Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Scn1aA2APX8 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Scn1aA2APX8 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Scn1aA2APX8 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Scn1aA2APX8 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Scn1aA2APX8 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Scn1aA2APX8 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Scn1aA2APX8 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Scn1aA2APX8 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC5.73□□□□□ -1.49
Scn1aA2APX8 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Scn1aA2APX8 Gm42600-201ENSMUST00000202081 3588 ntBASIC5.72□□□□□ -1.49
Scn1aA2APX8 Gm14175-201ENSMUST00000119835 241 ntBASIC5.72□□□□□ -1.49
Scn1aA2APX8 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC5.72□□□□□ -1.49
Scn1aA2APX8 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC5.72□□□□□ -1.49
Scn1aA2APX8 Gm8256-201ENSMUST00000169178 453 ntBASIC5.72□□□□□ -1.49
Scn1aA2APX8 Gm7335-201ENSMUST00000172475 373 ntBASIC5.72□□□□□ -1.49
Scn1aA2APX8 Gm26765-201ENSMUST00000180844 692 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Scn1aA2APX8 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC5.72□□□□□ -1.49
Scn1aA2APX8 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC5.72□□□□□ -1.49
Scn1aA2APX8 Gm37215-201ENSMUST00000194927 1259 ntBASIC5.72□□□□□ -1.49
Scn1aA2APX8 Gm18215-201ENSMUST00000204429 798 ntBASIC5.72□□□□□ -1.49
Scn1aA2APX8 CT025665.1-201ENSMUST00000215251 1199 ntBASIC5.72□□□□□ -1.49
Scn1aA2APX8 Gm34165-201ENSMUST00000222012 1174 ntBASIC5.72□□□□□ -1.49
Scn1aA2APX8 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC5.72□□□□□ -1.49
Scn1aA2APX8 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC5.72□□□□□ -1.49
Scn1aA2APX8 Gm37018-201ENSMUST00000192441 3869 ntBASIC5.72□□□□□ -1.49
Scn1aA2APX8 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Scn1aA2APX8 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Scn1aA2APX8 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Scn1aA2APX8 AC125487.2-201ENSMUST00000219810 1300 ntBASIC5.72□□□□□ -1.49
Scn1aA2APX8 Gm20287-201ENSMUST00000172848 2367 ntBASIC5.72□□□□□ -1.49
Scn1aA2APX8 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC5.72□□□□□ -1.49
Scn1aA2APX8 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC5.72□□□□□ -1.49
Scn1aA2APX8 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
Scn1aA2APX8 Gm44424-201ENSMUST00000203438 1826 ntBASIC5.72□□□□□ -1.49
Scn1aA2APX8 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
Scn1aA2APX8 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC5.72□□□□□ -1.49
Scn1aA2APX8 Gm37436-201ENSMUST00000193842 1085 ntBASIC5.72□□□□□ -1.49
Scn1aA2APX8 Lrrc72-201ENSMUST00000020853 660 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Scn1aA2APX8 Gm9685-201ENSMUST00000211275 538 ntBASIC5.72□□□□□ -1.49
Scn1aA2APX8 Olfr228-201ENSMUST00000216534 942 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Scn1aA2APX8 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Scn1aA2APX8 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC5.72□□□□□ -1.49
Scn1aA2APX8 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Scn1aA2APX8 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Scn1aA2APX8 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Scn1aA2APX8 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC5.72□□□□□ -1.49
Scn1aA2APX8 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Scn1aA2APX8 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Scn1aA2APX8 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
Scn1aA2APX8 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Scn1aA2APX8 Gm19035-201ENSMUST00000193299 1742 ntBASIC5.71□□□□□ -1.49
Scn1aA2APX8 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Scn1aA2APX8 Olfr1499-202ENSMUST00000216659 1834 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
Scn1aA2APX8 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Scn1aA2APX8 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Scn1aA2APX8 Olfr644-202ENSMUST00000213184 3572 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
Scn1aA2APX8 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Scn1aA2APX8 Gm13430-201ENSMUST00000121366 288 ntBASIC5.71□□□□□ -1.5
Scn1aA2APX8 2010013B24Rik-201ENSMUST00000126922 747 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Scn1aA2APX8 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Scn1aA2APX8 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC5.71□□□□□ -1.5
Scn1aA2APX8 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC5.71□□□□□ -1.5
Scn1aA2APX8 Gm44673-201ENSMUST00000205692 996 ntBASIC5.71□□□□□ -1.5
Scn1aA2APX8 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC5.71□□□□□ -1.5
Scn1aA2APX8 Gm21041-201ENSMUST00000214829 823 ntBASIC5.71□□□□□ -1.5
Scn1aA2APX8 Gm6049-201ENSMUST00000222369 458 ntBASIC5.71□□□□□ -1.5
Scn1aA2APX8 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC5.71□□□□□ -1.5
Scn1aA2APX8 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Scn1aA2APX8 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Scn1aA2APX8 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Scn1aA2APX8 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
Scn1aA2APX8 AC139754.2-201ENSMUST00000218037 1455 ntBASIC5.71□□□□□ -1.5
Scn1aA2APX8 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Scn1aA2APX8 AC154354.1-201ENSMUST00000224585 2109 ntBASIC5.71□□□□□ -1.5
Scn1aA2APX8 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Scn1aA2APX8 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC5.71□□□□□ -1.5
Scn1aA2APX8 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Scn1aA2APX8 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Scn1aA2APX8 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Scn1aA2APX8 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Scn1aA2APX8 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
Scn1aA2APX8 Olfr479-203ENSMUST00000214599 3248 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Scn1aA2APX8 Gm42676-201ENSMUST00000197609 2686 ntBASIC5.7□□□□□ -1.5
Scn1aA2APX8 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scn1aA2APX8 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC5.7□□□□□ -1.5
Scn1aA2APX8 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Scn1aA2APX8 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Scn1aA2APX8 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Scn1aA2APX8 Gm19186-201ENSMUST00000219922 333 ntBASIC5.7□□□□□ -1.5
Scn1aA2APX8 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scn1aA2APX8 Olfr429-201ENSMUST00000060693 943 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Scn1aA2APX8 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Scn1aA2APX8 CT025556.1-201ENSMUST00000222965 1884 ntBASIC5.7□□□□□ -1.5
Scn1aA2APX8 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Scn1aA2APX8 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC5.7□□□□□ -1.5
Scn1aA2APX8 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scn1aA2APX8 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scn1aA2APX8 AC132852.2-201ENSMUST00000216052 2794 ntBASIC5.7□□□□□ -1.5
Scn1aA2APX8 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 129.3 ms