Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC5.54□□□□□ -1.52
CopeO89079 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CopeO89079 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CopeO89079 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CopeO89079 Epha7-201ENSMUST00000029964 6746 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
CopeO89079 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CopeO89079 AC154640.4-201ENSMUST00000226647 4640 ntBASIC5.54□□□□□ -1.52
CopeO89079 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CopeO89079 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CopeO89079 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CopeO89079 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CopeO89079 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC5.54□□□□□ -1.52
CopeO89079 Trdv4-201ENSMUST00000103679 444 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CopeO89079 Lrrc69-202ENSMUST00000108276 1210 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CopeO89079 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC5.54□□□□□ -1.52
CopeO89079 Gm14529-201ENSMUST00000117894 406 ntBASIC5.54□□□□□ -1.52
CopeO89079 Gm14106-201ENSMUST00000119382 438 ntBASIC5.54□□□□□ -1.52
CopeO89079 Gm15034-201ENSMUST00000120043 349 ntBASIC5.54□□□□□ -1.52
CopeO89079 Atf1-ps-201ENSMUST00000120608 810 ntBASIC5.54□□□□□ -1.52
CopeO89079 Gm11852-201ENSMUST00000120806 222 ntBASIC5.54□□□□□ -1.52
CopeO89079 Gm11278-201ENSMUST00000121002 997 ntBASIC5.54□□□□□ -1.52
CopeO89079 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC5.54□□□□□ -1.52
CopeO89079 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC5.54□□□□□ -1.52
CopeO89079 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC5.54□□□□□ -1.52
CopeO89079 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC5.54□□□□□ -1.52
CopeO89079 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CopeO89079 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC5.54□□□□□ -1.52
CopeO89079 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC5.54□□□□□ -1.52
CopeO89079 Gm9597-201ENSMUST00000171913 602 ntBASIC5.54□□□□□ -1.52
CopeO89079 Gm19560-201ENSMUST00000177510 514 ntBASIC5.54□□□□□ -1.52
CopeO89079 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CopeO89079 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CopeO89079 Gm5734-201ENSMUST00000189787 913 ntBASIC5.54□□□□□ -1.52
CopeO89079 Gm2429-201ENSMUST00000194635 586 ntBASIC5.54□□□□□ -1.52
CopeO89079 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC5.54□□□□□ -1.52
CopeO89079 Gm44412-201ENSMUST00000203018 294 ntBASIC5.54□□□□□ -1.52
CopeO89079 AC159297.1-201ENSMUST00000218689 290 ntBASIC5.54□□□□□ -1.52
CopeO89079 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC5.54□□□□□ -1.52
CopeO89079 AC158511.1-201ENSMUST00000223622 764 ntBASIC5.54□□□□□ -1.52
CopeO89079 AC164426.1-201ENSMUST00000225745 929 ntBASIC5.54□□□□□ -1.52
CopeO89079 Gm37890-201ENSMUST00000195610 3992 ntBASIC5.54□□□□□ -1.52
CopeO89079 Gm4954-201ENSMUST00000135069 1601 ntBASIC5.54□□□□□ -1.52
CopeO89079 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CopeO89079 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CopeO89079 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CopeO89079 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC5.54□□□□□ -1.52
CopeO89079 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CopeO89079 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CopeO89079 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC5.54□□□□□ -1.52
CopeO89079 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CopeO89079 Gm43588-201ENSMUST00000201862 2298 ntBASIC5.54□□□□□ -1.52
CopeO89079 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CopeO89079 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CopeO89079 Gm44255-201ENSMUST00000203456 2053 ntBASIC5.54□□□□□ -1.52
CopeO89079 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CopeO89079 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CopeO89079 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CopeO89079 Gm43696-201ENSMUST00000199385 6071 ntBASIC5.53□□□□□ -1.52
CopeO89079 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
CopeO89079 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC5.53□□□□□ -1.52
CopeO89079 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CopeO89079 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CopeO89079 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CopeO89079 Gm31258-201ENSMUST00000194532 3297 ntBASIC5.53□□□□□ -1.52
CopeO89079 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CopeO89079 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CopeO89079 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
CopeO89079 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CopeO89079 Gm29488-201ENSMUST00000191427 2402 ntBASIC5.53□□□□□ -1.52
CopeO89079 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC5.53□□□□□ -1.52
CopeO89079 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC5.53□□□□□ -1.52
CopeO89079 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CopeO89079 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CopeO89079 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CopeO89079 Mup3-202ENSMUST00000107472 916 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CopeO89079 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC5.53□□□□□ -1.52
CopeO89079 Gm11533-201ENSMUST00000120287 477 ntBASIC5.53□□□□□ -1.52
CopeO89079 Gm13077-201ENSMUST00000121941 484 ntBASIC5.53□□□□□ -1.52
CopeO89079 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC5.53□□□□□ -1.52
CopeO89079 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CopeO89079 Gm26410-201ENSMUST00000157670 261 ntBASIC5.53□□□□□ -1.52
CopeO89079 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
CopeO89079 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC5.53□□□□□ -1.52
CopeO89079 Gm27266-201ENSMUST00000184521 123 ntBASIC5.53□□□□□ -1.52
CopeO89079 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CopeO89079 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC5.53□□□□□ -1.52
CopeO89079 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CopeO89079 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC5.53□□□□□ -1.52
CopeO89079 Gm43175-201ENSMUST00000198450 3810 ntBASIC5.53□□□□□ -1.52
CopeO89079 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC5.53□□□□□ -1.52
CopeO89079 Olfr489-ps1-201ENSMUST00000210404 967 ntBASIC5.53□□□□□ -1.52
CopeO89079 AC112680.2-201ENSMUST00000213119 595 ntBASIC5.53□□□□□ -1.52
CopeO89079 Gm10709-201ENSMUST00000213318 480 ntBASIC5.53□□□□□ -1.52
CopeO89079 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CopeO89079 AC153961.1-201ENSMUST00000217760 385 ntBASIC5.53□□□□□ -1.52
CopeO89079 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC5.53□□□□□ -1.52
CopeO89079 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CopeO89079 AC073562.1-201ENSMUST00000222117 401 ntBASIC5.53□□□□□ -1.52
CopeO89079 AC165260.4-201ENSMUST00000225924 724 ntBASIC5.53□□□□□ -1.52
CopeO89079 AC154618.2-201ENSMUST00000228299 452 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms