 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trafd1Q3UDK1 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trafd1Q3UDK1 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Trafd1Q3UDK1 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trafd1Q3UDK1 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Trafd1Q3UDK1 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC5.51□□□□□ -1.53
Trafd1Q3UDK1 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Trafd1Q3UDK1 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trafd1Q3UDK1 Gm15741-201ENSMUST00000119401 754 ntBASIC5.51□□□□□ -1.53
Trafd1Q3UDK1 Gm15331-201ENSMUST00000120225 385 ntBASIC5.51□□□□□ -1.53
Trafd1Q3UDK1 Olfr1069-ps1-201ENSMUST00000120755 965 ntBASIC5.51□□□□□ -1.53
Trafd1Q3UDK1 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC5.51□□□□□ -1.53
Trafd1Q3UDK1 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Trafd1Q3UDK1 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC5.51□□□□□ -1.53
Trafd1Q3UDK1 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC5.51□□□□□ -1.53
Trafd1Q3UDK1 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC5.51□□□□□ -1.53
Trafd1Q3UDK1 Gm10087-201ENSMUST00000167650 330 ntBASIC5.51□□□□□ -1.53
Trafd1Q3UDK1 Gm23806-201ENSMUST00000175157 109 ntBASIC5.51□□□□□ -1.53
Trafd1Q3UDK1 Gm23617-201ENSMUST00000175410 95 ntBASIC5.51□□□□□ -1.53
Trafd1Q3UDK1 Mir3572-201ENSMUST00000175549 86 ntBASIC5.51□□□□□ -1.53
Trafd1Q3UDK1 Gm24303-201ENSMUST00000178237 126 ntBASIC5.51□□□□□ -1.53
Trafd1Q3UDK1 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Trafd1Q3UDK1 Gm38181-201ENSMUST00000181357 720 ntBASIC5.51□□□□□ -1.53
Trafd1Q3UDK1 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC5.51□□□□□ -1.53
Trafd1Q3UDK1 Gm18553-201ENSMUST00000194152 634 ntBASIC5.51□□□□□ -1.53
Trafd1Q3UDK1 Mir6516-201ENSMUST00000196236 110 ntBASIC5.51□□□□□ -1.53
Trafd1Q3UDK1 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
Trafd1Q3UDK1 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trafd1Q3UDK1 AC123067.1-201ENSMUST00000217711 462 ntBASIC5.51□□□□□ -1.53
Trafd1Q3UDK1 Gm9269-201ENSMUST00000221661 578 ntBASIC5.51□□□□□ -1.53
Trafd1Q3UDK1 Olfr779-202ENSMUST00000222301 929 ntAPPRIS P5 BASIC5.51□□□□□ -1.53
Trafd1Q3UDK1 AC165347.1-201ENSMUST00000224089 1025 ntBASIC5.51□□□□□ -1.53
Trafd1Q3UDK1 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC5.51□□□□□ -1.53
Trafd1Q3UDK1 AC154461.5-201ENSMUST00000225429 774 ntBASIC5.51□□□□□ -1.53
Trafd1Q3UDK1 AC161609.1-201ENSMUST00000225878 474 ntBASIC5.51□□□□□ -1.53
Trafd1Q3UDK1 AC154806.5-205ENSMUST00000228828 411 ntBASIC5.51□□□□□ -1.53
Trafd1Q3UDK1 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Trafd1Q3UDK1 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Trafd1Q3UDK1 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trafd1Q3UDK1 Gm37092-201ENSMUST00000193381 1518 ntBASIC5.51□□□□□ -1.53
Trafd1Q3UDK1 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Trafd1Q3UDK1 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trafd1Q3UDK1 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Trafd1Q3UDK1 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Trafd1Q3UDK1 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Trafd1Q3UDK1 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Trafd1Q3UDK1 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC5.5□□□□□ -1.53
Trafd1Q3UDK1 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Trafd1Q3UDK1 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Trafd1Q3UDK1 Gm15182-201ENSMUST00000120832 1676 ntBASIC5.5□□□□□ -1.53
Trafd1Q3UDK1 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Trafd1Q3UDK1 Gm42540-201ENSMUST00000200319 2008 ntBASIC5.5□□□□□ -1.53
Trafd1Q3UDK1 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Trafd1Q3UDK1 Gm44667-201ENSMUST00000207632 3337 ntBASIC5.5□□□□□ -1.53
Trafd1Q3UDK1 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Trafd1Q3UDK1 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Trafd1Q3UDK1 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Trafd1Q3UDK1 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Trafd1Q3UDK1 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Trafd1Q3UDK1 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC5.5□□□□□ -1.53
Trafd1Q3UDK1 Gm8424-201ENSMUST00000117716 988 ntBASIC5.5□□□□□ -1.53
Trafd1Q3UDK1 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Trafd1Q3UDK1 Gm3931-201ENSMUST00000119038 455 ntBASIC5.5□□□□□ -1.53
Trafd1Q3UDK1 Gm14472-201ENSMUST00000119815 282 ntBASIC5.5□□□□□ -1.53
Trafd1Q3UDK1 Gm13506-201ENSMUST00000120391 1083 ntBASIC5.5□□□□□ -1.53
Trafd1Q3UDK1 Gm23883-201ENSMUST00000122686 290 ntBASIC5.5□□□□□ -1.53
Trafd1Q3UDK1 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Trafd1Q3UDK1 Gm16139-201ENSMUST00000160015 420 ntBASIC5.5□□□□□ -1.53
Trafd1Q3UDK1 Vmn1r158-201ENSMUST00000174643 924 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Trafd1Q3UDK1 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC5.5□□□□□ -1.53
Trafd1Q3UDK1 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC5.5□□□□□ -1.53
Trafd1Q3UDK1 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC5.5□□□□□ -1.53
Trafd1Q3UDK1 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC5.5□□□□□ -1.53
Trafd1Q3UDK1 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC5.5□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms