Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ccdc28aQ8CEI3 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Ccdc28aQ8CEI3 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ccdc28aQ8CEI3 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Ccdc28aQ8CEI3 Gm14744-201ENSMUST00000114039 800 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ccdc28aQ8CEI3 Gm14529-201ENSMUST00000117894 406 ntBASIC5.69□□□□□ -1.5
Ccdc28aQ8CEI3 Gm16200-201ENSMUST00000120385 331 ntBASIC5.69□□□□□ -1.5
Ccdc28aQ8CEI3 Gm8545-201ENSMUST00000120692 801 ntBASIC5.69□□□□□ -1.5
Ccdc28aQ8CEI3 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC5.69□□□□□ -1.5
Ccdc28aQ8CEI3 Gm25387-201ENSMUST00000157813 132 ntBASIC5.69□□□□□ -1.5
Ccdc28aQ8CEI3 Gm17907-201ENSMUST00000173150 710 ntBASIC5.69□□□□□ -1.5
Ccdc28aQ8CEI3 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Ccdc28aQ8CEI3 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC5.69□□□□□ -1.5
Ccdc28aQ8CEI3 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
Ccdc28aQ8CEI3 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC5.69□□□□□ -1.5
Ccdc28aQ8CEI3 Gm29467-202ENSMUST00000189669 935 ntTSL 5 BASIC5.69□□□□□ -1.5
Ccdc28aQ8CEI3 Gm29633-207ENSMUST00000190523 737 ntTSL 5 BASIC5.69□□□□□ -1.5
Ccdc28aQ8CEI3 Ighv1-14-201ENSMUST00000194015 402 ntBASIC5.69□□□□□ -1.5
Ccdc28aQ8CEI3 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ccdc28aQ8CEI3 Gm18851-201ENSMUST00000210087 1058 ntBASIC5.69□□□□□ -1.5
Ccdc28aQ8CEI3 Olfr489-ps1-201ENSMUST00000210404 967 ntBASIC5.69□□□□□ -1.5
Ccdc28aQ8CEI3 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC5.69□□□□□ -1.5
Ccdc28aQ8CEI3 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ccdc28aQ8CEI3 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ccdc28aQ8CEI3 Olfr1312-201ENSMUST00000099600 954 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Ccdc28aQ8CEI3 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Ccdc28aQ8CEI3 Gm43343-201ENSMUST00000202454 1926 ntBASIC5.69□□□□□ -1.5
Ccdc28aQ8CEI3 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Ccdc28aQ8CEI3 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ccdc28aQ8CEI3 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Ccdc28aQ8CEI3 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ccdc28aQ8CEI3 Galnt1-208ENSMUST00000178605 3796 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ccdc28aQ8CEI3 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Ccdc28aQ8CEI3 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Ccdc28aQ8CEI3 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC5.69□□□□□ -1.5
Ccdc28aQ8CEI3 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ccdc28aQ8CEI3 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC5.69□□□□□ -1.5
Ccdc28aQ8CEI3 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ccdc28aQ8CEI3 Gm6503-201ENSMUST00000210829 2225 ntBASIC5.68□□□□□ -1.5
Ccdc28aQ8CEI3 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Ccdc28aQ8CEI3 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ccdc28aQ8CEI3 Gm37890-201ENSMUST00000195610 3992 ntBASIC5.68□□□□□ -1.5
Ccdc28aQ8CEI3 Gm43696-201ENSMUST00000199385 6071 ntBASIC5.68□□□□□ -1.5
Ccdc28aQ8CEI3 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Ccdc28aQ8CEI3 Gm44667-201ENSMUST00000207632 3337 ntBASIC5.68□□□□□ -1.5
Ccdc28aQ8CEI3 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Ccdc28aQ8CEI3 Olfr972-202ENSMUST00000215303 1641 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
Ccdc28aQ8CEI3 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Ccdc28aQ8CEI3 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC5.68□□□□□ -1.5
Ccdc28aQ8CEI3 Trdv4-201ENSMUST00000103679 444 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Ccdc28aQ8CEI3 Mup3-202ENSMUST00000107472 916 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ccdc28aQ8CEI3 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC5.68□□□□□ -1.5
Ccdc28aQ8CEI3 Gm11852-201ENSMUST00000120806 222 ntBASIC5.68□□□□□ -1.5
Ccdc28aQ8CEI3 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC5.68□□□□□ -1.5
Ccdc28aQ8CEI3 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC5.68□□□□□ -1.5
Ccdc28aQ8CEI3 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Ccdc28aQ8CEI3 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC5.68□□□□□ -1.5
Ccdc28aQ8CEI3 Gm22599-201ENSMUST00000157597 132 ntBASIC5.68□□□□□ -1.5
Ccdc28aQ8CEI3 Gm19560-201ENSMUST00000177510 514 ntBASIC5.68□□□□□ -1.5
Ccdc28aQ8CEI3 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ccdc28aQ8CEI3 Gm26671-201ENSMUST00000180423 1157 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Ccdc28aQ8CEI3 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Ccdc28aQ8CEI3 Frmd8os-202ENSMUST00000187697 516 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Ccdc28aQ8CEI3 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Ccdc28aQ8CEI3 Gm2429-201ENSMUST00000194635 586 ntBASIC5.68□□□□□ -1.5
Ccdc28aQ8CEI3 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC5.68□□□□□ -1.5
Ccdc28aQ8CEI3 Ighv1-83-201ENSMUST00000199643 351 ntBASIC5.68□□□□□ -1.5
Ccdc28aQ8CEI3 Gm4874-201ENSMUST00000203589 691 ntBASIC5.68□□□□□ -1.5
Ccdc28aQ8CEI3 Gm44307-201ENSMUST00000204466 764 ntBASIC5.68□□□□□ -1.5
Ccdc28aQ8CEI3 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC5.68□□□□□ -1.5
Ccdc28aQ8CEI3 Gm34853-201ENSMUST00000211662 509 ntTSL 5 BASIC5.68□□□□□ -1.5
Ccdc28aQ8CEI3 AC133650.1-201ENSMUST00000217243 578 ntBASIC5.68□□□□□ -1.5
Ccdc28aQ8CEI3 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC5.68□□□□□ -1.5
Ccdc28aQ8CEI3 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC5.68□□□□□ -1.5
Ccdc28aQ8CEI3 AC158511.1-201ENSMUST00000223622 764 ntBASIC5.68□□□□□ -1.5
Ccdc28aQ8CEI3 Olfr166-201ENSMUST00000074739 1040 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Ccdc28aQ8CEI3 Gm6990-201ENSMUST00000086830 348 ntBASIC5.68□□□□□ -1.5
Ccdc28aQ8CEI3 Gm8444-201ENSMUST00000092020 357 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Ccdc28aQ8CEI3 AC116797.2-201ENSMUST00000224763 4221 ntBASIC5.68□□□□□ -1.5
Ccdc28aQ8CEI3 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Ccdc28aQ8CEI3 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC5.68□□□□□ -1.5
Ccdc28aQ8CEI3 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Ccdc28aQ8CEI3 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Ccdc28aQ8CEI3 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ccdc28aQ8CEI3 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC5.68□□□□□ -1.5
Ccdc28aQ8CEI3 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ccdc28aQ8CEI3 AC154640.4-201ENSMUST00000226647 4640 ntBASIC5.68□□□□□ -1.5
Ccdc28aQ8CEI3 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ccdc28aQ8CEI3 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Ccdc28aQ8CEI3 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ccdc28aQ8CEI3 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Ccdc28aQ8CEI3 Gm4954-201ENSMUST00000135069 1601 ntBASIC5.67□□□□□ -1.5
Ccdc28aQ8CEI3 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Ccdc28aQ8CEI3 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ccdc28aQ8CEI3 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ccdc28aQ8CEI3 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Ccdc28aQ8CEI3 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Ccdc28aQ8CEI3 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC5.67□□□□□ -1.5
Ccdc28aQ8CEI3 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Ccdc28aQ8CEI3 Gm45183-201ENSMUST00000207937 1497 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 116 ms