Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm12005-201ENSMUST00000121451 379 ntBASIC5.26□□□□□ -1.57
Use1Q9CQ56 Gm25291-201ENSMUST00000122795 144 ntBASIC5.26□□□□□ -1.57
Use1Q9CQ56 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Use1Q9CQ56 Gm24179-201ENSMUST00000158925 127 ntBASIC5.26□□□□□ -1.57
Use1Q9CQ56 Gm17366-201ENSMUST00000167629 187 ntBASIC5.26□□□□□ -1.57
Use1Q9CQ56 Gm20545-201ENSMUST00000174739 210 ntBASIC5.26□□□□□ -1.57
Use1Q9CQ56 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC5.26□□□□□ -1.57
Use1Q9CQ56 Gm8581-201ENSMUST00000188636 890 ntBASIC5.26□□□□□ -1.57
Use1Q9CQ56 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Use1Q9CQ56 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC5.26□□□□□ -1.57
Use1Q9CQ56 Gm44431-201ENSMUST00000203500 413 ntBASIC5.26□□□□□ -1.57
Use1Q9CQ56 Gm44277-201ENSMUST00000205128 649 ntBASIC5.26□□□□□ -1.57
Use1Q9CQ56 Gm19880-201ENSMUST00000207731 318 ntBASIC5.26□□□□□ -1.57
Use1Q9CQ56 Gm19921-201ENSMUST00000210505 703 ntBASIC5.26□□□□□ -1.57
Use1Q9CQ56 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC5.26□□□□□ -1.57
Use1Q9CQ56 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC5.26□□□□□ -1.57
Use1Q9CQ56 Gm8137-201ENSMUST00000218997 463 ntBASIC5.26□□□□□ -1.57
Use1Q9CQ56 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC5.26□□□□□ -1.57
Use1Q9CQ56 AC156037.1-201ENSMUST00000221133 127 ntBASIC5.26□□□□□ -1.57
Use1Q9CQ56 AC125543.3-201ENSMUST00000221991 126 ntBASIC5.26□□□□□ -1.57
Use1Q9CQ56 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Use1Q9CQ56 Magea4-201ENSMUST00000048675 948 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Use1Q9CQ56 Aph1c-201ENSMUST00000057261 715 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Use1Q9CQ56 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Use1Q9CQ56 Nms-201ENSMUST00000088029 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Use1Q9CQ56 Olfr356-201ENSMUST00000095021 948 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Use1Q9CQ56 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC5.26□□□□□ -1.57
Use1Q9CQ56 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC5.26□□□□□ -1.57
Use1Q9CQ56 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC5.26□□□□□ -1.57
Use1Q9CQ56 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
Use1Q9CQ56 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Use1Q9CQ56 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Use1Q9CQ56 Gm44829-201ENSMUST00000208008 3193 ntBASIC5.26□□□□□ -1.57
Use1Q9CQ56 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
Use1Q9CQ56 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Use1Q9CQ56 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Use1Q9CQ56 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Use1Q9CQ56 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Use1Q9CQ56 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Use1Q9CQ56 Gm42662-201ENSMUST00000202539 1431 ntBASIC5.25□□□□□ -1.57
Use1Q9CQ56 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
Use1Q9CQ56 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Use1Q9CQ56 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Use1Q9CQ56 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Use1Q9CQ56 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC5.25□□□□□ -1.57
Use1Q9CQ56 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Use1Q9CQ56 Mir700-201ENSMUST00000102169 79 ntBASIC5.25□□□□□ -1.57
Use1Q9CQ56 Gm23839-201ENSMUST00000116957 109 ntBASIC5.25□□□□□ -1.57
Use1Q9CQ56 Gm15781-201ENSMUST00000120216 323 ntBASIC5.25□□□□□ -1.57
Use1Q9CQ56 Gm12890-201ENSMUST00000120885 373 ntBASIC5.25□□□□□ -1.57
Use1Q9CQ56 Gm7309-201ENSMUST00000121670 581 ntBASIC5.25□□□□□ -1.57
Use1Q9CQ56 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Use1Q9CQ56 Gm14092-201ENSMUST00000136794 617 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Use1Q9CQ56 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Use1Q9CQ56 Gm25439-201ENSMUST00000158280 131 ntBASIC5.25□□□□□ -1.57
Use1Q9CQ56 Gm23149-201ENSMUST00000158837 230 ntBASIC5.25□□□□□ -1.57
Use1Q9CQ56 Stk-ps1-201ENSMUST00000173340 1074 ntBASIC5.25□□□□□ -1.57
Use1Q9CQ56 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC5.25□□□□□ -1.57
Use1Q9CQ56 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Use1Q9CQ56 Gm26851-201ENSMUST00000181867 918 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Use1Q9CQ56 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
Use1Q9CQ56 Gm44312-201ENSMUST00000203536 469 ntBASIC5.25□□□□□ -1.57
Use1Q9CQ56 1700051K13Rik-201ENSMUST00000204426 696 ntBASIC5.25□□□□□ -1.57
Use1Q9CQ56 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Use1Q9CQ56 Gm18467-201ENSMUST00000208805 434 ntBASIC5.25□□□□□ -1.57
Use1Q9CQ56 Gm45722-201ENSMUST00000213075 466 ntBASIC5.25□□□□□ -1.57
Use1Q9CQ56 AC124445.1-201ENSMUST00000218613 452 ntBASIC5.25□□□□□ -1.57
Use1Q9CQ56 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Use1Q9CQ56 AC133598.3-204ENSMUST00000224260 767 ntBASIC5.25□□□□□ -1.57
Use1Q9CQ56 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
Use1Q9CQ56 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Use1Q9CQ56 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Use1Q9CQ56 Gm17165-201ENSMUST00000096155 493 ntBASIC5.25□□□□□ -1.57
Use1Q9CQ56 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
Use1Q9CQ56 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC5.25□□□□□ -1.57
Use1Q9CQ56 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Use1Q9CQ56 Gm38387-201ENSMUST00000191945 2577 ntBASIC5.25□□□□□ -1.57
Use1Q9CQ56 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Use1Q9CQ56 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Use1Q9CQ56 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC5.25□□□□□ -1.57
Use1Q9CQ56 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Use1Q9CQ56 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
Use1Q9CQ56 Gm43085-201ENSMUST00000202859 3132 ntBASIC5.25□□□□□ -1.57
Use1Q9CQ56 Gm8980-201ENSMUST00000140232 2197 ntBASIC5.25□□□□□ -1.57
Use1Q9CQ56 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Use1Q9CQ56 Olfr907-203ENSMUST00000214264 1910 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Use1Q9CQ56 Olfr559-202ENSMUST00000215657 1560 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Use1Q9CQ56 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Use1Q9CQ56 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Use1Q9CQ56 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Use1Q9CQ56 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC5.24□□□□□ -1.57
Use1Q9CQ56 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
Use1Q9CQ56 Fam107b-209ENSMUST00000226435 3602 ntBASIC5.24□□□□□ -1.57
Use1Q9CQ56 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
Use1Q9CQ56 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Use1Q9CQ56 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
Use1Q9CQ56 Gm11885-201ENSMUST00000118473 1428 ntBASIC5.24□□□□□ -1.57
Use1Q9CQ56 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Use1Q9CQ56 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC5.24□□□□□ -1.57
Use1Q9CQ56 Olfr31-203ENSMUST00000217035 4126 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms