Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm6223-201ENSMUST00000178436 871 ntBASIC7.79□□□□□ -1.16
Usp47Q8BY87 Gm27039-201ENSMUST00000182438 962 ntBASIC7.79□□□□□ -1.16
Usp47Q8BY87 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Usp47Q8BY87 AC107757.1-201ENSMUST00000226780 357 ntBASIC7.79□□□□□ -1.16
Usp47Q8BY87 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Usp47Q8BY87 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Usp47Q8BY87 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Usp47Q8BY87 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC7.79□□□□□ -1.16
Usp47Q8BY87 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Usp47Q8BY87 Gm43750-201ENSMUST00000199027 2493 ntBASIC7.79□□□□□ -1.16
Usp47Q8BY87 Gm42600-201ENSMUST00000202081 3588 ntBASIC7.78□□□□□ -1.16
Usp47Q8BY87 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Usp47Q8BY87 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Usp47Q8BY87 Gm43567-201ENSMUST00000197581 1978 ntBASIC7.78□□□□□ -1.16
Usp47Q8BY87 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Usp47Q8BY87 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Usp47Q8BY87 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Usp47Q8BY87 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC7.78□□□□□ -1.16
Usp47Q8BY87 Gm25758-201ENSMUST00000103987 129 ntBASIC7.78□□□□□ -1.16
Usp47Q8BY87 Mir1188-201ENSMUST00000116756 120 ntBASIC7.78□□□□□ -1.16
Usp47Q8BY87 Gm13007-201ENSMUST00000121866 365 ntBASIC7.78□□□□□ -1.16
Usp47Q8BY87 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC7.78□□□□□ -1.16
Usp47Q8BY87 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC7.78□□□□□ -1.16
Usp47Q8BY87 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Usp47Q8BY87 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC7.78□□□□□ -1.16
Usp47Q8BY87 Gm26765-201ENSMUST00000180844 692 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Usp47Q8BY87 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC7.78□□□□□ -1.16
Usp47Q8BY87 Gm18422-201ENSMUST00000203663 1032 ntBASIC7.78□□□□□ -1.16
Usp47Q8BY87 Gm17984-201ENSMUST00000205286 859 ntBASIC7.78□□□□□ -1.16
Usp47Q8BY87 Gm45870-201ENSMUST00000211269 601 ntBASIC7.78□□□□□ -1.16
Usp47Q8BY87 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC7.78□□□□□ -1.16
Usp47Q8BY87 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC7.78□□□□□ -1.16
Usp47Q8BY87 Olfr307-201ENSMUST00000069279 1012 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Usp47Q8BY87 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Usp47Q8BY87 Gm8878-201ENSMUST00000173552 1725 ntBASIC7.78□□□□□ -1.16
Usp47Q8BY87 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Usp47Q8BY87 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Usp47Q8BY87 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Usp47Q8BY87 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Usp47Q8BY87 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Usp47Q8BY87 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.16
Usp47Q8BY87 Gm43314-201ENSMUST00000196744 2231 ntBASIC7.77□□□□□ -1.16
Usp47Q8BY87 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Usp47Q8BY87 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC7.77□□□□□ -1.17
Usp47Q8BY87 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Usp47Q8BY87 AC124516.3-201ENSMUST00000221302 3613 ntBASIC7.77□□□□□ -1.17
Usp47Q8BY87 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Usp47Q8BY87 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Usp47Q8BY87 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Usp47Q8BY87 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC7.77□□□□□ -1.17
Usp47Q8BY87 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Usp47Q8BY87 Gm13333-201ENSMUST00000119424 781 ntBASIC7.77□□□□□ -1.17
Usp47Q8BY87 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC7.77□□□□□ -1.17
Usp47Q8BY87 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Usp47Q8BY87 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Usp47Q8BY87 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC7.77□□□□□ -1.17
Usp47Q8BY87 Gm24363-201ENSMUST00000158440 311 ntBASIC7.77□□□□□ -1.17
Usp47Q8BY87 Gm8941-201ENSMUST00000181451 899 ntBASIC7.77□□□□□ -1.17
Usp47Q8BY87 Mir6516-201ENSMUST00000196236 110 ntBASIC7.77□□□□□ -1.17
Usp47Q8BY87 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Usp47Q8BY87 AC155808.1-201ENSMUST00000219288 409 ntBASIC7.77□□□□□ -1.17
Usp47Q8BY87 AC131745.2-201ENSMUST00000225736 565 ntBASIC7.77□□□□□ -1.17
Usp47Q8BY87 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Usp47Q8BY87 Gm23459-201ENSMUST00000083259 131 ntBASIC7.77□□□□□ -1.17
Usp47Q8BY87 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Usp47Q8BY87 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC7.77□□□□□ -1.17
Usp47Q8BY87 Gm44424-201ENSMUST00000203438 1826 ntBASIC7.77□□□□□ -1.17
Usp47Q8BY87 Zfp758-202ENSMUST00000088765 2973 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
Usp47Q8BY87 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Usp47Q8BY87 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
Usp47Q8BY87 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Usp47Q8BY87 AC125487.2-201ENSMUST00000219810 1300 ntBASIC7.76□□□□□ -1.17
Usp47Q8BY87 Gm24789-201ENSMUST00000104282 131 ntBASIC7.76□□□□□ -1.17
Usp47Q8BY87 Gm6305-201ENSMUST00000121027 1012 ntBASIC7.76□□□□□ -1.17
Usp47Q8BY87 Gm11677-201ENSMUST00000121349 977 ntBASIC7.76□□□□□ -1.17
Usp47Q8BY87 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Usp47Q8BY87 Gm10269-201ENSMUST00000165229 372 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Usp47Q8BY87 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC7.76□□□□□ -1.17
Usp47Q8BY87 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC7.76□□□□□ -1.17
Usp47Q8BY87 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC7.76□□□□□ -1.17
Usp47Q8BY87 Gm43794-201ENSMUST00000200971 692 ntBASIC7.76□□□□□ -1.17
Usp47Q8BY87 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC7.76□□□□□ -1.17
Usp47Q8BY87 AC151971.3-201ENSMUST00000214694 404 ntBASIC7.76□□□□□ -1.17
Usp47Q8BY87 Gm6474-201ENSMUST00000223250 699 ntBASIC7.76□□□□□ -1.17
Usp47Q8BY87 AC154806.4-201ENSMUST00000227406 439 ntBASIC7.76□□□□□ -1.17
Usp47Q8BY87 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Usp47Q8BY87 Olfr878-201ENSMUST00000086061 1065 ntBASIC7.76□□□□□ -1.17
Usp47Q8BY87 Gm37033-201ENSMUST00000193199 7350 ntBASIC7.76□□□□□ -1.17
Usp47Q8BY87 Gm20644-201ENSMUST00000176721 2063 ntBASIC7.76□□□□□ -1.17
Usp47Q8BY87 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
Usp47Q8BY87 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Usp47Q8BY87 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Usp47Q8BY87 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Usp47Q8BY87 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Usp47Q8BY87 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Usp47Q8BY87 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Usp47Q8BY87 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Usp47Q8BY87 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC7.75□□□□□ -1.17
Usp47Q8BY87 Gm37137-201ENSMUST00000195138 2684 ntBASIC7.75□□□□□ -1.17
Usp47Q8BY87 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC7.75□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms