Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC5.34□□□□□ -1.55
Sftpa1P35242 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC5.34□□□□□ -1.55
Sftpa1P35242 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC5.34□□□□□ -1.55
Sftpa1P35242 Gm37932-201ENSMUST00000192258 1167 ntBASIC5.34□□□□□ -1.55
Sftpa1P35242 Gm43078-201ENSMUST00000197222 168 ntBASIC5.34□□□□□ -1.55
Sftpa1P35242 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Sftpa1P35242 Gm42646-201ENSMUST00000202233 914 ntBASIC5.34□□□□□ -1.55
Sftpa1P35242 Gm20946-201ENSMUST00000212367 461 ntBASIC5.34□□□□□ -1.55
Sftpa1P35242 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC5.34□□□□□ -1.55
Sftpa1P35242 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC5.34□□□□□ -1.55
Sftpa1P35242 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC5.34□□□□□ -1.55
Sftpa1P35242 CT030184.2-201ENSMUST00000223064 263 ntBASIC5.34□□□□□ -1.55
Sftpa1P35242 Mir30b-201ENSMUST00000083542 96 ntBASIC5.34□□□□□ -1.55
Sftpa1P35242 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC5.34□□□□□ -1.55
Sftpa1P35242 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
Sftpa1P35242 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
Sftpa1P35242 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC5.34□□□□□ -1.56
Sftpa1P35242 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
Sftpa1P35242 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC5.34□□□□□ -1.56
Sftpa1P35242 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.56
Sftpa1P35242 Gm13854-201ENSMUST00000121183 1679 ntBASIC5.34□□□□□ -1.56
Sftpa1P35242 Gm38198-201ENSMUST00000191772 3581 ntBASIC5.34□□□□□ -1.56
Sftpa1P35242 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
Sftpa1P35242 AC164567.3-201ENSMUST00000217743 2869 ntBASIC5.34□□□□□ -1.56
Sftpa1P35242 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sftpa1P35242 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sftpa1P35242 AC154841.1-201ENSMUST00000227263 1479 ntBASIC5.33□□□□□ -1.56
Sftpa1P35242 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sftpa1P35242 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC5.33□□□□□ -1.56
Sftpa1P35242 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Sftpa1P35242 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC5.33□□□□□ -1.56
Sftpa1P35242 Gm43842-201ENSMUST00000202890 2982 ntBASIC5.33□□□□□ -1.56
Sftpa1P35242 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
Sftpa1P35242 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
Sftpa1P35242 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Sftpa1P35242 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Sftpa1P35242 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Sftpa1P35242 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sftpa1P35242 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC5.33□□□□□ -1.56
Sftpa1P35242 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sftpa1P35242 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC5.33□□□□□ -1.56
Sftpa1P35242 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC5.33□□□□□ -1.56
Sftpa1P35242 Gm25383-201ENSMUST00000157810 144 ntBASIC5.33□□□□□ -1.56
Sftpa1P35242 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Sftpa1P35242 Gm25534-201ENSMUST00000175365 125 ntBASIC5.33□□□□□ -1.56
Sftpa1P35242 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC5.33□□□□□ -1.56
Sftpa1P35242 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Sftpa1P35242 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Sftpa1P35242 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC5.33□□□□□ -1.56
Sftpa1P35242 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sftpa1P35242 Gm37631-201ENSMUST00000192275 364 ntBASIC5.33□□□□□ -1.56
Sftpa1P35242 Gm19002-201ENSMUST00000192649 1012 ntBASIC5.33□□□□□ -1.56
Sftpa1P35242 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC5.33□□□□□ -1.56
Sftpa1P35242 Gm43371-201ENSMUST00000202838 1031 ntBASIC5.33□□□□□ -1.56
Sftpa1P35242 Api5-ps-201ENSMUST00000206607 577 ntBASIC5.33□□□□□ -1.56
Sftpa1P35242 Gm18904-201ENSMUST00000218756 329 ntBASIC5.33□□□□□ -1.56
Sftpa1P35242 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
Sftpa1P35242 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Sftpa1P35242 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Sftpa1P35242 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Sftpa1P35242 Mir27a-201ENSMUST00000083510 87 ntBASIC5.33□□□□□ -1.56
Sftpa1P35242 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Sftpa1P35242 Olfr380-202ENSMUST00000121209 1669 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
Sftpa1P35242 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sftpa1P35242 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Sftpa1P35242 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Sftpa1P35242 Gm44220-201ENSMUST00000203784 2487 ntBASIC5.33□□□□□ -1.56
Sftpa1P35242 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Sftpa1P35242 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sftpa1P35242 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Sftpa1P35242 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sftpa1P35242 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Sftpa1P35242 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC5.32□□□□□ -1.56
Sftpa1P35242 Gm37114-201ENSMUST00000195065 1804 ntBASIC5.32□□□□□ -1.56
Sftpa1P35242 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Sftpa1P35242 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Sftpa1P35242 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC5.32□□□□□ -1.56
Sftpa1P35242 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
Sftpa1P35242 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC5.32□□□□□ -1.56
Sftpa1P35242 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Sftpa1P35242 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Sftpa1P35242 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Sftpa1P35242 Gm22272-201ENSMUST00000104039 134 ntBASIC5.32□□□□□ -1.56
Sftpa1P35242 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Sftpa1P35242 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Sftpa1P35242 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC5.32□□□□□ -1.56
Sftpa1P35242 Mir7056-201ENSMUST00000183776 59 ntBASIC5.32□□□□□ -1.56
Sftpa1P35242 Mir6374-201ENSMUST00000184003 107 ntBASIC5.32□□□□□ -1.56
Sftpa1P35242 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC5.32□□□□□ -1.56
Sftpa1P35242 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC5.32□□□□□ -1.56
Sftpa1P35242 Ighv1-35-201ENSMUST00000195265 351 ntBASIC5.32□□□□□ -1.56
Sftpa1P35242 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Sftpa1P35242 Gm18702-201ENSMUST00000196923 588 ntBASIC5.32□□□□□ -1.56
Sftpa1P35242 Gm19104-201ENSMUST00000198392 679 ntBASIC5.32□□□□□ -1.56
Sftpa1P35242 Gm5554-201ENSMUST00000199726 1206 ntBASIC5.32□□□□□ -1.56
Sftpa1P35242 Gm18215-201ENSMUST00000204429 798 ntBASIC5.32□□□□□ -1.56
Sftpa1P35242 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Sftpa1P35242 AC171206.1-201ENSMUST00000213612 213 ntBASIC5.32□□□□□ -1.56
Sftpa1P35242 1700092E16Rik-201ENSMUST00000214766 753 ntBASIC5.32□□□□□ -1.56
Sftpa1P35242 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms