Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm37078-201ENSMUST00000193314 2009 ntBASIC8.01□□□□□ -1.13
Usp40Q8BWR4 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Usp40Q8BWR4 Gm10845-202ENSMUST00000228217 3389 ntBASIC8.01□□□□□ -1.13
Usp40Q8BWR4 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
Usp40Q8BWR4 Akr1c20-201ENSMUST00000078239 1317 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Usp40Q8BWR4 Gm38377-201ENSMUST00000193253 3772 ntBASIC8□□□□□ -1.13
Usp40Q8BWR4 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Usp40Q8BWR4 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Usp40Q8BWR4 Gm37221-201ENSMUST00000194472 3007 ntBASIC8□□□□□ -1.13
Usp40Q8BWR4 Gm43745-201ENSMUST00000198085 1883 ntBASIC8□□□□□ -1.13
Usp40Q8BWR4 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC8□□□□□ -1.13
Usp40Q8BWR4 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC8□□□□□ -1.13
Usp40Q8BWR4 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC8□□□□□ -1.13
Usp40Q8BWR4 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
Usp40Q8BWR4 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC8□□□□□ -1.13
Usp40Q8BWR4 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Usp40Q8BWR4 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC8□□□□□ -1.13
Usp40Q8BWR4 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC8□□□□□ -1.13
Usp40Q8BWR4 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC8□□□□□ -1.13
Usp40Q8BWR4 Gm4989-201ENSMUST00000118711 749 ntBASIC8□□□□□ -1.13
Usp40Q8BWR4 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC8□□□□□ -1.13
Usp40Q8BWR4 Olfr213-201ENSMUST00000121958 984 ntAPPRIS P1 BASIC8□□□□□ -1.13
Usp40Q8BWR4 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC8□□□□□ -1.13
Usp40Q8BWR4 Gm24735-201ENSMUST00000158859 118 ntBASIC8□□□□□ -1.13
Usp40Q8BWR4 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
Usp40Q8BWR4 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
Usp40Q8BWR4 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
Usp40Q8BWR4 Gm17046-201ENSMUST00000168078 850 ntBASIC8□□□□□ -1.13
Usp40Q8BWR4 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
Usp40Q8BWR4 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC8□□□□□ -1.13
Usp40Q8BWR4 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC8□□□□□ -1.13
Usp40Q8BWR4 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
Usp40Q8BWR4 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Usp40Q8BWR4 Gm6113-201ENSMUST00000180319 639 ntBASIC8□□□□□ -1.13
Usp40Q8BWR4 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC8□□□□□ -1.13
Usp40Q8BWR4 Gm27985-201ENSMUST00000185112 378 ntBASIC8□□□□□ -1.13
Usp40Q8BWR4 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC8□□□□□ -1.13
Usp40Q8BWR4 Gm43779-201ENSMUST00000196691 829 ntBASIC8□□□□□ -1.13
Usp40Q8BWR4 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC8□□□□□ -1.13
Usp40Q8BWR4 Igkv3-8-201ENSMUST00000197635 339 ntBASIC8□□□□□ -1.13
Usp40Q8BWR4 Gm43743-202ENSMUST00000198353 491 ntBASIC8□□□□□ -1.13
Usp40Q8BWR4 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC8□□□□□ -1.13
Usp40Q8BWR4 Gm18645-202ENSMUST00000212222 760 ntBASIC8□□□□□ -1.13
Usp40Q8BWR4 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC8□□□□□ -1.13
Usp40Q8BWR4 Gm18160-201ENSMUST00000214279 827 ntBASIC8□□□□□ -1.13
Usp40Q8BWR4 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC8□□□□□ -1.13
Usp40Q8BWR4 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC8□□□□□ -1.13
Usp40Q8BWR4 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC8□□□□□ -1.13
Usp40Q8BWR4 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC8□□□□□ -1.13
Usp40Q8BWR4 AC154636.1-201ENSMUST00000223226 126 ntBASIC8□□□□□ -1.13
Usp40Q8BWR4 AC123665.6-201ENSMUST00000228568 538 ntBASIC8□□□□□ -1.13
Usp40Q8BWR4 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Usp40Q8BWR4 Pikfyve-201ENSMUST00000081154 11237 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
Usp40Q8BWR4 Lingo2-202ENSMUST00000098151 2781 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Usp40Q8BWR4 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC8□□□□□ -1.13
Usp40Q8BWR4 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC8□□□□□ -1.13
Usp40Q8BWR4 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Usp40Q8BWR4 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Usp40Q8BWR4 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Usp40Q8BWR4 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC8□□□□□ -1.13
Usp40Q8BWR4 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC8□□□□□ -1.13
Usp40Q8BWR4 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC8□□□□□ -1.13
Usp40Q8BWR4 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC8□□□□□ -1.13
Usp40Q8BWR4 Gm16794-203ENSMUST00000185324 1490 ntTSL 1 (best) BASIC8□□□□□ -1.13
Usp40Q8BWR4 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Usp40Q8BWR4 Gm37531-201ENSMUST00000191628 5415 ntBASIC8□□□□□ -1.13
Usp40Q8BWR4 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC7.99□□□□□ -1.13
Usp40Q8BWR4 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Usp40Q8BWR4 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Usp40Q8BWR4 Gm43178-201ENSMUST00000197257 1386 ntBASIC7.99□□□□□ -1.13
Usp40Q8BWR4 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Usp40Q8BWR4 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC7.99□□□□□ -1.13
Usp40Q8BWR4 Olfr378-201ENSMUST00000069790 1508 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
Usp40Q8BWR4 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC7.99□□□□□ -1.13
Usp40Q8BWR4 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Usp40Q8BWR4 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Usp40Q8BWR4 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Usp40Q8BWR4 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Usp40Q8BWR4 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Usp40Q8BWR4 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Usp40Q8BWR4 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Usp40Q8BWR4 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Usp40Q8BWR4 Gm6427-201ENSMUST00000118721 979 ntBASIC7.99□□□□□ -1.13
Usp40Q8BWR4 Gm13118-201ENSMUST00000120402 549 ntBASIC7.99□□□□□ -1.13
Usp40Q8BWR4 Gm12094-201ENSMUST00000121781 472 ntBASIC7.99□□□□□ -1.13
Usp40Q8BWR4 A230083N12Rik-201ENSMUST00000126646 572 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Usp40Q8BWR4 Gm22596-201ENSMUST00000157601 316 ntBASIC7.99□□□□□ -1.13
Usp40Q8BWR4 Gm26489-201ENSMUST00000157880 264 ntBASIC7.99□□□□□ -1.13
Usp40Q8BWR4 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC7.99□□□□□ -1.13
Usp40Q8BWR4 Mir3110-201ENSMUST00000175053 80 ntBASIC7.99□□□□□ -1.13
Usp40Q8BWR4 Gm25037-201ENSMUST00000175418 110 ntBASIC7.99□□□□□ -1.13
Usp40Q8BWR4 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
Usp40Q8BWR4 Gm27155-201ENSMUST00000183716 898 ntBASIC7.99□□□□□ -1.13
Usp40Q8BWR4 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC7.99□□□□□ -1.13
Usp40Q8BWR4 Gm8151-201ENSMUST00000184817 871 ntBASIC7.99□□□□□ -1.13
Usp40Q8BWR4 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC7.99□□□□□ -1.13
Usp40Q8BWR4 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC7.99□□□□□ -1.13
Usp40Q8BWR4 Mrgpra18-ps-201ENSMUST00000188059 907 ntBASIC7.99□□□□□ -1.13
Usp40Q8BWR4 Gm37839-201ENSMUST00000192576 492 ntTSL 5 BASIC7.99□□□□□ -1.13
Usp40Q8BWR4 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC7.99□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 91.5 ms