Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm12099-201ENSMUST00000118660 750 ntBASIC5.34□□□□□ -1.55
Trim3Q9R1R2 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC5.34□□□□□ -1.55
Trim3Q9R1R2 Olfr1274-ps-201ENSMUST00000120681 1035 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Trim3Q9R1R2 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC5.34□□□□□ -1.55
Trim3Q9R1R2 Gm15691-201ENSMUST00000138626 849 ntTSL 3 BASIC5.34□□□□□ -1.55
Trim3Q9R1R2 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC5.34□□□□□ -1.55
Trim3Q9R1R2 Gm22867-201ENSMUST00000157499 109 ntBASIC5.34□□□□□ -1.55
Trim3Q9R1R2 Gm24719-201ENSMUST00000157520 110 ntBASIC5.34□□□□□ -1.55
Trim3Q9R1R2 Gm25459-201ENSMUST00000157953 114 ntBASIC5.34□□□□□ -1.55
Trim3Q9R1R2 Gm18199-201ENSMUST00000173820 835 ntBASIC5.34□□□□□ -1.55
Trim3Q9R1R2 Gm7745-201ENSMUST00000182235 973 ntBASIC5.34□□□□□ -1.55
Trim3Q9R1R2 Gm27468-201ENSMUST00000183577 106 ntBASIC5.34□□□□□ -1.55
Trim3Q9R1R2 Mir6973b-201ENSMUST00000184185 80 ntBASIC5.34□□□□□ -1.55
Trim3Q9R1R2 Mocs2-217ENSMUST00000184781 1250 ntTSL 5 BASIC5.34□□□□□ -1.55
Trim3Q9R1R2 Gm7266-201ENSMUST00000187999 405 ntBASIC5.34□□□□□ -1.55
Trim3Q9R1R2 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Trim3Q9R1R2 Gm37203-201ENSMUST00000191618 385 ntBASIC5.34□□□□□ -1.55
Trim3Q9R1R2 Ighv3-2-201ENSMUST00000191842 349 ntBASIC5.34□□□□□ -1.55
Trim3Q9R1R2 Gm36939-201ENSMUST00000194889 439 ntBASIC5.34□□□□□ -1.55
Trim3Q9R1R2 Gm42452-201ENSMUST00000199749 617 ntBASIC5.34□□□□□ -1.55
Trim3Q9R1R2 Gm31861-201ENSMUST00000204563 672 ntBASIC5.34□□□□□ -1.55
Trim3Q9R1R2 Gm8523-201ENSMUST00000211386 552 ntBASIC5.34□□□□□ -1.55
Trim3Q9R1R2 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC5.34□□□□□ -1.55
Trim3Q9R1R2 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Trim3Q9R1R2 AC211878.5-201ENSMUST00000221697 409 ntBASIC5.34□□□□□ -1.55
Trim3Q9R1R2 Gm31063-201ENSMUST00000222636 580 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Trim3Q9R1R2 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC5.34□□□□□ -1.55
Trim3Q9R1R2 Desi2-202ENSMUST00000069568 1193 ntBASIC5.34□□□□□ -1.55
Trim3Q9R1R2 Mir375-201ENSMUST00000083682 64 ntBASIC5.34□□□□□ -1.55
Trim3Q9R1R2 n-R5s69-201ENSMUST00000083872 119 ntBASIC5.34□□□□□ -1.55
Trim3Q9R1R2 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Trim3Q9R1R2 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Trim3Q9R1R2 Gm42725-201ENSMUST00000199296 4193 ntBASIC5.34□□□□□ -1.55
Trim3Q9R1R2 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Trim3Q9R1R2 AC107645.1-201ENSMUST00000228660 1810 ntBASIC5.34□□□□□ -1.55
Trim3Q9R1R2 AC159193.1-201ENSMUST00000222872 2517 ntBASIC5.34□□□□□ -1.56
Trim3Q9R1R2 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Trim3Q9R1R2 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Trim3Q9R1R2 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
Trim3Q9R1R2 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
Trim3Q9R1R2 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Trim3Q9R1R2 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
Trim3Q9R1R2 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Trim3Q9R1R2 Gm38264-201ENSMUST00000194850 2032 ntBASIC5.33□□□□□ -1.56
Trim3Q9R1R2 Gm37082-201ENSMUST00000192629 1927 ntBASIC5.33□□□□□ -1.56
Trim3Q9R1R2 Gm37551-201ENSMUST00000195556 2861 ntBASIC5.33□□□□□ -1.56
Trim3Q9R1R2 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Trim3Q9R1R2 Gm5073-201ENSMUST00000118222 820 ntBASIC5.33□□□□□ -1.56
Trim3Q9R1R2 Gm13013-201ENSMUST00000119087 523 ntBASIC5.33□□□□□ -1.56
Trim3Q9R1R2 Gm14925-201ENSMUST00000120611 438 ntBASIC5.33□□□□□ -1.56
Trim3Q9R1R2 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC5.33□□□□□ -1.56
Trim3Q9R1R2 Gm12293-201ENSMUST00000121898 590 ntBASIC5.33□□□□□ -1.56
Trim3Q9R1R2 Olfr213-201ENSMUST00000121958 984 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Trim3Q9R1R2 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
Trim3Q9R1R2 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC5.33□□□□□ -1.56
Trim3Q9R1R2 Gm20453-201ENSMUST00000173968 226 ntBASIC5.33□□□□□ -1.56
Trim3Q9R1R2 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC5.33□□□□□ -1.56
Trim3Q9R1R2 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC5.33□□□□□ -1.56
Trim3Q9R1R2 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC5.33□□□□□ -1.56
Trim3Q9R1R2 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
Trim3Q9R1R2 Gm37355-201ENSMUST00000193345 606 ntBASIC5.33□□□□□ -1.56
Trim3Q9R1R2 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC5.33□□□□□ -1.56
Trim3Q9R1R2 Ighv1-44-201ENSMUST00000195597 352 ntBASIC5.33□□□□□ -1.56
Trim3Q9R1R2 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Trim3Q9R1R2 Gm42961-201ENSMUST00000202023 181 ntBASIC5.33□□□□□ -1.56
Trim3Q9R1R2 Gm19900-201ENSMUST00000207285 576 ntBASIC5.33□□□□□ -1.56
Trim3Q9R1R2 AC132384.3-201ENSMUST00000219709 472 ntBASIC5.33□□□□□ -1.56
Trim3Q9R1R2 Gm4012-201ENSMUST00000221504 581 ntBASIC5.33□□□□□ -1.56
Trim3Q9R1R2 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Trim3Q9R1R2 AC153794.2-201ENSMUST00000222650 550 ntBASIC5.33□□□□□ -1.56
Trim3Q9R1R2 AC161586.1-201ENSMUST00000223232 547 ntBASIC5.33□□□□□ -1.56
Trim3Q9R1R2 CT025598.1-201ENSMUST00000225140 427 ntBASIC5.33□□□□□ -1.56
Trim3Q9R1R2 Gm23927-201ENSMUST00000082466 215 ntBASIC5.33□□□□□ -1.56
Trim3Q9R1R2 Gm37456-201ENSMUST00000193176 5837 ntBASIC5.33□□□□□ -1.56
Trim3Q9R1R2 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Trim3Q9R1R2 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Trim3Q9R1R2 Olfr31-203ENSMUST00000217035 4126 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Trim3Q9R1R2 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
Trim3Q9R1R2 Gm43389-201ENSMUST00000196080 2595 ntBASIC5.33□□□□□ -1.56
Trim3Q9R1R2 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Trim3Q9R1R2 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
Trim3Q9R1R2 Olfr75-ps1-203ENSMUST00000144832 2655 ntTSL 2 BASIC5.32□□□□□ -1.56
Trim3Q9R1R2 Gm7980-201ENSMUST00000168107 1403 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Trim3Q9R1R2 Olfr461-202ENSMUST00000215009 4292 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Trim3Q9R1R2 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Trim3Q9R1R2 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC5.32□□□□□ -1.56
Trim3Q9R1R2 AC117608.2-201ENSMUST00000224124 1363 ntBASIC5.32□□□□□ -1.56
Trim3Q9R1R2 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Trim3Q9R1R2 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC5.32□□□□□ -1.56
Trim3Q9R1R2 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Trim3Q9R1R2 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC5.32□□□□□ -1.56
Trim3Q9R1R2 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC5.32□□□□□ -1.56
Trim3Q9R1R2 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Trim3Q9R1R2 Gm42702-201ENSMUST00000199515 4217 ntBASIC5.32□□□□□ -1.56
Trim3Q9R1R2 Gm11227-201ENSMUST00000119774 471 ntBASIC5.32□□□□□ -1.56
Trim3Q9R1R2 Gm12322-201ENSMUST00000121605 389 ntBASIC5.32□□□□□ -1.56
Trim3Q9R1R2 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC5.32□□□□□ -1.56
Trim3Q9R1R2 Gm12488-201ENSMUST00000122449 499 ntBASIC5.32□□□□□ -1.56
Trim3Q9R1R2 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC5.32□□□□□ -1.56
Trim3Q9R1R2 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms