Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
Brf1Q8CFK2 Gm22953-201ENSMUST00000116724 101 ntBASIC6.93□□□□□ -1.3
Brf1Q8CFK2 Defa-ps11-201ENSMUST00000119719 299 ntBASIC6.93□□□□□ -1.3
Brf1Q8CFK2 Olfr1376-ps1-201ENSMUST00000121306 955 ntBASIC6.93□□□□□ -1.3
Brf1Q8CFK2 Gm7309-201ENSMUST00000121670 581 ntBASIC6.93□□□□□ -1.3
Brf1Q8CFK2 Gm24692-201ENSMUST00000157761 146 ntBASIC6.93□□□□□ -1.3
Brf1Q8CFK2 Gm22724-201ENSMUST00000158091 127 ntBASIC6.93□□□□□ -1.3
Brf1Q8CFK2 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Brf1Q8CFK2 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
Brf1Q8CFK2 Gm17164-201ENSMUST00000169013 506 ntBASIC6.93□□□□□ -1.3
Brf1Q8CFK2 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC6.93□□□□□ -1.3
Brf1Q8CFK2 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Brf1Q8CFK2 Gm38224-201ENSMUST00000191648 2100 ntBASIC6.93□□□□□ -1.3
Brf1Q8CFK2 Gm37609-201ENSMUST00000191778 678 ntBASIC6.93□□□□□ -1.3
Brf1Q8CFK2 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Brf1Q8CFK2 Gm44993-201ENSMUST00000208435 842 ntTSL 3 BASIC6.93□□□□□ -1.3
Brf1Q8CFK2 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC6.93□□□□□ -1.3
Brf1Q8CFK2 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Brf1Q8CFK2 Olfr854-202ENSMUST00000212872 939 ntAPPRIS ALT2 BASIC6.93□□□□□ -1.3
Brf1Q8CFK2 AC154734.1-201ENSMUST00000219957 2141 ntBASIC6.93□□□□□ -1.3
Brf1Q8CFK2 Gm40394-201ENSMUST00000221321 633 ntTSL 5 BASIC6.93□□□□□ -1.3
Brf1Q8CFK2 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC6.93□□□□□ -1.3
Brf1Q8CFK2 Gm19154-201ENSMUST00000223330 940 ntBASIC6.93□□□□□ -1.3
Brf1Q8CFK2 AC165092.4-201ENSMUST00000225025 679 ntBASIC6.93□□□□□ -1.3
Brf1Q8CFK2 Tas2r103-201ENSMUST00000032317 939 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Brf1Q8CFK2 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC6.93□□□□□ -1.3
Brf1Q8CFK2 Gm7887-201ENSMUST00000056948 537 ntBASIC6.93□□□□□ -1.3
Brf1Q8CFK2 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Brf1Q8CFK2 Mir375-201ENSMUST00000083682 64 ntBASIC6.93□□□□□ -1.3
Brf1Q8CFK2 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Brf1Q8CFK2 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Brf1Q8CFK2 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC6.93□□□□□ -1.3
Brf1Q8CFK2 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Brf1Q8CFK2 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Brf1Q8CFK2 AC153959.1-201ENSMUST00000213617 1694 ntBASIC6.93□□□□□ -1.3
Brf1Q8CFK2 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Brf1Q8CFK2 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Brf1Q8CFK2 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Brf1Q8CFK2 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Brf1Q8CFK2 Gm15011-201ENSMUST00000117724 1480 ntBASIC6.92□□□□□ -1.3
Brf1Q8CFK2 Gm6300-201ENSMUST00000192393 1498 ntBASIC6.92□□□□□ -1.3
Brf1Q8CFK2 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Brf1Q8CFK2 AC121942.1-201ENSMUST00000224459 2891 ntBASIC6.92□□□□□ -1.3
Brf1Q8CFK2 Gm43745-201ENSMUST00000198085 1883 ntBASIC6.92□□□□□ -1.3
Brf1Q8CFK2 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Brf1Q8CFK2 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Brf1Q8CFK2 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Brf1Q8CFK2 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
Brf1Q8CFK2 Gm4954-201ENSMUST00000135069 1601 ntBASIC6.92□□□□□ -1.3
Brf1Q8CFK2 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Brf1Q8CFK2 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Brf1Q8CFK2 Gm14833-201ENSMUST00000118345 1027 ntBASIC6.92□□□□□ -1.3
Brf1Q8CFK2 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Brf1Q8CFK2 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC6.92□□□□□ -1.3
Brf1Q8CFK2 Gm24383-201ENSMUST00000122691 333 ntBASIC6.92□□□□□ -1.3
Brf1Q8CFK2 Gm14288-202ENSMUST00000123863 267 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
Brf1Q8CFK2 Gm23280-201ENSMUST00000157905 139 ntBASIC6.92□□□□□ -1.3
Brf1Q8CFK2 Gm23408-201ENSMUST00000158523 265 ntBASIC6.92□□□□□ -1.3
Brf1Q8CFK2 Gm18343-201ENSMUST00000172802 604 ntBASIC6.92□□□□□ -1.3
Brf1Q8CFK2 Gm18199-201ENSMUST00000173820 835 ntBASIC6.92□□□□□ -1.3
Brf1Q8CFK2 Gm23631-201ENSMUST00000175291 123 ntBASIC6.92□□□□□ -1.3
Brf1Q8CFK2 Gm28803-201ENSMUST00000190385 764 ntBASIC6.92□□□□□ -1.3
Brf1Q8CFK2 Gm37932-201ENSMUST00000192258 1167 ntBASIC6.92□□□□□ -1.3
Brf1Q8CFK2 Gm43148-201ENSMUST00000198237 520 ntBASIC6.92□□□□□ -1.3
Brf1Q8CFK2 Gm45008-201ENSMUST00000206420 493 ntBASIC6.92□□□□□ -1.3
Brf1Q8CFK2 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC6.92□□□□□ -1.3
Brf1Q8CFK2 Gm7990-201ENSMUST00000212126 593 ntBASIC6.92□□□□□ -1.3
Brf1Q8CFK2 AC123835.1-201ENSMUST00000214362 670 ntBASIC6.92□□□□□ -1.3
Brf1Q8CFK2 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC6.92□□□□□ -1.3
Brf1Q8CFK2 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC6.92□□□□□ -1.3
Brf1Q8CFK2 AC154595.2-201ENSMUST00000225067 310 ntBASIC6.92□□□□□ -1.3
Brf1Q8CFK2 AL589696.1-201ENSMUST00000225711 330 ntBASIC6.92□□□□□ -1.3
Brf1Q8CFK2 AC154692.1-201ENSMUST00000228314 544 ntBASIC6.92□□□□□ -1.3
Brf1Q8CFK2 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Brf1Q8CFK2 Gm10221-201ENSMUST00000088299 309 ntBASIC6.92□□□□□ -1.3
Brf1Q8CFK2 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Brf1Q8CFK2 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Brf1Q8CFK2 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
Brf1Q8CFK2 Olfr488-202ENSMUST00000211508 4624 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
Brf1Q8CFK2 Olfr488-203ENSMUST00000215173 4605 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
Brf1Q8CFK2 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Brf1Q8CFK2 Olfr1054-202ENSMUST00000213205 1410 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Brf1Q8CFK2 Gm43319-201ENSMUST00000198036 2270 ntBASIC6.92□□□□□ -1.3
Brf1Q8CFK2 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC6.91□□□□□ -1.3
Brf1Q8CFK2 Gm18491-201ENSMUST00000192492 1594 ntBASIC6.91□□□□□ -1.3
Brf1Q8CFK2 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Brf1Q8CFK2 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Brf1Q8CFK2 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Brf1Q8CFK2 AC159476.1-201ENSMUST00000215914 1668 ntBASIC6.91□□□□□ -1.3
Brf1Q8CFK2 Gm46199-201ENSMUST00000220373 1693 ntBASIC6.91□□□□□ -1.3
Brf1Q8CFK2 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Brf1Q8CFK2 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Brf1Q8CFK2 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Brf1Q8CFK2 Mir466f-4-201ENSMUST00000116930 121 ntBASIC6.91□□□□□ -1.3
Brf1Q8CFK2 Gm12656-201ENSMUST00000118149 577 ntBASIC6.91□□□□□ -1.3
Brf1Q8CFK2 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC6.91□□□□□ -1.3
Brf1Q8CFK2 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Brf1Q8CFK2 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC6.91□□□□□ -1.3
Brf1Q8CFK2 Gm23662-201ENSMUST00000158046 111 ntBASIC6.91□□□□□ -1.3
Brf1Q8CFK2 Gm9006-201ENSMUST00000165520 841 ntBASIC6.91□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms