Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC7.43□□□□□ -1.22
Trim11Q99PQ2 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Trim11Q99PQ2 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC7.43□□□□□ -1.22
Trim11Q99PQ2 Gm29356-201ENSMUST00000186935 373 ntBASIC7.43□□□□□ -1.22
Trim11Q99PQ2 Gm29383-201ENSMUST00000188284 480 ntBASIC7.43□□□□□ -1.22
Trim11Q99PQ2 Gm38279-201ENSMUST00000194067 1131 ntBASIC7.43□□□□□ -1.22
Trim11Q99PQ2 Asb17os-202ENSMUST00000200329 497 ntTSL 3 BASIC7.43□□□□□ -1.22
Trim11Q99PQ2 Gm44989-201ENSMUST00000204749 217 ntBASIC7.43□□□□□ -1.22
Trim11Q99PQ2 Gm17992-201ENSMUST00000207346 1072 ntBASIC7.43□□□□□ -1.22
Trim11Q99PQ2 Gm9373-201ENSMUST00000208724 599 ntBASIC7.43□□□□□ -1.22
Trim11Q99PQ2 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Trim11Q99PQ2 AC102582.2-201ENSMUST00000214658 1137 ntTSL 5 BASIC7.43□□□□□ -1.22
Trim11Q99PQ2 Gm18338-201ENSMUST00000222381 560 ntBASIC7.43□□□□□ -1.22
Trim11Q99PQ2 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC7.43□□□□□ -1.22
Trim11Q99PQ2 AC116319.2-201ENSMUST00000228159 984 ntBASIC7.43□□□□□ -1.22
Trim11Q99PQ2 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Trim11Q99PQ2 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
Trim11Q99PQ2 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC7.43□□□□□ -1.22
Trim11Q99PQ2 Gm9226-201ENSMUST00000188352 3489 ntBASIC7.43□□□□□ -1.22
Trim11Q99PQ2 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Trim11Q99PQ2 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Trim11Q99PQ2 Dock7-214ENSMUST00000205650 6297 ntAPPRIS P3 TSL 5 BASIC7.43□□□□□ -1.22
Trim11Q99PQ2 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Trim11Q99PQ2 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Trim11Q99PQ2 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Trim11Q99PQ2 AC098728.1-202ENSMUST00000226656 2198 ntBASIC7.43□□□□□ -1.22
Trim11Q99PQ2 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Trim11Q99PQ2 AC134917.1-201ENSMUST00000220517 1449 ntBASIC7.43□□□□□ -1.22
Trim11Q99PQ2 Gm44676-201ENSMUST00000208520 3055 ntBASIC7.43□□□□□ -1.22
Trim11Q99PQ2 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Olfr958-203ENSMUST00000217227 3831 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Trim11Q99PQ2 AC134577.3-201ENSMUST00000226490 3000 ntBASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Gm25943-201ENSMUST00000103791 90 ntBASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Mir466b-7-201ENSMUST00000103804 88 ntBASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Mir466b-5-201ENSMUST00000103900 88 ntBASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Gm2178-201ENSMUST00000104927 357 ntBASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Gm12643-201ENSMUST00000116078 374 ntBASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Gm14981-201ENSMUST00000117325 943 ntBASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Gm16383-201ENSMUST00000118122 232 ntBASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Gm11833-201ENSMUST00000118393 853 ntBASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Gm13604-201ENSMUST00000119332 482 ntBASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Gm11553-201ENSMUST00000120682 240 ntBASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Gm13024-201ENSMUST00000121756 718 ntBASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Gm11787-201ENSMUST00000121996 1050 ntBASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Gm15868-201ENSMUST00000144291 520 ntTSL 5 BASIC7.42□□□□□ -1.22
Trim11Q99PQ2 9630013K17Rik-201ENSMUST00000146915 1072 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Gm23071-201ENSMUST00000158242 115 ntBASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Gm17085-201ENSMUST00000165425 502 ntBASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Gm9529-201ENSMUST00000177598 579 ntBASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Mir466b-4-201ENSMUST00000178801 90 ntBASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Gm25285-201ENSMUST00000178951 90 ntBASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Mir466b-6-201ENSMUST00000180061 90 ntBASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Mir466c-2-201ENSMUST00000180211 90 ntBASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Mir8114-201ENSMUST00000183582 111 ntBASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Gm42799-201ENSMUST00000201331 328 ntBASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Gm36378-201ENSMUST00000201709 388 ntBASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Gm21054-201ENSMUST00000203981 380 ntBASIC7.42□□□□□ -1.22
Trim11Q99PQ2 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Gm31522-201ENSMUST00000207942 762 ntTSL 5 BASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Olfr1500-206ENSMUST00000217079 1025 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Trim11Q99PQ2 AC132384.8-201ENSMUST00000218152 1204 ntBASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC7.42□□□□□ -1.22
Trim11Q99PQ2 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Gm2754-201ENSMUST00000223383 589 ntBASIC7.42□□□□□ -1.22
Trim11Q99PQ2 AC161275.1-201ENSMUST00000224668 208 ntBASIC7.42□□□□□ -1.22
Trim11Q99PQ2 AC116656.1-201ENSMUST00000227040 755 ntBASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Gm25739-201ENSMUST00000082886 107 ntBASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Gm19368-201ENSMUST00000221258 4424 ntBASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Trim11Q99PQ2 AC147639.2-202ENSMUST00000224834 1545 ntBASIC7.42□□□□□ -1.22
Trim11Q99PQ2 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Trim11Q99PQ2 AC141476.1-201ENSMUST00000224988 3387 ntBASIC7.42□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms