Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Cdx2P43241 AC159244.3-201ENSMUST00000222887 3153 ntBASIC5.37□□□□□ -1.55
Cdx2P43241 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Cdx2P43241 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Cdx2P43241 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
Cdx2P43241 Olfr510-202ENSMUST00000213979 2898 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Cdx2P43241 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC5.36□□□□□ -1.55
Cdx2P43241 Gm11975-201ENSMUST00000118772 481 ntBASIC5.36□□□□□ -1.55
Cdx2P43241 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC5.36□□□□□ -1.55
Cdx2P43241 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC5.36□□□□□ -1.55
Cdx2P43241 Gm15691-201ENSMUST00000138626 849 ntTSL 3 BASIC5.36□□□□□ -1.55
Cdx2P43241 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC5.36□□□□□ -1.55
Cdx2P43241 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Cdx2P43241 Gm5946-201ENSMUST00000182340 970 ntBASIC5.36□□□□□ -1.55
Cdx2P43241 Gm28385-201ENSMUST00000185671 292 ntBASIC5.36□□□□□ -1.55
Cdx2P43241 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC5.36□□□□□ -1.55
Cdx2P43241 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC5.36□□□□□ -1.55
Cdx2P43241 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC5.36□□□□□ -1.55
Cdx2P43241 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Cdx2P43241 Gm37560-201ENSMUST00000194289 1000 ntBASIC5.36□□□□□ -1.55
Cdx2P43241 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Cdx2P43241 Gm43175-201ENSMUST00000198450 3810 ntBASIC5.36□□□□□ -1.55
Cdx2P43241 Gm6070-201ENSMUST00000207275 419 ntBASIC5.36□□□□□ -1.55
Cdx2P43241 Lrrc72-201ENSMUST00000020853 660 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Cdx2P43241 AC159886.1-201ENSMUST00000217099 1091 ntBASIC5.36□□□□□ -1.55
Cdx2P43241 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Cdx2P43241 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC5.36□□□□□ -1.55
Cdx2P43241 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC5.36□□□□□ -1.55
Cdx2P43241 AC154436.2-201ENSMUST00000227408 208 ntBASIC5.36□□□□□ -1.55
Cdx2P43241 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Cdx2P43241 Ube2dnl1-201ENSMUST00000059509 743 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Cdx2P43241 Tas2r129-201ENSMUST00000070991 965 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Cdx2P43241 Olfr732-201ENSMUST00000071208 1044 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Cdx2P43241 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC5.36□□□□□ -1.55
Cdx2P43241 Cldn34b3-201ENSMUST00000096389 1077 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Cdx2P43241 Gm10540-201ENSMUST00000097581 276 ntBASIC5.36□□□□□ -1.55
Cdx2P43241 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Cdx2P43241 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Cdx2P43241 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Cdx2P43241 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Cdx2P43241 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Cdx2P43241 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Cdx2P43241 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Cdx2P43241 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Cdx2P43241 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Cdx2P43241 Gm18066-201ENSMUST00000210904 1774 ntBASIC5.36□□□□□ -1.55
Cdx2P43241 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC5.36□□□□□ -1.55
Cdx2P43241 Gm42513-201ENSMUST00000197831 2119 ntBASIC5.36□□□□□ -1.55
Cdx2P43241 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC5.36□□□□□ -1.55
Cdx2P43241 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC5.36□□□□□ -1.55
Cdx2P43241 Gm44235-201ENSMUST00000204312 3058 ntBASIC5.36□□□□□ -1.55
Cdx2P43241 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Cdx2P43241 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Cdx2P43241 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Cdx2P43241 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
Cdx2P43241 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Cdx2P43241 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC5.35□□□□□ -1.55
Cdx2P43241 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
Cdx2P43241 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Cdx2P43241 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
Cdx2P43241 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Cdx2P43241 Gm14886-201ENSMUST00000117208 2629 ntBASIC5.35□□□□□ -1.55
Cdx2P43241 LOC102637012-201ENSMUST00000217248 2562 ntBASIC5.35□□□□□ -1.55
Cdx2P43241 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
Cdx2P43241 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC5.35□□□□□ -1.55
Cdx2P43241 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Cdx2P43241 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Cdx2P43241 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Cdx2P43241 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC5.35□□□□□ -1.55
Cdx2P43241 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Cdx2P43241 Gm15560-201ENSMUST00000117107 643 ntBASIC5.35□□□□□ -1.55
Cdx2P43241 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Cdx2P43241 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Cdx2P43241 Gm22411-201ENSMUST00000175462 126 ntBASIC5.35□□□□□ -1.55
Cdx2P43241 Gm22002-201ENSMUST00000175622 125 ntBASIC5.35□□□□□ -1.55
Cdx2P43241 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC5.35□□□□□ -1.55
Cdx2P43241 Gm9499-201ENSMUST00000180888 964 ntBASIC5.35□□□□□ -1.55
Cdx2P43241 Gm27541-201ENSMUST00000184078 122 ntBASIC5.35□□□□□ -1.55
Cdx2P43241 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC5.35□□□□□ -1.55
Cdx2P43241 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC5.35□□□□□ -1.55
Cdx2P43241 Gm43467-201ENSMUST00000197441 437 ntBASIC5.35□□□□□ -1.55
Cdx2P43241 Gm44604-201ENSMUST00000205475 496 ntBASIC5.35□□□□□ -1.55
Cdx2P43241 Gm44580-201ENSMUST00000206333 877 ntBASIC5.35□□□□□ -1.55
Cdx2P43241 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Cdx2P43241 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC5.35□□□□□ -1.55
Cdx2P43241 Gm31063-201ENSMUST00000222636 580 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Cdx2P43241 Gm40598-201ENSMUST00000222953 547 ntBASIC5.35□□□□□ -1.55
Cdx2P43241 CT030182.2-201ENSMUST00000223569 620 ntBASIC5.35□□□□□ -1.55
Cdx2P43241 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Cdx2P43241 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Cdx2P43241 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Cdx2P43241 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Cdx2P43241 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Cdx2P43241 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
Cdx2P43241 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC5.35□□□□□ -1.55
Cdx2P43241 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Cdx2P43241 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Cdx2P43241 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Cdx2P43241 AC132852.1-201ENSMUST00000214683 2324 ntBASIC5.35□□□□□ -1.55
Cdx2P43241 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC5.35□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 102 ms