Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Traf1P39428 Gm5066-201ENSMUST00000188479 822 ntBASIC6.64□□□□□ -1.35
Traf1P39428 Gm28883-201ENSMUST00000189256 369 ntBASIC6.64□□□□□ -1.35
Traf1P39428 Gm28188-201ENSMUST00000190483 236 ntBASIC6.64□□□□□ -1.35
Traf1P39428 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC6.64□□□□□ -1.35
Traf1P39428 Gm18698-201ENSMUST00000192327 668 ntBASIC6.64□□□□□ -1.35
Traf1P39428 Gm37681-201ENSMUST00000193880 727 ntBASIC6.64□□□□□ -1.35
Traf1P39428 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC6.64□□□□□ -1.35
Traf1P39428 Gm43467-201ENSMUST00000197441 437 ntBASIC6.64□□□□□ -1.35
Traf1P39428 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC6.64□□□□□ -1.35
Traf1P39428 Gm29736-201ENSMUST00000198189 385 ntBASIC6.64□□□□□ -1.35
Traf1P39428 Gm43895-201ENSMUST00000203219 855 ntBASIC6.64□□□□□ -1.35
Traf1P39428 Gm45082-201ENSMUST00000206082 601 ntBASIC6.64□□□□□ -1.35
Traf1P39428 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC6.64□□□□□ -1.35
Traf1P39428 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Traf1P39428 Gm9269-201ENSMUST00000221661 578 ntBASIC6.64□□□□□ -1.35
Traf1P39428 CT025523.1-201ENSMUST00000228318 694 ntBASIC6.64□□□□□ -1.35
Traf1P39428 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Traf1P39428 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
Traf1P39428 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Traf1P39428 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Traf1P39428 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC6.64□□□□□ -1.35
Traf1P39428 Mir133b-201ENSMUST00000083546 119 ntBASIC6.64□□□□□ -1.35
Traf1P39428 Olfr916-202ENSMUST00000213714 1380 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Traf1P39428 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Traf1P39428 Gm37959-201ENSMUST00000191700 2897 ntBASIC6.64□□□□□ -1.35
Traf1P39428 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC6.64□□□□□ -1.35
Traf1P39428 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC6.64□□□□□ -1.35
Traf1P39428 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Traf1P39428 Gm44144-201ENSMUST00000203683 1960 ntBASIC6.64□□□□□ -1.35
Traf1P39428 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Traf1P39428 Gm43788-201ENSMUST00000201539 2417 ntBASIC6.64□□□□□ -1.35
Traf1P39428 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC6.64□□□□□ -1.35
Traf1P39428 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Traf1P39428 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Traf1P39428 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Traf1P39428 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Traf1P39428 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Traf1P39428 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Traf1P39428 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Traf1P39428 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Traf1P39428 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC6.63□□□□□ -1.35
Traf1P39428 Gm23910-201ENSMUST00000104597 132 ntBASIC6.63□□□□□ -1.35
Traf1P39428 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Traf1P39428 Gm3943-201ENSMUST00000118606 718 ntBASIC6.63□□□□□ -1.35
Traf1P39428 Gm4989-201ENSMUST00000118711 749 ntBASIC6.63□□□□□ -1.35
Traf1P39428 Gm2199-201ENSMUST00000119065 874 ntBASIC6.63□□□□□ -1.35
Traf1P39428 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Traf1P39428 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC6.63□□□□□ -1.35
Traf1P39428 Gm20453-201ENSMUST00000173968 226 ntBASIC6.63□□□□□ -1.35
Traf1P39428 Gm22650-201ENSMUST00000175138 105 ntBASIC6.63□□□□□ -1.35
Traf1P39428 Gm22254-201ENSMUST00000179186 110 ntBASIC6.63□□□□□ -1.35
Traf1P39428 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Traf1P39428 Gm29159-201ENSMUST00000187969 379 ntBASIC6.63□□□□□ -1.35
Traf1P39428 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC6.63□□□□□ -1.35
Traf1P39428 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Traf1P39428 Gm38029-201ENSMUST00000192669 2090 ntBASIC6.63□□□□□ -1.35
Traf1P39428 Gm37480-201ENSMUST00000194795 550 ntTSL 5 BASIC6.63□□□□□ -1.35
Traf1P39428 Gm43054-201ENSMUST00000199495 884 ntBASIC6.63□□□□□ -1.35
Traf1P39428 AC142113.2-201ENSMUST00000217425 748 ntBASIC6.63□□□□□ -1.35
Traf1P39428 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC6.63□□□□□ -1.35
Traf1P39428 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC6.63□□□□□ -1.35
Traf1P39428 AC158779.2-201ENSMUST00000227902 1947 ntBASIC6.63□□□□□ -1.35
Traf1P39428 AC152394.2-202ENSMUST00000228503 1064 ntBASIC6.63□□□□□ -1.35
Traf1P39428 AC123665.6-201ENSMUST00000228568 538 ntBASIC6.63□□□□□ -1.35
Traf1P39428 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
Traf1P39428 Olfr799-201ENSMUST00000071126 936 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Traf1P39428 Mir7-2-201ENSMUST00000083675 97 ntBASIC6.63□□□□□ -1.35
Traf1P39428 Gm43169-201ENSMUST00000199544 4734 ntBASIC6.63□□□□□ -1.35
Traf1P39428 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC6.62□□□□□ -1.35
Traf1P39428 Olfr1173-201ENSMUST00000099830 2268 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Traf1P39428 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC6.62□□□□□ -1.35
Traf1P39428 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Traf1P39428 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC6.62□□□□□ -1.35
Traf1P39428 Gm45632-201ENSMUST00000211532 1888 ntBASIC6.62□□□□□ -1.35
Traf1P39428 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC6.62□□□□□ -1.35
Traf1P39428 Gm37087-201ENSMUST00000192966 3309 ntBASIC6.62□□□□□ -1.35
Traf1P39428 Gm37752-201ENSMUST00000193494 3309 ntBASIC6.62□□□□□ -1.35
Traf1P39428 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC6.62□□□□□ -1.35
Traf1P39428 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Traf1P39428 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC6.62□□□□□ -1.35
Traf1P39428 Gm24265-201ENSMUST00000101833 141 ntBASIC6.62□□□□□ -1.35
Traf1P39428 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Traf1P39428 Gm22592-201ENSMUST00000104242 131 ntBASIC6.62□□□□□ -1.35
Traf1P39428 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC6.62□□□□□ -1.35
Traf1P39428 Gm13866-201ENSMUST00000118901 968 ntBASIC6.62□□□□□ -1.35
Traf1P39428 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC6.62□□□□□ -1.35
Traf1P39428 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC6.62□□□□□ -1.35
Traf1P39428 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC6.62□□□□□ -1.35
Traf1P39428 Gm8061-201ENSMUST00000122380 350 ntBASIC6.62□□□□□ -1.35
Traf1P39428 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC6.62□□□□□ -1.35
Traf1P39428 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Traf1P39428 Gm22122-201ENSMUST00000175147 200 ntBASIC6.62□□□□□ -1.35
Traf1P39428 Gm24407-201ENSMUST00000177864 141 ntBASIC6.62□□□□□ -1.35
Traf1P39428 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC6.62□□□□□ -1.35
Traf1P39428 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC6.62□□□□□ -1.35
Traf1P39428 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC6.62□□□□□ -1.35
Traf1P39428 Stk-ps2-204ENSMUST00000187808 616 ntBASIC6.62□□□□□ -1.35
Traf1P39428 Gm29376-201ENSMUST00000189357 835 ntBASIC6.62□□□□□ -1.35
Traf1P39428 Gm29467-202ENSMUST00000189669 935 ntTSL 5 BASIC6.62□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms