Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm29229-201ENSMUST00000188874 323 ntBASIC5.87□□□□□ -1.47
Hoxd3P09027 Gm28241-201ENSMUST00000190916 235 ntBASIC5.87□□□□□ -1.47
Hoxd3P09027 Gm4785-201ENSMUST00000191025 751 ntBASIC5.87□□□□□ -1.47
Hoxd3P09027 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC5.87□□□□□ -1.47
Hoxd3P09027 Gm28266-201ENSMUST00000191410 439 ntBASIC5.87□□□□□ -1.47
Hoxd3P09027 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Hoxd3P09027 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC5.87□□□□□ -1.47
Hoxd3P09027 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC5.87□□□□□ -1.47
Hoxd3P09027 Gm43558-201ENSMUST00000200155 210 ntBASIC5.87□□□□□ -1.47
Hoxd3P09027 4930425L21Rik-201ENSMUST00000203439 899 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Hoxd3P09027 Gm4780-201ENSMUST00000213206 1242 ntBASIC5.87□□□□□ -1.47
Hoxd3P09027 AC192091.1-201ENSMUST00000218668 439 ntBASIC5.87□□□□□ -1.47
Hoxd3P09027 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Hoxd3P09027 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC5.87□□□□□ -1.47
Hoxd3P09027 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC5.87□□□□□ -1.47
Hoxd3P09027 AC125405.2-201ENSMUST00000227862 383 ntBASIC5.87□□□□□ -1.47
Hoxd3P09027 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Hoxd3P09027 Gm5250-201ENSMUST00000059065 321 ntBASIC5.87□□□□□ -1.47
Hoxd3P09027 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Hoxd3P09027 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Hoxd3P09027 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Hoxd3P09027 Ddb1-201ENSMUST00000025649 4155 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Hoxd3P09027 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Hoxd3P09027 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Hoxd3P09027 Cacna1e-203ENSMUST00000187541 14921 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Hoxd3P09027 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Hoxd3P09027 Gm34653-201ENSMUST00000201786 1658 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Hoxd3P09027 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Hoxd3P09027 Plscr2-201ENSMUST00000034932 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Hoxd3P09027 Gm29571-201ENSMUST00000191547 1909 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Hoxd3P09027 Rassf6-201ENSMUST00000031317 1958 ntAPPRIS P3 TSL 5 BASIC5.87□□□□□ -1.47
Hoxd3P09027 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Hoxd3P09027 Gm43948-201ENSMUST00000203474 2376 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Hoxd3P09027 AC124572.1-201ENSMUST00000218155 2406 ntBASIC5.87□□□□□ -1.47
Hoxd3P09027 Uba1y-ps2-201ENSMUST00000190871 2544 ntBASIC5.87□□□□□ -1.47
Hoxd3P09027 Tdrkh-204ENSMUST00000196606 2586 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Hoxd3P09027 Ndrg3-202ENSMUST00000072298 2586 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Hoxd3P09027 Tmc2-202ENSMUST00000166774 2667 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
Hoxd3P09027 Olfr452-204ENSMUST00000217701 2813 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Hoxd3P09027 Gm37278-201ENSMUST00000191619 2872 ntBASIC5.87□□□□□ -1.47
Hoxd3P09027 Pdgfd-203ENSMUST00000214892 2862 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Hoxd3P09027 Masp2-201ENSMUST00000052060 3058 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Hoxd3P09027 Gm42930-201ENSMUST00000200872 3260 ntBASIC5.87□□□□□ -1.47
Hoxd3P09027 Gm37499-201ENSMUST00000194683 3478 ntBASIC5.87□□□□□ -1.47
Hoxd3P09027 Gprasp1-206ENSMUST00000166554 4993 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Hoxd3P09027 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Hoxd3P09027 Zfp180-205ENSMUST00000207002 3690 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Hoxd3P09027 Gm28068-201ENSMUST00000190861 3503 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Hoxd3P09027 Trpc4-201ENSMUST00000029311 3473 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
Hoxd3P09027 Birc2-202ENSMUST00000074246 3130 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Hoxd3P09027 Gm38105-201ENSMUST00000192112 2621 ntBASIC5.86□□□□□ -1.47
Hoxd3P09027 Gm4951-201ENSMUST00000031549 2645 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Hoxd3P09027 Gm37250-201ENSMUST00000194919 2388 ntBASIC5.86□□□□□ -1.47
Hoxd3P09027 Gm26939-201ENSMUST00000177146 2261 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Hoxd3P09027 Olfr743-202ENSMUST00000215793 2203 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Hoxd3P09027 4930402H24Rik-201ENSMUST00000044766 6628 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
Hoxd3P09027 Gm43982-201ENSMUST00000204995 1829 ntBASIC5.86□□□□□ -1.47
Hoxd3P09027 Olfr1499-202ENSMUST00000216659 1834 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Hoxd3P09027 Tctex1d1-202ENSMUST00000116317 1772 ntAPPRIS P3 TSL 5 BASIC5.86□□□□□ -1.47
Hoxd3P09027 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC5.86□□□□□ -1.47
Hoxd3P09027 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Hoxd3P09027 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Hoxd3P09027 Gm16751-201ENSMUST00000142212 1685 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Hoxd3P09027 Zfp462-203ENSMUST00000098070 10465 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
Hoxd3P09027 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Hoxd3P09027 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Hoxd3P09027 Gm7978-201ENSMUST00000178552 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Hoxd3P09027 Gal3st2c-201ENSMUST00000097632 9667 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Hoxd3P09027 Oas1e-203ENSMUST00000201172 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Hoxd3P09027 Ifna14-201ENSMUST00000102808 570 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Hoxd3P09027 Igkv2-137-201ENSMUST00000103302 501 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Hoxd3P09027 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC5.86□□□□□ -1.47
Hoxd3P09027 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC5.86□□□□□ -1.47
Hoxd3P09027 Gm15576-201ENSMUST00000117806 583 ntBASIC5.86□□□□□ -1.47
Hoxd3P09027 Gm14681-201ENSMUST00000118047 411 ntBASIC5.86□□□□□ -1.47
Hoxd3P09027 Gm11346-201ENSMUST00000118346 704 ntBASIC5.86□□□□□ -1.47
Hoxd3P09027 Gm13622-201ENSMUST00000120658 433 ntBASIC5.86□□□□□ -1.47
Hoxd3P09027 Gm25780-201ENSMUST00000122528 253 ntBASIC5.86□□□□□ -1.47
Hoxd3P09027 Gm13857-202ENSMUST00000141091 617 ntTSL 3 BASIC5.86□□□□□ -1.47
Hoxd3P09027 Plxna4os3-202ENSMUST00000143328 277 ntTSL 3 BASIC5.86□□□□□ -1.47
Hoxd3P09027 Gm25982-201ENSMUST00000157920 101 ntBASIC5.86□□□□□ -1.47
Hoxd3P09027 Gm23069-201ENSMUST00000158240 311 ntBASIC5.86□□□□□ -1.47
Hoxd3P09027 Gm25164-201ENSMUST00000158908 116 ntBASIC5.86□□□□□ -1.47
Hoxd3P09027 Gm6507-201ENSMUST00000159767 652 ntTSL 3 BASIC5.86□□□□□ -1.47
Hoxd3P09027 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC5.86□□□□□ -1.47
Hoxd3P09027 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC5.86□□□□□ -1.47
Hoxd3P09027 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC5.86□□□□□ -1.47
Hoxd3P09027 Gm21809-201ENSMUST00000178495 468 ntBASIC5.86□□□□□ -1.47
Hoxd3P09027 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Hoxd3P09027 Gm17412-201ENSMUST00000179261 468 ntBASIC5.86□□□□□ -1.47
Hoxd3P09027 Gm4308-201ENSMUST00000179735 914 ntBASIC5.86□□□□□ -1.47
Hoxd3P09027 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Hoxd3P09027 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC5.86□□□□□ -1.47
Hoxd3P09027 Ank3-208ENSMUST00000182029 3825 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Hoxd3P09027 Gm27699-201ENSMUST00000183553 180 ntBASIC5.86□□□□□ -1.47
Hoxd3P09027 Gm27402-201ENSMUST00000183890 120 ntBASIC5.86□□□□□ -1.47
Hoxd3P09027 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Hoxd3P09027 Gm4301-201ENSMUST00000186197 914 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Hoxd3P09027 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Hoxd3P09027 Gm28164-201ENSMUST00000190143 442 ntBASIC5.86□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms