Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm14521-201ENSMUST00000119545 350 ntBASIC6.18□□□□□ -1.42
CiitaP79621 Gm5401-201ENSMUST00000122444 365 ntBASIC6.18□□□□□ -1.42
CiitaP79621 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CiitaP79621 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC6.18□□□□□ -1.42
CiitaP79621 Gm2959-201ENSMUST00000169844 621 ntBASIC6.18□□□□□ -1.42
CiitaP79621 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
CiitaP79621 Gm18969-201ENSMUST00000189423 730 ntBASIC6.18□□□□□ -1.42
CiitaP79621 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
CiitaP79621 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC6.18□□□□□ -1.42
CiitaP79621 Gm38015-201ENSMUST00000193048 188 ntBASIC6.18□□□□□ -1.42
CiitaP79621 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC6.18□□□□□ -1.42
CiitaP79621 Gm43078-201ENSMUST00000197222 168 ntBASIC6.18□□□□□ -1.42
CiitaP79621 Gm43608-201ENSMUST00000197703 687 ntTSL 3 BASIC6.18□□□□□ -1.42
CiitaP79621 Gm8929-201ENSMUST00000197781 1132 ntBASIC6.18□□□□□ -1.42
CiitaP79621 Gm9278-201ENSMUST00000205508 553 ntBASIC6.18□□□□□ -1.42
CiitaP79621 Gm45789-201ENSMUST00000213038 364 ntBASIC6.18□□□□□ -1.42
CiitaP79621 Gm3213-201ENSMUST00000219296 441 ntBASIC6.18□□□□□ -1.42
CiitaP79621 AC154636.1-201ENSMUST00000223226 126 ntBASIC6.18□□□□□ -1.42
CiitaP79621 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC6.18□□□□□ -1.42
CiitaP79621 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC6.18□□□□□ -1.42
CiitaP79621 AC113269.1-201ENSMUST00000227185 674 ntBASIC6.18□□□□□ -1.42
CiitaP79621 CT009600.1-201ENSMUST00000228771 337 ntBASIC6.18□□□□□ -1.42
CiitaP79621 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
CiitaP79621 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CiitaP79621 Olfr594-201ENSMUST00000098205 1087 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
CiitaP79621 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
CiitaP79621 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CiitaP79621 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC6.18□□□□□ -1.42
CiitaP79621 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
CiitaP79621 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CiitaP79621 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
CiitaP79621 Olfr1472-202ENSMUST00000096201 1377 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
CiitaP79621 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
CiitaP79621 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CiitaP79621 AC121870.1-201ENSMUST00000216279 4879 ntBASIC6.17□□□□□ -1.42
CiitaP79621 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CiitaP79621 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
CiitaP79621 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC6.17□□□□□ -1.42
CiitaP79621 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
CiitaP79621 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
CiitaP79621 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC6.17□□□□□ -1.42
CiitaP79621 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC6.17□□□□□ -1.42
CiitaP79621 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
CiitaP79621 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CiitaP79621 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CiitaP79621 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
CiitaP79621 Gm12901-201ENSMUST00000118690 532 ntBASIC6.17□□□□□ -1.42
CiitaP79621 Gm12288-201ENSMUST00000121054 1282 ntBASIC6.17□□□□□ -1.42
CiitaP79621 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CiitaP79621 Gm22226-201ENSMUST00000157355 109 ntBASIC6.17□□□□□ -1.42
CiitaP79621 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
CiitaP79621 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC6.17□□□□□ -1.42
CiitaP79621 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC6.17□□□□□ -1.42
CiitaP79621 Gm28943-201ENSMUST00000186187 615 ntBASIC6.17□□□□□ -1.42
CiitaP79621 Gm28736-201ENSMUST00000186257 615 ntBASIC6.17□□□□□ -1.42
CiitaP79621 Gm29401-201ENSMUST00000186690 615 ntBASIC6.17□□□□□ -1.42
CiitaP79621 Gm29178-204ENSMUST00000186784 615 ntBASIC6.17□□□□□ -1.42
CiitaP79621 Gm28589-201ENSMUST00000186991 615 ntBASIC6.17□□□□□ -1.42
CiitaP79621 Gm28936-201ENSMUST00000187153 615 ntBASIC6.17□□□□□ -1.42
CiitaP79621 Gm29121-201ENSMUST00000187611 615 ntBASIC6.17□□□□□ -1.42
CiitaP79621 Gm28243-201ENSMUST00000187801 615 ntBASIC6.17□□□□□ -1.42
CiitaP79621 Gm28844-202ENSMUST00000187977 615 ntBASIC6.17□□□□□ -1.42
CiitaP79621 Gm29058-201ENSMUST00000189510 615 ntBASIC6.17□□□□□ -1.42
CiitaP79621 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC6.17□□□□□ -1.42
CiitaP79621 Gm29624-201ENSMUST00000190018 615 ntBASIC6.17□□□□□ -1.42
CiitaP79621 Gm28780-201ENSMUST00000190223 615 ntBASIC6.17□□□□□ -1.42
CiitaP79621 Gm8480-201ENSMUST00000190350 698 ntBASIC6.17□□□□□ -1.42
CiitaP79621 Gm28969-211ENSMUST00000190992 615 ntBASIC6.17□□□□□ -1.42
CiitaP79621 Gm28990-207ENSMUST00000191219 615 ntBASIC6.17□□□□□ -1.42
CiitaP79621 Gm36468-201ENSMUST00000192119 615 ntBASIC6.17□□□□□ -1.42
CiitaP79621 Gm37491-201ENSMUST00000192552 1111 ntBASIC6.17□□□□□ -1.42
CiitaP79621 Gm8826-201ENSMUST00000193161 948 ntBASIC6.17□□□□□ -1.42
CiitaP79621 Gm31572-201ENSMUST00000193341 615 ntBASIC6.17□□□□□ -1.42
CiitaP79621 Gm30175-201ENSMUST00000194173 615 ntBASIC6.17□□□□□ -1.42
CiitaP79621 Gm30858-201ENSMUST00000195516 615 ntBASIC6.17□□□□□ -1.42
CiitaP79621 Gm22897-202ENSMUST00000197782 127 ntBASIC6.17□□□□□ -1.42
CiitaP79621 Gm34272-201ENSMUST00000208886 253 ntBASIC6.17□□□□□ -1.42
CiitaP79621 Gm9685-201ENSMUST00000211275 538 ntBASIC6.17□□□□□ -1.42
CiitaP79621 Gm18705-201ENSMUST00000215985 913 ntBASIC6.17□□□□□ -1.42
CiitaP79621 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC6.17□□□□□ -1.42
CiitaP79621 Gm46192-201ENSMUST00000217894 326 ntBASIC6.17□□□□□ -1.42
CiitaP79621 AC147615.1-201ENSMUST00000218914 441 ntBASIC6.17□□□□□ -1.42
CiitaP79621 Gm18409-202ENSMUST00000220105 529 ntBASIC6.17□□□□□ -1.42
CiitaP79621 AC118230.1-201ENSMUST00000220196 656 ntBASIC6.17□□□□□ -1.42
CiitaP79621 Gm9269-201ENSMUST00000221661 578 ntBASIC6.17□□□□□ -1.42
CiitaP79621 AC123665.4-201ENSMUST00000228790 249 ntBASIC6.17□□□□□ -1.42
CiitaP79621 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CiitaP79621 Olfr1444-201ENSMUST00000059675 1129 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
CiitaP79621 Rybp-ps-201ENSMUST00000069489 681 ntBASIC6.17□□□□□ -1.42
CiitaP79621 Olfr192-201ENSMUST00000080251 925 ntBASIC6.17□□□□□ -1.42
CiitaP79621 Gm22807-201ENSMUST00000082737 129 ntBASIC6.17□□□□□ -1.42
CiitaP79621 Gm26163-201ENSMUST00000083792 178 ntBASIC6.17□□□□□ -1.42
CiitaP79621 Olfr1135-201ENSMUST00000099853 933 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
CiitaP79621 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CiitaP79621 AC156031.1-201ENSMUST00000217288 2555 ntBASIC6.17□□□□□ -1.42
CiitaP79621 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
CiitaP79621 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC6.17□□□□□ -1.42
CiitaP79621 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CiitaP79621 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CiitaP79621 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms