Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm29605-201ENSMUST00000190800 292 ntBASIC7.64□□□□□ -1.19
Rfx1P48377 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC7.64□□□□□ -1.19
Rfx1P48377 Gm20940-201ENSMUST00000197308 360 ntBASIC7.64□□□□□ -1.19
Rfx1P48377 Gm8182-201ENSMUST00000197863 769 ntBASIC7.64□□□□□ -1.19
Rfx1P48377 Gm9057-201ENSMUST00000198791 296 ntBASIC7.64□□□□□ -1.19
Rfx1P48377 Gm43122-201ENSMUST00000201752 354 ntTSL 3 BASIC7.64□□□□□ -1.19
Rfx1P48377 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC7.64□□□□□ -1.19
Rfx1P48377 AC154558.1-201ENSMUST00000222278 415 ntBASIC7.64□□□□□ -1.19
Rfx1P48377 4932702P03Rik-203ENSMUST00000225028 670 ntBASIC7.64□□□□□ -1.19
Rfx1P48377 Olfr124-201ENSMUST00000053599 1122 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Rfx1P48377 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Rfx1P48377 Gm25404-201ENSMUST00000082970 107 ntBASIC7.64□□□□□ -1.19
Rfx1P48377 Mir196a-1-201ENSMUST00000083612 102 ntBASIC7.64□□□□□ -1.19
Rfx1P48377 Olfr1051-201ENSMUST00000099898 927 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Rfx1P48377 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Rfx1P48377 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Rfx1P48377 Adh7-201ENSMUST00000090171 3432 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Rfx1P48377 Nav3-201ENSMUST00000032719 9962 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Rfx1P48377 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Rfx1P48377 Gm10475-201ENSMUST00000084713 1796 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Rfx1P48377 AC124446.1-201ENSMUST00000221027 2644 ntBASIC7.64□□□□□ -1.19
Rfx1P48377 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Rfx1P48377 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC7.63□□□□□ -1.19
Rfx1P48377 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Rfx1P48377 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Rfx1P48377 Gm18701-201ENSMUST00000188281 1536 ntBASIC7.63□□□□□ -1.19
Rfx1P48377 Rnase4-201ENSMUST00000022428 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Rfx1P48377 Atp10b-201ENSMUST00000077659 6825 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Rfx1P48377 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Rfx1P48377 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC7.63□□□□□ -1.19
Rfx1P48377 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
Rfx1P48377 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
Rfx1P48377 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
Rfx1P48377 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Rfx1P48377 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
Rfx1P48377 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
Rfx1P48377 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Rfx1P48377 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Rfx1P48377 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Rfx1P48377 Serpina3h-202ENSMUST00000116393 1226 ntBASIC7.63□□□□□ -1.19
Rfx1P48377 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC7.63□□□□□ -1.19
Rfx1P48377 Gm15923-201ENSMUST00000119300 1169 ntBASIC7.63□□□□□ -1.19
Rfx1P48377 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC7.63□□□□□ -1.19
Rfx1P48377 Gm15038-201ENSMUST00000122144 296 ntBASIC7.63□□□□□ -1.19
Rfx1P48377 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC7.63□□□□□ -1.19
Rfx1P48377 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC7.63□□□□□ -1.19
Rfx1P48377 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Rfx1P48377 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Rfx1P48377 Gm9587-201ENSMUST00000172449 454 ntBASIC7.63□□□□□ -1.19
Rfx1P48377 1110038B12Rik-201ENSMUST00000172501 579 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Rfx1P48377 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC7.63□□□□□ -1.19
Rfx1P48377 Mir5100-201ENSMUST00000174993 64 ntBASIC7.63□□□□□ -1.19
Rfx1P48377 Gm22569-201ENSMUST00000175545 124 ntBASIC7.63□□□□□ -1.19
Rfx1P48377 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Rfx1P48377 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Rfx1P48377 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Rfx1P48377 Mir7669-201ENSMUST00000183442 58 ntBASIC7.63□□□□□ -1.19
Rfx1P48377 Mir6411-201ENSMUST00000183556 108 ntBASIC7.63□□□□□ -1.19
Rfx1P48377 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC7.63□□□□□ -1.19
Rfx1P48377 Gm9114-201ENSMUST00000188558 997 ntBASIC7.63□□□□□ -1.19
Rfx1P48377 Gm18181-201ENSMUST00000190670 736 ntBASIC7.63□□□□□ -1.19
Rfx1P48377 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC7.63□□□□□ -1.19
Rfx1P48377 Gm37758-201ENSMUST00000194275 629 ntBASIC7.63□□□□□ -1.19
Rfx1P48377 Gm20690-202ENSMUST00000195126 355 ntBASIC7.63□□□□□ -1.19
Rfx1P48377 Ighv8-15-201ENSMUST00000197770 294 ntBASIC7.63□□□□□ -1.19
Rfx1P48377 Gm9173-201ENSMUST00000198054 400 ntBASIC7.63□□□□□ -1.19
Rfx1P48377 Gm44449-201ENSMUST00000203610 153 ntBASIC7.63□□□□□ -1.19
Rfx1P48377 Gm44940-201ENSMUST00000206225 1247 ntBASIC7.63□□□□□ -1.19
Rfx1P48377 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC7.63□□□□□ -1.19
Rfx1P48377 Gm18559-201ENSMUST00000208249 604 ntBASIC7.63□□□□□ -1.19
Rfx1P48377 Gm5338-201ENSMUST00000209530 639 ntBASIC7.63□□□□□ -1.19
Rfx1P48377 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Rfx1P48377 CU024910.1-201ENSMUST00000214310 418 ntBASIC7.63□□□□□ -1.19
Rfx1P48377 AC102582.1-201ENSMUST00000215376 378 ntBASIC7.63□□□□□ -1.19
Rfx1P48377 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Rfx1P48377 AC122539.1-201ENSMUST00000219925 329 ntBASIC7.63□□□□□ -1.19
Rfx1P48377 Gm45965-201ENSMUST00000221192 1284 ntBASIC7.63□□□□□ -1.19
Rfx1P48377 Gm4263-202ENSMUST00000221392 667 ntBASIC7.63□□□□□ -1.19
Rfx1P48377 AC154257.2-201ENSMUST00000224166 340 ntBASIC7.63□□□□□ -1.19
Rfx1P48377 AC131085.1-201ENSMUST00000224746 656 ntBASIC7.63□□□□□ -1.19
Rfx1P48377 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Rfx1P48377 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Rfx1P48377 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Rfx1P48377 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC7.63□□□□□ -1.19
Rfx1P48377 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Rfx1P48377 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Rfx1P48377 AC098728.1-202ENSMUST00000226656 2198 ntBASIC7.63□□□□□ -1.19
Rfx1P48377 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Rfx1P48377 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Rfx1P48377 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Rfx1P48377 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC7.62□□□□□ -1.19
Rfx1P48377 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Rfx1P48377 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Rfx1P48377 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Rfx1P48377 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Rfx1P48377 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Rfx1P48377 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Rfx1P48377 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Rfx1P48377 Gm24935-201ENSMUST00000103770 110 ntBASIC7.62□□□□□ -1.19
Rfx1P48377 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC7.62□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 95.4 ms