Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ddx55Q6ZPL9 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ddx55Q6ZPL9 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ddx55Q6ZPL9 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ddx55Q6ZPL9 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC6.76□□□□□ -1.33
Ddx55Q6ZPL9 Gm14245-201ENSMUST00000118939 1843 ntBASIC6.76□□□□□ -1.33
Ddx55Q6ZPL9 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC6.76□□□□□ -1.33
Ddx55Q6ZPL9 Olfr616-202ENSMUST00000214806 1641 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Ddx55Q6ZPL9 Olfr616-203ENSMUST00000217293 1627 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Ddx55Q6ZPL9 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Ddx55Q6ZPL9 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ddx55Q6ZPL9 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ddx55Q6ZPL9 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC6.75□□□□□ -1.33
Ddx55Q6ZPL9 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ddx55Q6ZPL9 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ddx55Q6ZPL9 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ddx55Q6ZPL9 Gm42611-201ENSMUST00000199446 3407 ntBASIC6.75□□□□□ -1.33
Ddx55Q6ZPL9 AC156636.2-201ENSMUST00000218845 4557 ntBASIC6.75□□□□□ -1.33
Ddx55Q6ZPL9 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Ddx55Q6ZPL9 Gm42892-201ENSMUST00000196227 3973 ntBASIC6.75□□□□□ -1.33
Ddx55Q6ZPL9 Olfr651-203ENSMUST00000216904 1598 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Ddx55Q6ZPL9 AC154841.1-201ENSMUST00000227263 1479 ntBASIC6.75□□□□□ -1.33
Ddx55Q6ZPL9 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
Ddx55Q6ZPL9 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ddx55Q6ZPL9 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Ddx55Q6ZPL9 Gm14755-201ENSMUST00000118037 384 ntBASIC6.75□□□□□ -1.33
Ddx55Q6ZPL9 Gm12074-201ENSMUST00000120189 219 ntBASIC6.75□□□□□ -1.33
Ddx55Q6ZPL9 Gm14679-201ENSMUST00000121536 722 ntBASIC6.75□□□□□ -1.33
Ddx55Q6ZPL9 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC6.75□□□□□ -1.33
Ddx55Q6ZPL9 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Ddx55Q6ZPL9 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Ddx55Q6ZPL9 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC6.75□□□□□ -1.33
Ddx55Q6ZPL9 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC6.75□□□□□ -1.33
Ddx55Q6ZPL9 Gm16456-201ENSMUST00000174431 920 ntBASIC6.75□□□□□ -1.33
Ddx55Q6ZPL9 Mir6417-201ENSMUST00000183815 116 ntBASIC6.75□□□□□ -1.33
Ddx55Q6ZPL9 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC6.75□□□□□ -1.33
Ddx55Q6ZPL9 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC6.75□□□□□ -1.33
Ddx55Q6ZPL9 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC6.75□□□□□ -1.33
Ddx55Q6ZPL9 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC6.75□□□□□ -1.33
Ddx55Q6ZPL9 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Ddx55Q6ZPL9 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC6.75□□□□□ -1.33
Ddx55Q6ZPL9 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC6.75□□□□□ -1.33
Ddx55Q6ZPL9 Rpl29-ps2-202ENSMUST00000220540 1165 ntTSL 5 BASIC6.75□□□□□ -1.33
Ddx55Q6ZPL9 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC6.75□□□□□ -1.33
Ddx55Q6ZPL9 AC163651.2-202ENSMUST00000222628 1192 ntTSL 5 BASIC6.75□□□□□ -1.33
Ddx55Q6ZPL9 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Ddx55Q6ZPL9 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ddx55Q6ZPL9 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ddx55Q6ZPL9 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Ddx55Q6ZPL9 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Ddx55Q6ZPL9 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Ddx55Q6ZPL9 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Ddx55Q6ZPL9 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ddx55Q6ZPL9 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Ddx55Q6ZPL9 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ddx55Q6ZPL9 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
Ddx55Q6ZPL9 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC6.75□□□□□ -1.33
Ddx55Q6ZPL9 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC6.75□□□□□ -1.33
Ddx55Q6ZPL9 Gm43031-201ENSMUST00000198500 1887 ntBASIC6.75□□□□□ -1.33
Ddx55Q6ZPL9 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ddx55Q6ZPL9 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ddx55Q6ZPL9 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ddx55Q6ZPL9 Gm14827-201ENSMUST00000146644 3089 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ddx55Q6ZPL9 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ddx55Q6ZPL9 Gm43285-201ENSMUST00000196563 3592 ntBASIC6.74□□□□□ -1.33
Ddx55Q6ZPL9 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ddx55Q6ZPL9 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ddx55Q6ZPL9 Gm4989-201ENSMUST00000118711 749 ntBASIC6.74□□□□□ -1.33
Ddx55Q6ZPL9 Gm13488-201ENSMUST00000120419 179 ntBASIC6.74□□□□□ -1.33
Ddx55Q6ZPL9 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC6.74□□□□□ -1.33
Ddx55Q6ZPL9 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC6.74□□□□□ -1.33
Ddx55Q6ZPL9 Gm15780-201ENSMUST00000121283 935 ntBASIC6.74□□□□□ -1.33
Ddx55Q6ZPL9 Gm26487-201ENSMUST00000158022 94 ntBASIC6.74□□□□□ -1.33
Ddx55Q6ZPL9 Mir1963-201ENSMUST00000158594 59 ntBASIC6.74□□□□□ -1.33
Ddx55Q6ZPL9 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC6.74□□□□□ -1.33
Ddx55Q6ZPL9 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC6.74□□□□□ -1.33
Ddx55Q6ZPL9 Gm27039-201ENSMUST00000182438 962 ntBASIC6.74□□□□□ -1.33
Ddx55Q6ZPL9 Gm29284-201ENSMUST00000188363 255 ntBASIC6.74□□□□□ -1.33
Ddx55Q6ZPL9 Gm28429-201ENSMUST00000188521 363 ntBASIC6.74□□□□□ -1.33
Ddx55Q6ZPL9 Gm18702-201ENSMUST00000196923 588 ntBASIC6.74□□□□□ -1.33
Ddx55Q6ZPL9 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ddx55Q6ZPL9 Gm43295-201ENSMUST00000201439 412 ntBASIC6.74□□□□□ -1.33
Ddx55Q6ZPL9 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC6.74□□□□□ -1.33
Ddx55Q6ZPL9 Gm17992-201ENSMUST00000207346 1072 ntBASIC6.74□□□□□ -1.33
Ddx55Q6ZPL9 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC6.74□□□□□ -1.33
Ddx55Q6ZPL9 Olfr589-202ENSMUST00000218483 966 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Ddx55Q6ZPL9 Gm19256-201ENSMUST00000218550 231 ntBASIC6.74□□□□□ -1.33
Ddx55Q6ZPL9 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ddx55Q6ZPL9 AC159242.1-201ENSMUST00000225832 194 ntBASIC6.74□□□□□ -1.33
Ddx55Q6ZPL9 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Ddx55Q6ZPL9 Rnase2a-201ENSMUST00000061936 690 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ddx55Q6ZPL9 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC6.74□□□□□ -1.33
Ddx55Q6ZPL9 Gm24029-201ENSMUST00000083928 143 ntBASIC6.74□□□□□ -1.33
Ddx55Q6ZPL9 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Ddx55Q6ZPL9 Gm10845-202ENSMUST00000228217 3389 ntBASIC6.74□□□□□ -1.33
Ddx55Q6ZPL9 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC6.74□□□□□ -1.33
Ddx55Q6ZPL9 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ddx55Q6ZPL9 Gm9408-201ENSMUST00000197375 1505 ntBASIC6.74□□□□□ -1.33
Ddx55Q6ZPL9 Gm38224-201ENSMUST00000191648 2100 ntBASIC6.74□□□□□ -1.33
Ddx55Q6ZPL9 Gm15425-201ENSMUST00000119013 2711 ntBASIC6.74□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms