Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
HttP42859 Gria1-202ENSMUST00000094179 5399 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
HttP42859 Gm10727-201ENSMUST00000197107 1602 ntBASIC5.61□□□□□ -1.51
HttP42859 Ptpn21-201ENSMUST00000085116 5696 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HttP42859 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
HttP42859 Fmn1-203ENSMUST00000102547 4967 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
HttP42859 Col4a4-201ENSMUST00000087050 10108 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HttP42859 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
HttP42859 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
HttP42859 2410089E03Rik-201ENSMUST00000110617 10469 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
HttP42859 AC159244.3-201ENSMUST00000222887 3153 ntBASIC5.6□□□□□ -1.51
HttP42859 Zfp27-201ENSMUST00000053521 3150 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HttP42859 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HttP42859 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC5.6□□□□□ -1.51
HttP42859 AC139758.3-201ENSMUST00000226853 2704 ntBASIC5.6□□□□□ -1.51
HttP42859 AC131586.2-202ENSMUST00000227016 2705 ntBASIC5.6□□□□□ -1.51
HttP42859 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HttP42859 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HttP42859 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC5.6□□□□□ -1.51
HttP42859 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC5.6□□□□□ -1.51
HttP42859 Gm43370-201ENSMUST00000196437 284 ntBASIC5.6□□□□□ -1.51
HttP42859 AC125405.1-201ENSMUST00000226406 589 ntBASIC5.6□□□□□ -1.51
HttP42859 Gm36947-201ENSMUST00000194709 2249 ntBASIC5.6□□□□□ -1.51
HttP42859 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
HttP42859 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HttP42859 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HttP42859 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
HttP42859 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HttP42859 Olfr1214-203ENSMUST00000217469 1955 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
HttP42859 Cracr2a-203ENSMUST00000212051 7625 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
HttP42859 Osbpl6-201ENSMUST00000077972 8037 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HttP42859 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HttP42859 AC190403.1-201ENSMUST00000224515 1325 ntBASIC5.6□□□□□ -1.51
HttP42859 Gm13214-201ENSMUST00000122137 408 ntBASIC5.6□□□□□ -1.51
HttP42859 Vwa3a-201ENSMUST00000033180 4575 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
HttP42859 Plec-208ENSMUST00000080857 14959 ntTSL 5 BASIC5.6□□□□□ -1.51
HttP42859 Olfr126-202ENSMUST00000213844 1958 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
HttP42859 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC5.6□□□□□ -1.51
HttP42859 Gm37356-201ENSMUST00000193362 1613 ntBASIC5.6□□□□□ -1.51
HttP42859 Setd5-202ENSMUST00000113155 6362 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HttP42859 Gm23178-201ENSMUST00000116782 95 ntBASIC5.59□□□□□ -1.51
HttP42859 Gm5473-201ENSMUST00000179326 642 ntBASIC5.59□□□□□ -1.51
HttP42859 Gm9443-201ENSMUST00000188406 816 ntBASIC5.59□□□□□ -1.51
HttP42859 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC5.59□□□□□ -1.51
HttP42859 Gm44134-202ENSMUST00000204777 545 ntBASIC5.59□□□□□ -1.51
HttP42859 AC113269.1-201ENSMUST00000227185 674 ntBASIC5.59□□□□□ -1.51
HttP42859 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HttP42859 AC141476.1-201ENSMUST00000224988 3387 ntBASIC5.59□□□□□ -1.51
HttP42859 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC5.59□□□□□ -1.51
HttP42859 Zbtb6-201ENSMUST00000053098 4535 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HttP42859 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HttP42859 Dusp16-201ENSMUST00000100857 5104 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
HttP42859 Naip1-201ENSMUST00000022142 5464 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HttP42859 Plec-209ENSMUST00000089610 14972 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
HttP42859 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HttP42859 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
HttP42859 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HttP42859 AC114585.1-201ENSMUST00000228080 3680 ntBASIC5.59□□□□□ -1.51
HttP42859 Blm-202ENSMUST00000170315 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
HttP42859 Gm15779-201ENSMUST00000117470 412 ntBASIC5.59□□□□□ -1.51
HttP42859 Gm14878-201ENSMUST00000118167 293 ntBASIC5.59□□□□□ -1.51
HttP42859 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC5.59□□□□□ -1.51
HttP42859 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC5.59□□□□□ -1.51
HttP42859 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC5.59□□□□□ -1.51
HttP42859 AC154305.3-201ENSMUST00000224661 552 ntBASIC5.59□□□□□ -1.51
HttP42859 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HttP42859 Kif1a-204ENSMUST00000171796 8206 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HttP42859 Dsc3-201ENSMUST00000115848 5333 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
HttP42859 CT009480.2-201ENSMUST00000225152 3369 ntBASIC5.59□□□□□ -1.51
HttP42859 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
HttP42859 Pfkfb3-214ENSMUST00000179584 4756 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
HttP42859 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
HttP42859 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC5.59□□□□□ -1.52
HttP42859 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
HttP42859 Gm17081-201ENSMUST00000167363 478 ntBASIC5.59□□□□□ -1.52
HttP42859 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC5.59□□□□□ -1.52
HttP42859 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC5.59□□□□□ -1.52
HttP42859 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC5.59□□□□□ -1.52
HttP42859 AC120011.1-201ENSMUST00000202147 744 ntBASIC5.59□□□□□ -1.52
HttP42859 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC5.59□□□□□ -1.52
HttP42859 Gm8189-203ENSMUST00000211159 1225 ntBASIC5.59□□□□□ -1.52
HttP42859 n-R5s27-201ENSMUST00000093699 119 ntBASIC5.59□□□□□ -1.52
HttP42859 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC5.59□□□□□ -1.52
HttP42859 AC163731.1-201ENSMUST00000225696 3118 ntBASIC5.58□□□□□ -1.52
HttP42859 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
HttP42859 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
HttP42859 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HttP42859 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC5.58□□□□□ -1.52
HttP42859 Gprasp1-202ENSMUST00000113145 5640 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HttP42859 Gm43784-201ENSMUST00000202922 2436 ntBASIC5.58□□□□□ -1.52
HttP42859 Gm23481-201ENSMUST00000104173 131 ntBASIC5.58□□□□□ -1.52
HttP42859 2010013B24Rik-201ENSMUST00000126922 747 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HttP42859 Mir1945-201ENSMUST00000157919 78 ntBASIC5.58□□□□□ -1.52
HttP42859 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC5.58□□□□□ -1.52
HttP42859 AC154239.1-201ENSMUST00000228565 406 ntBASIC5.58□□□□□ -1.52
HttP42859 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC5.58□□□□□ -1.52
HttP42859 Atp2b4-203ENSMUST00000125659 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
HttP42859 Gm45290-201ENSMUST00000211177 3890 ntBASIC5.58□□□□□ -1.52
HttP42859 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC5.58□□□□□ -1.52
HttP42859 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC5.58□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms