Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC5.26□□□□□ -1.57
Cdc40Q9DC48 Gm21756-201ENSMUST00000178380 930 ntBASIC5.26□□□□□ -1.57
Cdc40Q9DC48 Gm21405-201ENSMUST00000179024 930 ntBASIC5.26□□□□□ -1.57
Cdc40Q9DC48 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Cdc40Q9DC48 Gm16531-201ENSMUST00000180658 967 ntBASIC5.26□□□□□ -1.57
Cdc40Q9DC48 Rian-205ENSMUST00000182100 1017 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Cdc40Q9DC48 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC5.26□□□□□ -1.57
Cdc40Q9DC48 Gm21191-201ENSMUST00000186484 930 ntBASIC5.26□□□□□ -1.57
Cdc40Q9DC48 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC5.26□□□□□ -1.57
Cdc40Q9DC48 Gm29467-202ENSMUST00000189669 935 ntTSL 5 BASIC5.26□□□□□ -1.57
Cdc40Q9DC48 Gm29633-207ENSMUST00000190523 737 ntTSL 5 BASIC5.26□□□□□ -1.57
Cdc40Q9DC48 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Cdc40Q9DC48 Gm28467-201ENSMUST00000190981 318 ntBASIC5.26□□□□□ -1.57
Cdc40Q9DC48 Gm29503-201ENSMUST00000191044 930 ntBASIC5.26□□□□□ -1.57
Cdc40Q9DC48 Gm18698-201ENSMUST00000192327 668 ntBASIC5.26□□□□□ -1.57
Cdc40Q9DC48 Gm2979-201ENSMUST00000193442 463 ntBASIC5.26□□□□□ -1.57
Cdc40Q9DC48 Gm44108-201ENSMUST00000203525 422 ntBASIC5.26□□□□□ -1.57
Cdc40Q9DC48 Gm5735-201ENSMUST00000207053 167 ntBASIC5.26□□□□□ -1.57
Cdc40Q9DC48 Gm19196-201ENSMUST00000209258 357 ntBASIC5.26□□□□□ -1.57
Cdc40Q9DC48 Gm8291-201ENSMUST00000209635 1261 ntBASIC5.26□□□□□ -1.57
Cdc40Q9DC48 AC122332.1-201ENSMUST00000214384 285 ntBASIC5.26□□□□□ -1.57
Cdc40Q9DC48 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC5.26□□□□□ -1.57
Cdc40Q9DC48 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Cdc40Q9DC48 AC153800.1-201ENSMUST00000219212 365 ntBASIC5.26□□□□□ -1.57
Cdc40Q9DC48 AC141425.1-201ENSMUST00000224989 265 ntBASIC5.26□□□□□ -1.57
Cdc40Q9DC48 AC123665.4-201ENSMUST00000228790 249 ntBASIC5.26□□□□□ -1.57
Cdc40Q9DC48 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC5.26□□□□□ -1.57
Cdc40Q9DC48 Olfr1110-201ENSMUST00000099861 939 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Cdc40Q9DC48 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Cdc40Q9DC48 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC5.26□□□□□ -1.57
Cdc40Q9DC48 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC5.26□□□□□ -1.57
Cdc40Q9DC48 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Cdc40Q9DC48 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Cdc40Q9DC48 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Cdc40Q9DC48 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Cdc40Q9DC48 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Cdc40Q9DC48 Gm37553-201ENSMUST00000194135 1602 ntBASIC5.26□□□□□ -1.57
Cdc40Q9DC48 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Cdc40Q9DC48 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Cdc40Q9DC48 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Cdc40Q9DC48 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
Cdc40Q9DC48 Gm43386-201ENSMUST00000199654 4001 ntBASIC5.26□□□□□ -1.57
Cdc40Q9DC48 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Cdc40Q9DC48 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Cdc40Q9DC48 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Cdc40Q9DC48 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC5.25□□□□□ -1.57
Cdc40Q9DC48 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Cdc40Q9DC48 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Cdc40Q9DC48 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC5.25□□□□□ -1.57
Cdc40Q9DC48 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC5.25□□□□□ -1.57
Cdc40Q9DC48 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Cdc40Q9DC48 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC5.25□□□□□ -1.57
Cdc40Q9DC48 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC5.25□□□□□ -1.57
Cdc40Q9DC48 CT030159.1-201ENSMUST00000221580 2261 ntBASIC5.25□□□□□ -1.57
Cdc40Q9DC48 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC5.25□□□□□ -1.57
Cdc40Q9DC48 Gm45562-201ENSMUST00000210015 1537 ntBASIC5.25□□□□□ -1.57
Cdc40Q9DC48 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Cdc40Q9DC48 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Cdc40Q9DC48 Gm25919-201ENSMUST00000104271 132 ntBASIC5.25□□□□□ -1.57
Cdc40Q9DC48 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Cdc40Q9DC48 Gm14220-201ENSMUST00000118114 449 ntBASIC5.25□□□□□ -1.57
Cdc40Q9DC48 Gm14521-201ENSMUST00000119545 350 ntBASIC5.25□□□□□ -1.57
Cdc40Q9DC48 Defa-ps11-201ENSMUST00000119719 299 ntBASIC5.25□□□□□ -1.57
Cdc40Q9DC48 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC5.25□□□□□ -1.57
Cdc40Q9DC48 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC5.25□□□□□ -1.57
Cdc40Q9DC48 Gm22959-201ENSMUST00000122514 303 ntBASIC5.25□□□□□ -1.57
Cdc40Q9DC48 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC5.25□□□□□ -1.57
Cdc40Q9DC48 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Cdc40Q9DC48 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC5.25□□□□□ -1.57
Cdc40Q9DC48 Esd-ps-201ENSMUST00000170684 847 ntBASIC5.25□□□□□ -1.57
Cdc40Q9DC48 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Cdc40Q9DC48 Gm27887-201ENSMUST00000184367 102 ntBASIC5.25□□□□□ -1.57
Cdc40Q9DC48 Gm28943-201ENSMUST00000186187 615 ntBASIC5.25□□□□□ -1.57
Cdc40Q9DC48 Gm28736-201ENSMUST00000186257 615 ntBASIC5.25□□□□□ -1.57
Cdc40Q9DC48 Gm29401-201ENSMUST00000186690 615 ntBASIC5.25□□□□□ -1.57
Cdc40Q9DC48 Gm29178-204ENSMUST00000186784 615 ntBASIC5.25□□□□□ -1.57
Cdc40Q9DC48 Gm28589-201ENSMUST00000186991 615 ntBASIC5.25□□□□□ -1.57
Cdc40Q9DC48 Gm28936-201ENSMUST00000187153 615 ntBASIC5.25□□□□□ -1.57
Cdc40Q9DC48 Gm29121-201ENSMUST00000187611 615 ntBASIC5.25□□□□□ -1.57
Cdc40Q9DC48 Gm28243-201ENSMUST00000187801 615 ntBASIC5.25□□□□□ -1.57
Cdc40Q9DC48 Gm28844-202ENSMUST00000187977 615 ntBASIC5.25□□□□□ -1.57
Cdc40Q9DC48 Gm29058-201ENSMUST00000189510 615 ntBASIC5.25□□□□□ -1.57
Cdc40Q9DC48 Gm29624-201ENSMUST00000190018 615 ntBASIC5.25□□□□□ -1.57
Cdc40Q9DC48 Gm28780-201ENSMUST00000190223 615 ntBASIC5.25□□□□□ -1.57
Cdc40Q9DC48 Gm28969-211ENSMUST00000190992 615 ntBASIC5.25□□□□□ -1.57
Cdc40Q9DC48 Gm28990-207ENSMUST00000191219 615 ntBASIC5.25□□□□□ -1.57
Cdc40Q9DC48 Gm36468-201ENSMUST00000192119 615 ntBASIC5.25□□□□□ -1.57
Cdc40Q9DC48 Gm2367-201ENSMUST00000192374 472 ntBASIC5.25□□□□□ -1.57
Cdc40Q9DC48 Gm31572-201ENSMUST00000193341 615 ntBASIC5.25□□□□□ -1.57
Cdc40Q9DC48 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Cdc40Q9DC48 Gm30175-201ENSMUST00000194173 615 ntBASIC5.25□□□□□ -1.57
Cdc40Q9DC48 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Cdc40Q9DC48 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC5.25□□□□□ -1.57
Cdc40Q9DC48 Gm30858-201ENSMUST00000195516 615 ntBASIC5.25□□□□□ -1.57
Cdc40Q9DC48 Gm8920-201ENSMUST00000196153 924 ntBASIC5.25□□□□□ -1.57
Cdc40Q9DC48 Gm43361-201ENSMUST00000196562 4690 ntBASIC5.25□□□□□ -1.57
Cdc40Q9DC48 Igkv3-8-201ENSMUST00000197635 339 ntBASIC5.25□□□□□ -1.57
Cdc40Q9DC48 Gm43608-201ENSMUST00000197703 687 ntTSL 3 BASIC5.25□□□□□ -1.57
Cdc40Q9DC48 Gm42640-201ENSMUST00000199792 1195 ntBASIC5.25□□□□□ -1.57
Cdc40Q9DC48 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms