Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Cdx4Q07424 AV026068-210ENSMUST00000189169 877 ntTSL 5 BASIC4.88□□□□□ -1.63
Cdx4Q07424 Gm37177-201ENSMUST00000193768 417 ntBASIC4.88□□□□□ -1.63
Cdx4Q07424 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC4.88□□□□□ -1.63
Cdx4Q07424 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC4.88□□□□□ -1.63
Cdx4Q07424 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC4.88□□□□□ -1.63
Cdx4Q07424 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
Cdx4Q07424 Gm42646-201ENSMUST00000202233 914 ntBASIC4.88□□□□□ -1.63
Cdx4Q07424 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC4.88□□□□□ -1.63
Cdx4Q07424 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Cdx4Q07424 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cdx4Q07424 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC4.88□□□□□ -1.63
Cdx4Q07424 Olfr565-ps1-201ENSMUST00000209824 944 ntBASIC4.88□□□□□ -1.63
Cdx4Q07424 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Cdx4Q07424 Olfr367-ps-203ENSMUST00000213819 541 ntTSL 3 BASIC4.88□□□□□ -1.63
Cdx4Q07424 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC4.88□□□□□ -1.63
Cdx4Q07424 AC153943.1-201ENSMUST00000219312 256 ntBASIC4.88□□□□□ -1.63
Cdx4Q07424 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Cdx4Q07424 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC4.88□□□□□ -1.63
Cdx4Q07424 Gm33312-201ENSMUST00000222443 332 ntBASIC4.88□□□□□ -1.63
Cdx4Q07424 AV026068-220ENSMUST00000224153 1147 ntBASIC4.88□□□□□ -1.63
Cdx4Q07424 4930455B14Rik-204ENSMUST00000224776 848 ntBASIC4.88□□□□□ -1.63
Cdx4Q07424 AC122393.1-201ENSMUST00000226570 319 ntBASIC4.88□□□□□ -1.63
Cdx4Q07424 AC154484.2-201ENSMUST00000228359 818 ntBASIC4.88□□□□□ -1.63
Cdx4Q07424 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Cdx4Q07424 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Cdx4Q07424 Gm21731-201ENSMUST00000079524 489 ntBASIC4.88□□□□□ -1.63
Cdx4Q07424 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Cdx4Q07424 mt-Td-201ENSMUST00000082404 70 ntBASIC4.88□□□□□ -1.63
Cdx4Q07424 Gm24150-201ENSMUST00000082759 104 ntBASIC4.88□□□□□ -1.63
Cdx4Q07424 Mir138-1-201ENSMUST00000083480 99 ntBASIC4.88□□□□□ -1.63
Cdx4Q07424 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Cdx4Q07424 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Cdx4Q07424 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Cdx4Q07424 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Cdx4Q07424 Olfr726-205ENSMUST00000215278 1324 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
Cdx4Q07424 Olfr726-208ENSMUST00000217422 1302 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Cdx4Q07424 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC4.88□□□□□ -1.63
Cdx4Q07424 AC155298.1-201ENSMUST00000225350 3250 ntBASIC4.88□□□□□ -1.63
Cdx4Q07424 Mbd3l2-202ENSMUST00000213777 2116 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cdx4Q07424 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
Cdx4Q07424 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC4.88□□□□□ -1.63
Cdx4Q07424 Obox4-ps27-201ENSMUST00000179203 1362 ntBASIC4.88□□□□□ -1.63
Cdx4Q07424 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cdx4Q07424 AC098728.1-202ENSMUST00000226656 2198 ntBASIC4.88□□□□□ -1.63
Cdx4Q07424 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Cdx4Q07424 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC4.88□□□□□ -1.63
Cdx4Q07424 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC4.88□□□□□ -1.63
Cdx4Q07424 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cdx4Q07424 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Cdx4Q07424 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cdx4Q07424 Fap-209ENSMUST00000174448 2271 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
Cdx4Q07424 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cdx4Q07424 Gm37056-201ENSMUST00000192141 1865 ntBASIC4.88□□□□□ -1.63
Cdx4Q07424 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC4.88□□□□□ -1.63
Cdx4Q07424 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC4.88□□□□□ -1.63
Cdx4Q07424 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cdx4Q07424 Wdr76-201ENSMUST00000028676 2789 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cdx4Q07424 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Cdx4Q07424 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Cdx4Q07424 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Cdx4Q07424 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cdx4Q07424 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Cdx4Q07424 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cdx4Q07424 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Cdx4Q07424 Gm37127-201ENSMUST00000192924 3036 ntBASIC4.87□□□□□ -1.63
Cdx4Q07424 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Cdx4Q07424 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC4.87□□□□□ -1.63
Cdx4Q07424 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Cdx4Q07424 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Cdx4Q07424 Gm37755-201ENSMUST00000195880 2179 ntBASIC4.87□□□□□ -1.63
Cdx4Q07424 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
Cdx4Q07424 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cdx4Q07424 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cdx4Q07424 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cdx4Q07424 AC116950.1-201ENSMUST00000226322 3250 ntBASIC4.87□□□□□ -1.63
Cdx4Q07424 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Cdx4Q07424 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Cdx4Q07424 Gm24272-201ENSMUST00000102329 98 ntBASIC4.87□□□□□ -1.63
Cdx4Q07424 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC4.87□□□□□ -1.63
Cdx4Q07424 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Cdx4Q07424 Gm22195-201ENSMUST00000116861 108 ntBASIC4.87□□□□□ -1.63
Cdx4Q07424 Gm12636-201ENSMUST00000117395 624 ntBASIC4.87□□□□□ -1.63
Cdx4Q07424 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC4.87□□□□□ -1.63
Cdx4Q07424 Gm12985-201ENSMUST00000118376 183 ntBASIC4.87□□□□□ -1.63
Cdx4Q07424 Gm11976-201ENSMUST00000119236 295 ntBASIC4.87□□□□□ -1.63
Cdx4Q07424 Gm15038-201ENSMUST00000122144 296 ntBASIC4.87□□□□□ -1.63
Cdx4Q07424 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC4.87□□□□□ -1.63
Cdx4Q07424 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Cdx4Q07424 Prlr-212ENSMUST00000148257 1190 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Cdx4Q07424 Gm14747-201ENSMUST00000149888 984 ntBASIC4.87□□□□□ -1.63
Cdx4Q07424 Gm22820-201ENSMUST00000157205 329 ntBASIC4.87□□□□□ -1.63
Cdx4Q07424 Gm22186-201ENSMUST00000157822 122 ntBASIC4.87□□□□□ -1.63
Cdx4Q07424 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC4.87□□□□□ -1.63
Cdx4Q07424 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Cdx4Q07424 Gm6650-201ENSMUST00000166710 614 ntBASIC4.87□□□□□ -1.63
Cdx4Q07424 Gm17198-201ENSMUST00000171792 1154 ntBASIC4.87□□□□□ -1.63
Cdx4Q07424 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC4.87□□□□□ -1.63
Cdx4Q07424 Gm21241-201ENSMUST00000179551 934 ntBASIC4.87□□□□□ -1.63
Cdx4Q07424 Gm23186-201ENSMUST00000180078 107 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 156.5 ms